FFCP PHASE1:Hg19::chrX:154299690..154299717,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79184 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24185 | |||
|TSSclassifier=strong | |||
|UniProt=P46736 | |||
|association_with_transcript=0bp_to_ENST00000330045,ENST00000340647,NM_001018055,NM_001242640,NM_024332,uc004fna.2,uc004fnb.2,uc011mzy.1,uc011mzz.1_5end | |||
|description=CAGE_peak_2_at_BRCC3_5end | |||
|id=chrX:154299690..154299717,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.16e-10!172;CL:0000566!2.16e-10!172;CL:0000738!2.07e-09!140;CL:0002032!6.42e-09!165;CL:0000837!6.42e-09!165;CL:0000838!6.83e-09!52;CL:0000542!6.86e-09!53;CL:0000051!6.86e-09!53;CL:0000988!1.04e-07!182;CL:0000084!1.15e-07!25;CL:0000827!1.15e-07!25;CL:0002031!3.21e-07!124;CL:0000791!7.40e-07!18;CL:0000789!7.40e-07!18;CL:0002420!7.40e-07!18;CL:0002419!7.40e-07!18;CL:0000790!7.40e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.09e-08;25!CL:0000791;3.79e-07;18!CL:0000789;3.79e-07;18!CL:0002419;3.79e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.31e-10,168;CL:0000738,1.44e-09,136;CL:0000542,2.85e-09,53;CL:0000051,2.85e-09,53;CL:0000838,2.86e-09,52;CL:0002032,1.37e-08,161;CL:0000837,1.37e-08,161;CL:0000084,2.09e-08,25;CL:0000827,2.09e-08,25;CL:0000988,4.42e-08,177;CL:0000791,8.63e-08,18;CL:0000789,8.63e-08,18;CL:0002420,8.63e-08,18;CL:0002419,8.63e-08,18;CL:0000790,8.63e-08,18;CL:0002031,2.47e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.79e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.704772020479856,0,0.446961094427288,0.872338524100369,2.53299878168311,0,1.30592814099919,0.245733936501509,1.39560233594486,0.655324116390517,0.263766978228454,0.990130823680373,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.369363174230364,0.204000691244253,0,3.14859585844162,2.6006140763848,2.51085279189606,3.20936304141395,3.85872770414745,3.54198515911557,0.786728553697808,1.91914699048606,1.08371286321253,1.83884244895785,0.6024118375565,1.10926203050036,0.852139206383318,1.27952309238679,0.880801318004542,0.553995408531877,1.40381113229099,1.51907609501096,1.56740831967947,1.29557466407592,1.54545340580512,1.45398238779565,1.13362783106643,0.970336244751265,0.464858073811369,1.6446715520873,1.23882548358041,0.28769239232215,0.256160706529101,0.47296445977717,1.37898272294647,0,1.35426486594342,0.752969358170419,0.272906150057846,0.449446968890169,0.612167784741805,0.962787081228281,0,0.989553900560148,0.398927315243264,0.426224750532694,0.290209238628584,1.13477044938228,0.622822248995575,0.251248665256743,0.521482918420201,0.868755378820466,1.81619850790011,0,0,1.05627643155971,1.70083439972035,1.67726916406701,1.68492946719743,2.10247649978109,2.73233497385036,2.85012743741249,2.18808344918999,2.19196984517561,1.75996244461323,1.63841583378639,0.889509253863555,1.28019066769952,2.00197993518006,0,1.98313461835459,1.90810750907073,0,1.17447437874188,1.14681968437569,0,1.12101712596307,2.63384084775077,2.16380747125216,2.75107533924415,2.2616164889946,2.50779743086017,1.30368906653436,1.89379122293893,3.89653456815823,2.22820913770347,3.53527088969805,1.99380505125259,2.97884250141517,2.43373507478783,2.47112760363769,1.97325485524411,0.552700035571697,2.60822777161547,3.70716407905151,2.94294910898684,4.18142095219907,3.05935225283429,1.91610246800961,1.71813722741315,3.28925599625354,1.91139248594458,0,4.75226022224187,2.86092726247768,3.07167866770604,1.24930726552346,2.60454977248419,3.28451198768419,2.62088766192152,2.94184215361858,1.88271725047639,2.43806866313962,1.34140171940727,1.79007586580942,1.44575660953827,0.50133791063589,0.579386075843295,0,0.486634870302636,0.756278537312543,1.33037638477538,1.40535657109002,0.458426764241994,0.364295288292542,0.741568885568859,2.59637914923747,2.08955684759121,1.99436940778298,1.43094374583205,5.14795419702115,4.82894751728434,0.198762407366705,0,0,0,1.25849830862972,1.37559020970034,0.626984899610432,0.775250277507987,1.77883131343355,0.66944122552934,0.402829317109147,0,0.976248230192678,2.20597848207521,0,0.625098097988558,1.57170560838319,2.47745257063309,0,0,0.183201743930407,2.63560834872127,7.75560528296651,0.436094052142534,0.993943903390637,1.51956613997496,1.19168262731897,0.573673241497627,1.41867352879343,0,0,0.74000264525148,2.17847724779836,1.0776853765575,1.63461903113459,0.605429710579726,1.15235184896,0,1.87296046098192,0.570471821544449,1.19558944441441,2.58355897016283,2.26622122115384,1.40450806702248,1.22492502752936,0.859840221182376,1.75653827998801,0,0.741800787835671,0,0.718618141816238,1.34668891163253,1.25118519871964,1.6623846929051,0.877955241761676,0.612975591598039,0.300476117813194,0.680593098960126,1.07633781413317,0,1.48352330811693,1.20036438433761,1.03052529238439,1.03056216018252,0.930584281657949,0.506328996723799,1.26668106709558,0.504867548488229,0.552299391853796,1.45481451136931,1.42003837006646,1.41052937518696,0.508681776931463,0.966304265816484,1.09098448236334,4.58887352622406,1.09776335516636,0.927708378250397,0.348581828608555,0.621966330092223,0.504641701751257,1.45990943630332,1.56449532329816,0,0,0.928735856063958,0.721879481669586,2.48444280083672,2.86593973132773,0.964044119533928,3.19852520923942,1.74303555273925,3.08451804844426,2.42696354688296,2.35465758150415,3.07797725557112,0.738155454624648,0,0,0,0,0.982827216677626,1.18157981336281,3.09024169590255,0.737930631258681,2.57351715447788,0.878002283269004,0,1.70899253099772,1.85176890317059,0.325808305310325,0,1.44331342025273,1.507095264676,0.70445216541493,0.433099343283221,0.462985512576611,1.14152491340759,0.790204397959275,0,1.72351904261178,2.80805118167085,2.97262324577457,0.93733833986777,2.18376766658517,1.70130116690864,1.16426079513703,1.45316969256981,1.15014803749563,1.97065295158377,0.792435906119034,1.86595303986695,3.17063897517315,1.64115163454294,1.52394946301206,1.14596527667483,1.17217447210047,0,1.02827492703324,0.300343057843917,1.42913216315289,0.784917590417525,0.43596006883328,1.466765716419,0.258543431515556,0,1.690605505112,0.797814349754612,0,0.514414748524284,0,0.266422179016099,0.57191197463259,0,0,0.65147236858747,1.06617584622764,2.37585561880029,1.50719688529793,0,1.09970290300263,1.2162378064119,1.50677127429638,0,1.19812427745791,0,2.85273810081437,0.723906533337896,1.02738161275192,1.61154866915906,3.47463946379935,0.985153801009636,1.94064817373566,2.18183161675572,1.52456774533478,1.30139853857622,3.09315525111078,2.17771144934653,1.91381625495949,5.24304916763028,2.99161459204025,3.31532410748828,0.613457458595699,1.50051156317903,0.813795071099207,0.623912584592421,0.713715955188647,1.10391690523754,0.937131319941706,0,0,0,1.32845119707087,0.553107505625109,0.781952530212746,0,0,2.06768026122887,1.50999940573032,1.921096040462,0,0,0.30239029332968,0,0.460385919864187,1.40330047216537,1.40953064181271,0.511707249066704,1.12597744800525,1.48418066444991,1.3878872442239,0.532685175939381,1.39616165223476,0,1.85936605535935,1.20859449591622,1.20303882181971,1.93370076765382,0.459257792658427,0.546273504020151,0.786746489756545,0.451199612907412,1.61732207919271,0,1.46139224653261,1.26661954671451,1.13733384070897,0.850468526382578,0.863663664408557,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0.223874754722178,1.31555925987561,2.87578996127391,2.05160100093111,0,0.325378394664303,0.515205058238611,2.1060976908219,1.73269949833235,0.574265537996172,0,1.6068392984416,0.676695028044854,1.54048617114644,1.5350367472613,1.7918754422989,1.28904293841928,1.0151168573996,1.96021243057032,0.534192213880424,0.991709492165869,1.34533047155574,1.91419068741876,1.2138933702666,1.39453664789186,1.5740617341532,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,1.116475108079,1.89827654831236,0.38126038784765,0.255897791311334,1.28381696410176,0.318203247925937,1.56989728039846,0.899362287916574,0.54907405947211,0.824686816419805,0.606547444719948,0,0.842516912477962,0,0.731140468893853,0,1.22849920267187,0.707027159768564,0,0,0.66343897524122,1.31535265576129,0.578775534266688,0,0.405820753925408,0.30982349809975,0,1.00387946542836,0.294747123039363,0.35667105148125,1.77380532035299,1.05553817648832,0,0,1.04980416073495,0.673554789078584,0,0,0.659006605437454,0,0,0,0.459446800413919,3.04468565539302,3.0585488285695,2.27858874869665,2.38231775457789,3.70226045777575,3.24236655596359,3.7802200606668,1.58625035258854,0.640944426764839,0,0.980160863924127,1.30062222588003,0.721346064882224,2.27653898714925,2.55082036366116,0.399158742865633,0.957526850661834,1.48171507906718,0.973865820823666,1.12318871245384,4.79292825969704,1.72347885350326,0,1.52362600021443,1.4452926759333,1.61439765752838,1.27753871307098,1.03051603426729,0.614481528616916,2.68411329470899,2.0021897005429,0.781552381608161,1.11362469558097,0,1.89318974933188,1.33228787199128,0,1.49712432326576,1.61158997199083,3.27673408723686,1.11443384277478,0,2.86493381685228,1.18785872333055,1.84296421259539,3.97659059106519,1.1253553312841,2.11486539543521,1.31843099381408,0.63337622438398,1.19548792950642,1.10513566212459,1.25966373927138,0.920418142519393,1.84627208191604,0.311039587661807,3.23526064130377,1.25314822272926,4.09257896181497,0.887790650732402,0,2.22273980289274,0.969332746095218,1.48428957058962,0,1.5625665665114,4.63537999979837,1.44999915086959,1.4793148277115,1.77977555204936,0.472775363535873,1.37897349296586,2.33283690706603,1.04174996959975,0,1.92954301800653,0,1.99042667876204,1.77328571372128,0.658156191461918,0.10893846351899,1.67308493134324,0.923403102045565,1.36730467016401,1.84451123510448,1.25660702173681,1.08647371922008,0.31900115973192,1.19076871422421,0,2.04386596391473,0.941881538370149,1.49590513710141,2.03036094555463,2.15668787749514,1.34257269580674,0.948768663620925,2.54298526368606,0.421996129056054,0.652931232636591,0.848118428603645,2.81305231664718,0.995261931078505,0.884575645033392,2.4441205797345,0,0.370691816839509,0.313265848516366,0.539209063845416,0,1.87411556580271,2.91927662745066,2.15231080825299,2.91336455440911,1.97292201424695,1.20990716048664,1.22429104652196,2.21153028699708,0.751617097072463,2.59220478493118,1.99396161812156,0,0.313932918407225,0,0,0.832048038078832,1.73559738335131,3.13575671726008,2.43765778425127,1.22308667769421,1.0319161948297,1.16107597546902,1.90032224424082,1.31384731285135,1.45483524732629,1.3238419003725,0.677942222341597,0.685209623233754,0.993573058514948,1.58276989889697,0.977756913674015,0.561111741760736,0.640358984218058,0.599428828746391,1.15272333723285,1.37443915399099,0.514784993585894,2.3048767678104,0.99402028452346,0.942776138467182,1.49494626680975,0.836822770498666,0.917983958726896,0,0.600420288709789,0.684526894459965,3.83239764200917,0,2.62887354279315,0,0.229160424011684,1.43574604915363,0.998395002494955,0,0.223171457441873,0.470284307407084,0.720599767084807,1.16495949527454,2.59984501613838,2.14281231791033,2.02210631562555,0.984274815147488,2.28617996577618,0,0.817220436669454,0.964518890790115,0.962776056180637,2.07720169014593,2.0247650239635,1.5476039091159,1.21499113316049,1.0063040627978,1.02447419488958,0.314727528809989,0.633602019116439,0.35857467866569,1.72723677587501,0.714695326373367,0.662091970365432,3.5597595271665,0,0,0.326587360109409,3.59190574687462,0.903017728242729,1.19271615249795,1.58636928128176,0.58620893471233,0,1.42211251997706,1.05786081394152,2.22412889249628,0.704815022316672,0.533937062838473,0.628817220398664,0.828478110694391,1.9846640872478,2.76656284657122,4.26274094333136,1.27668251554036,2.1760712134779,0.7520696820681,1.53172788381731,0.983617892129413,3.29813602125492,0,0.976210119215705,1.1267183763585,0,1.55300672151593,0.558867626472451,1.10678907948985,1.74972571146949,0.909894705249887,1.7127920012698,0.941063278792687,0.936669811613763,1.30428925749743,1.19403842309499,1.16856654923612,3.32883516901568,1.32582103692562,0,0,0.457680136793847,1.36107831386915,0.466311601748341,1.33069634990671,1.43367090447332,0,0.776314784381297,1.24411862352257,0.797525143673985,0.521745061811734,0.901545653983311,1.52322084867518,1.62748293281865,0.909243296012797,1.28892668450986,0.928067519756987,0.398095888698616,0,1.03018711554838,0,0,0.963099152036517,0,0.260994291965212,0.906823702049089,1.15761237161917,0.489473409012935,0.71635536432595,0.308801447160972,0.219284049578707,0.706756583783524,0.964570191354574,0.506827321959218,1.02496607435179,1.38172136692479,0,1.10606748921385,0.194860308839388,0.930053882193542,0.327130788511688,0.655219697692825,0.983091635014877,3.38099397373803,0.79994958341972,2.66729324235352,1.03328987796489,1.70254786070051,1.28874165176289,1.53867458491389,1.86623178009892,1.27894371303652,1.61737217095023,1.41539347670307,1.09209638192014,2.0367903594483,0.850299680406731,1.11542187833102,2.79322458986622,0.636008701306837,1.57723490002507,0.80057074828547,1.05802783107205,0.6124909547064,1.22035527683273,0,1.27707087245721,0.82046545696302,0.252071696221718,0.829887029570615,2.09918339321406,0,2.15924980702256,1.1796972334774,2.38457178078183,1.38630799380406,0.762764190934334,1.3807198521202,0.596748666348824,0.902523940191087,2.62216589314576,3.12605604493237,1.04762677792569,1.31017534008077,1.6264169483875,0.810451015420736,0.781078098613847,1.44680757550829,0.697573912132975,1.64092442705466,1.64477330057155,0.496211178389294,1.05522746615772,1.91643641459393,1.07140367175657,3.36283722218824,0,0.91064876540519,0.354809480650555,0.576169937778896,1.20041606606193,1.63127359144396,0.920818829879887,0.472775363535873,2.11339663594931,0.78493092850514,2.51384943865603,1.96190514319652,1.82631744101899,0.647782773655864,1.9110067515482,0.857718530119876,1.73814972905999,1.62737995515375,1.73858272302579,2.40513409419076,0.62164849248911,0.85359238546975,0,2.15113679410139,0.709992004383392,1.02256085710989,0.846774100381858,2.97838929107265,0.62041277132864,2.8666168169323,0.447421727191169,2.15930513953535,3.04794812455674,0.647428837187895,1.53994210284371,0,1.45713297917742,1.40363678077263,0.397901550322736,0.356760272332706,1.1294608203896,1.42922671769058,1.50962843566674,1.69783147837478,1.31135736302374,4.23285566725371,0.245148321753905,2.12108892391463,1.17785080268967,1.78227840196252,0,0.849635573439084,1.12780701575824,0.709036767709349,2.49852889812322,0.71421575442263,0.352894871715692,2.40724100067505,1.46067277649303,1.83491713361816,0.860037498908708,1.41994405973866,0.475940431336403,1.74540276136151,1.5870805215462,0.371995018166751,0.924351257262837,0.432626562123789,0.756998549010474,3.60576387480195,1.39368351112581,2.03977659483963,1.06886962106224,1.28652859348783,0.50141507858475,0.378893491091197,0,0.829169439458779,0.930896962757057,1.91910583710883,1.90451545170992,2.58355639344024,3.28995985768047,1.6819779387092,1.0820016907288,1.41482032270754,1.52401723527873,0.684466602170562,1.0776328482334,1.29099969706817,1.99596213927608,1.62806537221949,0.640364075266293,0,0.898252021065869,0,0.366724332548599,1.22068853494722,0.665756774185513,1.00636896795513,1.60284246151616 | |||
|short_description=p2@BRCC3 | |||
}} |
Revision as of 07:37, 23 January 2014
Short description: | p2@BRCC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BRCC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000330045, ENST00000340647, NM_001018055, NM_001242640, NM_024332, uc004fna.2, uc004fnb.2, uc011mzy.1, uc011mzz.1_5end |
EntrezGene: | BRCC3 |
HGNC: | 24185 |
UniProt: | P46736 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.31e-10 | 168 |
leukocyte | 1.44e-09 | 136 |
lymphocyte | 2.85e-09 | 53 |
common lymphoid progenitor | 2.85e-09 | 53 |
lymphoid lineage restricted progenitor cell | 2.86e-09 | 52 |
hematopoietic oligopotent progenitor cell | 1.37e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-08 | 161 |
T cell | 2.09e-08 | 25 |
pro-T cell | 2.09e-08 | 25 |
hematopoietic cell | 4.42e-08 | 177 |
mature alpha-beta T cell | 8.63e-08 | 18 |
alpha-beta T cell | 8.63e-08 | 18 |
immature T cell | 8.63e-08 | 18 |
mature T cell | 8.63e-08 | 18 |
immature alpha-beta T cell | 8.63e-08 | 18 |
hematopoietic lineage restricted progenitor cell | 2.47e-07 | 120 |