FFCP PHASE1:Hg19::chr13:113344345..113344359,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=23250 | |EntrezGene=entrezgene:23250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=13552 | |HGNC=HGNC:13552 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P98196,E9PEJ6,Q659C3,Q6PJ25 | |UniProt=uniprot:P98196,uniprot:E9PEJ6,uniprot:Q659C3,uniprot:Q6PJ25 | ||
|association_with_transcript=-283bp_to_ENST00000283558,ENST00000375630,ENST00000375645,ENST00000487903,NM_015205,NM_032189,uc001vsi.3,uc001vsj.3_5end | |association_with_transcript=-283bp_to_ENST00000283558,ENST00000375630,ENST00000375645,ENST00000487903,NM_015205,NM_032189,uc001vsi.3,uc001vsj.3_5end | ||
|cluster_id=chr13:113344345..113344359,+ | |||
|coexpression_cluster_id=C3354 | |coexpression_cluster_id=C3354 | ||
|description=CAGE_peak_4_at_ATP11A_5end | |description=CAGE_peak_4_at_ATP11A_5end |
Revision as of 14:41, 24 July 2015
Short description: | p4@ATP11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATP11A_5end |
Coexpression cluster: | C3354_gall_bronchogenic_Eosinophils_Neutrophils_lung_CD14_granulocyte |
Association with transcript: | -283bp_to_ENST00000283558, ENST00000375630, ENST00000375645, ENST00000487903, NM_015205, NM_032189, uc001vsi.3, uc001vsj.3_5end |
EntrezGene: | 23250 |
HGNC: | 13552 |
UniProt: | P98196E9PEJ6Q659C3Q6PJ25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@ATP11A |
---|
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.82e-23 | 72 |
defensive cell | 3.64e-19 | 48 |
phagocyte | 3.64e-19 | 48 |
classical monocyte | 1.06e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-18 | 42 |
monopoietic cell | 2.13e-17 | 59 |
monocyte | 2.13e-17 | 59 |
monoblast | 2.13e-17 | 59 |
promonocyte | 2.13e-17 | 59 |
granulocyte monocyte progenitor cell | 2.97e-17 | 67 |
Showing 1 to 10 of 24 entries
Ontology term | p-value | n |
---|---|---|
adult organism | 9.56e-16 | 114 |
hemolymphoid system | 4.98e-15 | 108 |
hematopoietic system | 8.62e-15 | 98 |
blood island | 8.62e-15 | 98 |
immune system | 6.46e-14 | 93 |
bone marrow | 8.60e-13 | 76 |
bone element | 4.89e-12 | 82 |
neural tube | 1.39e-11 | 56 |
neural rod | 1.39e-11 | 56 |
future spinal cord | 1.39e-11 | 56 |
Showing 1 to 10 of 24 entries