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FFCP PHASE1:Mm9::chr13:98976106..98976141,-: Difference between revisions

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{{FFCP|EntrezGene=110596|HGNC=|UniProt=G5E8P2,P97433,B2RQQ2|association_with_transcript=0bp_to_ENSMUST00000109426,NM_012026,uc007roh.1_5end|description=CAGE_peak_1_at_Rgnef_5end|id=chr13:98976106..98976141,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!1.63e-09!27;UBERON:0005409!2.06e-09!59;UBERON:0000160!3.28e-09!43;UBERON:0000468!1.04e-08!333;UBERON:0001264!1.51e-07!12;UBERON:0003922!1.51e-07!12;UBERON:0002114!1.51e-07!12;UBERON:0003923!1.51e-07!12;UBERON:0003924!1.51e-07!12;UBERON:0003921!1.51e-07!12;UBERON:0001045!2.32e-07!13;UBERON:0000464!3.82e-07!57;UBERON:0002048!4.12e-07!14;UBERON:0000117!4.12e-07!14;UBERON:0000171!4.12e-07!14;UBERON:0000170!4.12e-07!14;UBERON:0005597!4.12e-07!14;UBERON:0000118!4.12e-07!14;UBERON:0005178!5.18e-07!17;UBERON:0005181!5.18e-07!17;UBERON:0002224!5.18e-07!17;UBERON:0000915!5.18e-07!17;UBERON:0008947!5.18e-07!17;UBERON:0003258!5.18e-07!17;UBERON:0002108!5.60e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.03e-07,12;UBERON:0002048,2.89e-07,14;UBERON:0000117,2.89e-07,14;UBERON:0000171,2.89e-07,14;UBERON:0000170,2.89e-07,14;UBERON:0005597,2.89e-07,14;UBERON:0000118,2.89e-07,14;UBERON:0005178,3.66e-07,17;UBERON:0005181,3.66e-07,17;UBERON:0002224,3.66e-07,17;UBERON:0000915,3.66e-07,17;UBERON:0008947,3.66e-07,17;UBERON:0003258,3.66e-07,17;UBERON:0005157,9.48e-07,20|phase1_expression=5.12476310735341,4.88565570695105,3.63999391511629,0,0.500895729946347,24.6782529710478,21.2587502941928,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,5.01755411891312,0.0992909512008853,0,6.23970448894286,7.34109699414944,3.44539178469012,6.46142994238612,8.83432054012145,1.52018735565099,4.03248207615889,10.6430645114546,0,0,0,6.35473563452804,6.64938581433969,10.2084678131185,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,2.34717403304412,0.872100625521786,0.219686182734472,0.194429899074283,0.699932108126813,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0,0,0,0.599200221036809,0,0.311068836925433,0.405017814995072,0.420649922702764,9.71213346972932,8.61387309711293,0.489963196859816,0.958454710182364,0.919218786610021,3.30347642998166,4.34136949489638,4.45458946443106,0.791317726381163,1.64677758484337,1.56274011167028,4.18774498502071,0.56276261003168,4.27835093775068,5.59794312399969,5.41012387036591,2.79599168737951,0.908714319998209,0.302286240427142,0.869593466105033,0.860423876981386,0,0,0,0,2.52799956237153,0,0.259786004602869,0,11.2674735821344,0,0,0,3.89683873820185,3.54703811665138,5.05524445014783,2.16949371466214,0.258937883647172,9.79718117827843,6.59244241711316,7.91610243611567,8.53277339847416,9.94769427647309,11.2885158850277,5.90632979249475,0.988779870937496,7.95296463059514,0,2.42650274921114,1.54589062922275,1.45462575940567,3.72783522436244,2.04946557908083,2.72280718857492,3.0654846625031,0,0,0,4.94309110035915,4.11750542536764,0.251308704225729,3.47648640384553,4.60287823194595,6.02585329222724,5.67844420737152,3.46253837091075,3.4833951770826,3.79084137650512,1.05220927943237,2.34216797332867,1.14951052216736,2.34080768746954,2.10986744970001,1.97305847538851,2.3060469651273,1.12442069471675,1.55222022443409,1.72454394346274,2.45837904218165,2.46331573829528,1.53437012699302,1.66828349535359,2.089512999133,1.4404749548556,1.79130840136644,0,0.257347907114715,0.568326998791185,2.89976081549703,2.81431271977315,2.88099298337624,5.20838418287463,5.90292695242211,4.31947916084659,3.95307706075693,3.75582761959467,4.67061369468678,3.45575684818309,3.447516745661,4.13450928683864,2.48539978623065,3.07370161407471,4.42881181909227,7.14985825118033,1.23485534855141,1.65209391491899,1.58670339998127,4.47905326123991,3.48355007790658,4.25262622362908,6.85723983719365,6.44896327150124,3.61428689613862,1.89811624617805,4.6115707322723,6.03204501120647,10.7436494902221,6.82374304916921,7.19055526923377,5.18731319699266,6.96994456390285,2.0863469104839,5.48392860526698,10.1436962105772,2.64746726198909,4.26695471768777,5.26018649177389,5.50157872981038,2.50937251565324,1.8839847340965,2.71473760627961,0,0.667380422864376,0.589676985339609,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,0.575392274901621,0.162135226775035,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,13.1174765018289,1.89491411770485,5.54080919902888,3.90413697282933,7.97946844180907,12.2279567932526,18.5674039891091,25.5625078693716,11.8226358079643,10.85176979279,13.2347457985714,8.84861899464985,13.1240586218081,13.5970115066621,0,0,0.491764273019036,2.48343071674259,7.22477654945064,9.37693492737625,0.163934945376675,2.52470927204373,7.2566890465739,6.24701990874622,19.1726823982191,0.716906393857656,1.55959071857676,3.11384183867716,10.5250782435473,12.2747460322751,15.8115111178609,2.57057053137446,18.3102709918667,2.31485284767432,2.280417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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:110596
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:G5E8P2,uniprot:P97433,uniprot:B2RQQ2
|association_with_transcript=0bp_to_ENSMUST00000109426,NM_012026,uc007roh.1_5end
|cluster_id=chr13:98976106..98976141,-
|description=CAGE_peak_1_at_Rgnef_5end
|id=chr13:98976106..98976141,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005157!1.63e-09!27;UBERON:0005409!2.06e-09!59;UBERON:0000160!3.28e-09!43;UBERON:0000468!1.04e-08!333;UBERON:0001264!1.51e-07!12;UBERON:0003922!1.51e-07!12;UBERON:0002114!1.51e-07!12;UBERON:0003923!1.51e-07!12;UBERON:0003924!1.51e-07!12;UBERON:0003921!1.51e-07!12;UBERON:0001045!2.32e-07!13;UBERON:0000464!3.82e-07!57;UBERON:0002048!4.12e-07!14;UBERON:0000117!4.12e-07!14;UBERON:0000171!4.12e-07!14;UBERON:0000170!4.12e-07!14;UBERON:0005597!4.12e-07!14;UBERON:0000118!4.12e-07!14;UBERON:0005178!5.18e-07!17;UBERON:0005181!5.18e-07!17;UBERON:0002224!5.18e-07!17;UBERON:0000915!5.18e-07!17;UBERON:0008947!5.18e-07!17;UBERON:0003258!5.18e-07!17;UBERON:0002108!5.60e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.03e-07,12;UBERON:0002048,2.89e-07,14;UBERON:0000117,2.89e-07,14;UBERON:0000171,2.89e-07,14;UBERON:0000170,2.89e-07,14;UBERON:0005597,2.89e-07,14;UBERON:0000118,2.89e-07,14;UBERON:0005178,3.66e-07,17;UBERON:0005181,3.66e-07,17;UBERON:0002224,3.66e-07,17;UBERON:0000915,3.66e-07,17;UBERON:0008947,3.66e-07,17;UBERON:0003258,3.66e-07,17;UBERON:0005157,9.48e-07,20
|phase1_expression=5.12476310735341,4.88565570695105,3.63999391511629,0,0.500895729946347,24.6782529710478,21.2587502941928,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,5.01755411891312,0.0992909512008853,0,6.23970448894286,7.34109699414944,3.44539178469012,6.46142994238612,8.83432054012145,1.52018735565099,4.03248207615889,10.6430645114546,0,0,0,6.35473563452804,6.64938581433969,10.2084678131185,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,2.34717403304412,0.872100625521786,0.219686182734472,0.194429899074283,0.699932108126813,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0,0,0,0.599200221036809,0,0.311068836925433,0.405017814995072,0.420649922702764,9.71213346972932,8.61387309711293,0.489963196859816,0.958454710182364,0.919218786610021,3.30347642998166,4.34136949489638,4.45458946443106,0.791317726381163,1.64677758484337,1.56274011167028,4.18774498502071,0.56276261003168,4.27835093775068,5.59794312399969,5.41012387036591,2.79599168737951,0.908714319998209,0.302286240427142,0.869593466105033,0.860423876981386,0,0,0,0,2.52799956237153,0,0.259786004602869,0,11.2674735821344,0,0,0,3.89683873820185,3.54703811665138,5.05524445014783,2.16949371466214,0.258937883647172,9.79718117827843,6.59244241711316,7.91610243611567,8.53277339847416,9.94769427647309,11.2885158850277,5.90632979249475,0.988779870937496,7.95296463059514,0,2.42650274921114,1.54589062922275,1.45462575940567,3.72783522436244,2.04946557908083,2.72280718857492,3.0654846625031,0,0,0,4.94309110035915,4.11750542536764,0.251308704225729,3.47648640384553,4.60287823194595,6.02585329222724,5.67844420737152,3.46253837091075,3.4833951770826,3.79084137650512,1.05220927943237,2.34216797332867,1.14951052216736,2.34080768746954,2.10986744970001,1.97305847538851,2.3060469651273,1.12442069471675,1.55222022443409,1.72454394346274,2.45837904218165,2.46331573829528,1.53437012699302,1.66828349535359,2.089512999133,1.4404749548556,1.79130840136644,0,0.257347907114715,0.568326998791185,2.89976081549703,2.81431271977315,2.88099298337624,5.20838418287463,5.90292695242211,4.31947916084659,3.95307706075693,3.75582761959467,4.67061369468678,3.45575684818309,3.447516745661,4.13450928683864,2.48539978623065,3.07370161407471,4.42881181909227,7.14985825118033,1.23485534855141,1.65209391491899,1.58670339998127,4.47905326123991,3.48355007790658,4.25262622362908,6.85723983719365,6.44896327150124,3.61428689613862,1.89811624617805,4.6115707322723,6.03204501120647,10.7436494902221,6.82374304916921,7.19055526923377,5.18731319699266,6.96994456390285,2.0863469104839,5.48392860526698,10.1436962105772,2.64746726198909,4.26695471768777,5.26018649177389,5.50157872981038,2.50937251565324,1.8839847340965,2.71473760627961,0,0.667380422864376,0.589676985339609,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,0.575392274901621,0.162135226775035,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,13.1174765018289,1.89491411770485,5.54080919902888,3.90413697282933,7.97946844180907,12.2279567932526,18.5674039891091,25.5625078693716,11.8226358079643,10.85176979279,13.2347457985714,8.84861899464985,13.1240586218081,13.5970115066621,0,0,0.491764273019036,2.48343071674259,7.22477654945064,9.37693492737625,0.163934945376675,2.52470927204373,7.2566890465739,6.24701990874622,19.1726823982191,0.716906393857656,1.55959071857676,3.11384183867716,10.5250782435473,12.2747460322751,15.8115111178609,2.57057053137446,18.3102709918667,2.31485284767432,2.28041743095006,3.79431282836832,6.63725691699814,8.25454162926937,6.34879469625977,8.48722858901541,14.1744908582771,11.9899707698132,11.1124166062335,12.7236805317127,13.5469003786194,12.6414703174326,12.6502330289999,21.6584640821192,12.2558258071364,6.48219938512717,4.65691261617916,3.42939256050548,10.1083933176096,11.9507107793387,9.70839221552514,7.61162372786498,5.16277757740163,0.63549621259146,1.7642271844397,2.80306630000516,2.42196640043858,2.71408162176701,1.79058516004705,1.64140899745061,2.91480836629851,10.198391610578,0.170870880797853,1.44470807574256,0.925972636848558,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0,6.68269432610579,2.68885594543965,6.91286188231286,7.56037385752609,7.73626695253534,8.95286511359328,8.09186078308924,11.6541372572724,13.0877970992015,8.16574331738295,29.2029477150855,0,3.43888055901151,1.98550188548517,3.11121901350476,2.32487682259916,3.04121025883401,3.40335992072686,3.25510962109875,2.09718688851422,0.483168241652012,1.72818003754719,0.316011120628178,1.01362607645082,1.1298205288131,1.03936658382236,1.61124026100733,1.19208812868759,0.480781798079875,0.295379054349154,1.31256384932592,0.685861259894999,0.907435666231565,0.779663045918019,0.384847366561318,0.701261413089414,3.85441652145859,0,0,0,8.113962949352,4.129014459926,3.47988086107804,1.71494703263253,1.00314420807073,2.25900737046827,3.68260189205742,1.71868654031819,2.57779773515531,2.74033007908257,2.26618169216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|short_description=p1@Rgnef
}}

Revision as of 21:02, 3 August 2015

Short description:p1@Rgnef
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rgnef_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000109426, NM_012026, uc007roh.1_5end
EntrezGene:110596
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rgnef

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.26
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.34
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I28.83
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F59.95
adrenal gland, neonate N00.CNhs11191.1311-23C111.29
adrenal gland, neonate N25.CNhs11223.1377-27I35.91
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H17.95
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.94
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C85.90
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I23.46
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G14.13
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E87.15
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D36.45
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F210.74
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G16.97
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F85.48
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G75.26
kidney, neonate N10.CNhs11206.758-6D55.50
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B113.12
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F85.54
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A612.23
lung, embryo E18.CNhs10583.1287-20I618.57
lung, neonate N00.CNhs11224.640-42C625.56
lung, neonate N06.CNhs11212.683-20E511.82
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E613.23
lung, neonate N20.CNhs11109.822-18A48.85
lung, neonate N25.CNhs11119.1359-25C713.12
lung, neonate N30.CNhs11133.1394-42H213.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A39.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I718.31
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E58.49
pancreas, embryo E17.CNhs10599.1558-45G314.17
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D712.72
pancreas, neonate N02.CNhs11139.1539-43D813.55
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F611.95
pituitary gland, embryo E17.CNhs11039.1265-44F59.71
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H32.71
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C910.20
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D47.56
stomach, embryo E17.CNhs11006.1035-18D57.74
stomach, embryo E18.CNhs10999.1286-20C68.95
stomach, neonate N03.CNhs11193.1340-24B88.09
stomach, neonate N07.CNhs11210.718-18A911.65
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C129.20
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E48.11
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B43.48





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pancreas1.03e-0712
lung2.89e-0714
respiratory tube2.89e-0714
respiration organ2.89e-0714
pair of lungs2.89e-0714
lung primordium2.89e-0714
lung bud2.89e-0714
thoracic cavity element3.66e-0717
thoracic segment organ3.66e-0717
thoracic cavity3.66e-0717
thoracic segment of trunk3.66e-0717
respiratory primordium3.66e-0717
endoderm of foregut3.66e-0717
epithelial fold9.48e-0720
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