FFCP PHASE1:Mm9::chr10:127057998..127057999,-: Difference between revisions
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{{FFCP|EntrezGene=16971|HGNC=|MCL_coexpression_id=243|UniProt=D3Z5M3|association_with_transcript=-20bp_to_ENSMUST00000118455_5end|description=CAGE_peak_9_at_Lrp1_5end|id=chr10:127057998..127057999,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,2.70e-11,2;CL:0002604,2.70e-11,2;CL:0002453,5.78e-11,8;CL:0000333,8.35e-09,10;CL:0000095,8.35e-09,10;CL:0000243,8.35e-09,10;CL:0000123,8.35e-09,10;CL:0000125,8.35e-09,10;CL:0000030,8.35e-09,10;CL:0000339,8.35e-09,10;CL:0000128,1.54e-08,6;CL:0000126,1.54e-08,6;CL:0000127,1.54e-08,6;CL:0000680,2.06e-08,6;CL:0000187,2.06e-08,6;CL:0000056,2.06e-08,6;CL:0000192,3.94e-08,3;CL:0000359,3.94e-08,3;CL:0002539,3.94e-08,3;CL:0000514,3.94e-08,3;CL:0002293,4.62e-08,3;CL:0002321,1.17e-07,70;CL:0000222,2.81e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.94e-08,3;UBERON:0004237,3.94e-08,3;UBERON:0004695,3.94e-08,3;UBERON:0002111,3.94e-08,3;UBERON:0004178,3.94e-08,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,0.912392380975631,2.20256102594018,4.69434806608824,0.65407546914134,1.31811709640683,1.36100929351998,0.419959264876088,0,0,0,0,0.514518872071894,0.85960031981627,1.03134418455488,0.202316460859598,0,0,2.03306719241479,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,0.898800331555214,2.30530983192933,0,0,0,2.85650984403804,0.662605622854841,0,0.287536413054709,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.61119299110724,0,0.284743361598206,0.186399445825301,0,0.226714680320357,0,0,0.679971333707751,0.539703191637817,0.649776417447669,1.34408066129201,0.421333260395256,1.02258193546835,0.259786004602869,0,0,1.28326477414318,12.7402619853323,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0.647067399789637,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.486723789203273,0.305518091550949,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.272145996605311,0.12811372028485,0,0,0,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.442830443938806,0,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.405720242777006,0.482354319504834,0,0,0.162135226775035,0,0,1.11642284300551,0.312037673114561,0.505157755894224,0.179397413521912,0.482443521363367,0,0.189491411770485,0,0.169745085775188,0,0,0,0.390267295715598,0.315270288212382,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0,0.321101179975584,0.586058432961016,0.819674726883377,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0.283880170416537,0.890328018336276,0.81443479676788,0.164970122972535,0,0,0,0,0,0,0,0.727067458955011,1.06949213515416,0,0,0,0,0,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0,0.98931751764888,0.484393280087717,0.0603129249281559,0.358117032009409,0,0,0,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0.496375471371293,0.777804753376191,0.258319646955462,0.506868376472335,0.821500670520278,0.39061315453185,0.314578033277133,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,0.36630324853453,0.643105137237198,0,0,0,0,0.515559547031063,0,0,0,0.900642406448441,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0.551530525350042,0,0.206035057238894,0,0,0,0.377252682772152,0.280924522409647,0.192075457214608,0.34461281373368,0,0.347652977834566,1.35036454324594,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.436039249896986,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0.661774257358546,0|short_description=p9@Lrp1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16971 | |||
|HGNC= | |||
|MCL_coexpression_id=243 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z5M3 | |||
|association_with_transcript=-20bp_to_ENSMUST00000118455_5end | |||
|cluster_id=chr10:127057998..127057999,- | |||
|description=CAGE_peak_9_at_Lrp1_5end | |||
|id=chr10:127057998..127057999,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.70e-11,2;CL:0002604,2.70e-11,2;CL:0002453,5.78e-11,8;CL:0000333,8.35e-09,10;CL:0000095,8.35e-09,10;CL:0000243,8.35e-09,10;CL:0000123,8.35e-09,10;CL:0000125,8.35e-09,10;CL:0000030,8.35e-09,10;CL:0000339,8.35e-09,10;CL:0000128,1.54e-08,6;CL:0000126,1.54e-08,6;CL:0000127,1.54e-08,6;CL:0000680,2.06e-08,6;CL:0000187,2.06e-08,6;CL:0000056,2.06e-08,6;CL:0000192,3.94e-08,3;CL:0000359,3.94e-08,3;CL:0002539,3.94e-08,3;CL:0000514,3.94e-08,3;CL:0002293,4.62e-08,3;CL:0002321,1.17e-07,70;CL:0000222,2.81e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.94e-08,3;UBERON:0004237,3.94e-08,3;UBERON:0004695,3.94e-08,3;UBERON:0002111,3.94e-08,3;UBERON:0004178,3.94e-08,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,0.912392380975631,2.20256102594018,4.69434806608824,0.65407546914134,1.31811709640683,1.36100929351998,0.419959264876088,0,0,0,0,0.514518872071894,0.85960031981627,1.03134418455488,0.202316460859598,0,0,2.03306719241479,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,0.898800331555214,2.30530983192933,0,0,0,2.85650984403804,0.662605622854841,0,0.287536413054709,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.61119299110724,0,0.284743361598206,0.186399445825301,0,0.226714680320357,0,0,0.679971333707751,0.539703191637817,0.649776417447669,1.34408066129201,0.421333260395256,1.02258193546835,0.259786004602869,0,0,1.28326477414318,12.7402619853323,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0.647067399789637,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.486723789203273,0.305518091550949,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.272145996605311,0.12811372028485,0,0,0,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.442830443938806,0,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.405720242777006,0.482354319504834,0,0,0.162135226775035,0,0,1.11642284300551,0.312037673114561,0.505157755894224,0.179397413521912,0.482443521363367,0,0.189491411770485,0,0.169745085775188,0,0,0,0.390267295715598,0.315270288212382,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0,0.321101179975584,0.586058432961016,0.819674726883377,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0.283880170416537,0.890328018336276,0.81443479676788,0.164970122972535,0,0,0,0,0,0,0,0.727067458955011,1.06949213515416,0,0,0,0,0,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0,0.98931751764888,0.484393280087717,0.0603129249281559,0.358117032009409,0,0,0,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0.496375471371293,0.777804753376191,0.258319646955462,0.506868376472335,0.821500670520278,0.39061315453185,0.314578033277133,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,0.36630324853453,0.643105137237198,0,0,0,0,0.515559547031063,0,0,0,0.900642406448441,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0.551530525350042,0,0.206035057238894,0,0,0,0.377252682772152,0.280924522409647,0.192075457214608,0.34461281373368,0,0.347652977834566,1.35036454324594,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.436039249896986,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0.661774257358546,0 | |||
|short_description=p9@Lrp1 | |||
}} |
Revision as of 01:39, 4 August 2015
Short description: | p9@Lrp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Lrp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:243 |
Association with transcript: | -20bp_to_ENSMUST00000118455_5end |
EntrezGene: | 16971 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.70e-11 | 2 |
astrocyte of the hippocampus | 2.70e-11 | 2 |
oligodendrocyte precursor cell | 5.78e-11 | 8 |
migratory neural crest cell | 8.35e-09 | 10 |
neuron associated cell | 8.35e-09 | 10 |
glial cell (sensu Vertebrata) | 8.35e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 8.35e-09 | 10 |
glial cell | 8.35e-09 | 10 |
glioblast | 8.35e-09 | 10 |
glioblast (sensu Vertebrata) | 8.35e-09 | 10 |
oligodendrocyte | 1.54e-08 | 6 |
macroglial cell | 1.54e-08 | 6 |
astrocyte | 1.54e-08 | 6 |
muscle precursor cell | 2.06e-08 | 6 |
muscle cell | 2.06e-08 | 6 |
myoblast | 2.06e-08 | 6 |
smooth muscle cell | 3.94e-08 | 3 |
vascular associated smooth muscle cell | 3.94e-08 | 3 |
aortic smooth muscle cell | 3.94e-08 | 3 |
smooth muscle myoblast | 3.94e-08 | 3 |
epithelial cell of thymus | 4.62e-08 | 3 |
embryonic cell | 1.17e-07 | 70 |
mesodermal cell | 2.81e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.94e-08 | 3 |
blood vessel smooth muscle | 3.94e-08 | 3 |
arterial system smooth muscle | 3.94e-08 | 3 |
artery smooth muscle tissue | 3.94e-08 | 3 |
aorta smooth muscle tissue | 3.94e-08 | 3 |