FFCP PHASE1:Mm9::chr2:132771496..132771508,-: Difference between revisions
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{{FFCP|EntrezGene=241639|HGNC=|MCL_coexpression_id=72|UniProt=|association_with_transcript=-131bp_to_ENSMUST00000134937_5end|description=CAGE_peak_7_at_Fermt1_5end|id=chr2:132771496..132771508,-|ontology_enrichment_celltype=CL:0002563!8.24e-09!9;CL:0002251!8.24e-09!9;CL:0002076!1.83e-08!15;CL:0000066!5.47e-08!25|ontology_enrichment_celltype_v019_2=CL:0002076,4.03e-17,15;CL:0002563,3.52e-16,9;CL:0002251,3.52e-16,9;CL:0000066,7.26e-15,25;CL:0000223,4.42e-12,20;CL:0000239,1.92e-11,6;CL:0000677,1.92e-11,6;CL:0000584,1.92e-11,6;CL:0000075,1.10e-09,7;CL:0000068,1.46e-07,3;CL:0002202,1.46e-07,3;CL:0000069,1.46e-07,3;CL:0002632,1.46e-07,3;CL:0002368,1.46e-07,3;CL:0000307,1.46e-07,3;CL:0000377,1.46e-07,3;CL:0000682,9.06e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.44e-22!43;UBERON:0005409!2.43e-22!59;UBERON:0004119!4.29e-15!130;UBERON:0000925!4.29e-15!130;UBERON:0006595!4.29e-15!130;UBERON:0001007!2.64e-14!128;UBERON:0001555!2.64e-14!128;UBERON:0007026!2.64e-14!128;UBERON:0000344!1.11e-13!15;UBERON:0004921!4.86e-13!126;UBERON:0004185!4.86e-13!126;UBERON:0001242!6.78e-12!13;UBERON:0000060!6.78e-12!13;UBERON:0001262!6.78e-12!13;UBERON:0004786!6.78e-12!13;UBERON:0003350!8.24e-09!9;UBERON:0004808!8.24e-09!9;UBERON:0001277!8.24e-09!9;UBERON:0004923!3.48e-08!24;UBERON:0000485!1.14e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.46e-45,31;UBERON:0005409,1.26e-43,47;UBERON:0000344,5.06e-26,15;UBERON:0001242,2.09e-22,13;UBERON:0001262,2.09e-22,13;UBERON:0004786,2.09e-22,13;UBERON:0001007,5.80e-21,116;UBERON:0001555,5.80e-21,116;UBERON:0007026,5.80e-21,116;UBERON:0004119,1.95e-20,118;UBERON:0000925,1.95e-20,118;UBERON:0006595,1.95e-20,118;UBERON:0004921,1.08e-18,114;UBERON:0003350,3.52e-16,9;UBERON:0004808,3.52e-16,9;UBERON:0001277,3.52e-16,9;UBERON:0004923,8.90e-15,24;UBERON:0000485,6.97e-13,11;UBERON:0003126,1.46e-07,3;UBERON:0001005,1.46e-07,3;UBERON:0007196,1.46e-07,3;UBERON:0001558,1.46e-07,3;UBERON:0002108,2.98e-07,4;UBERON:0011216,5.79e-07,194|phase1_expression=0,6.2815573375085,1.81999695755814,1.81478526784098,2.00358291978539,7.05092942029937,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75972722056264,3.44113921600755,5.7423196411502,3.01533397311352,3.878482188346,1.90023419456374,1.51218077855958,3.54768817048488,0,0,0,3.75507105676657,2.49351968037739,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,19.0512116089868,23.3091076237091,25.2762222507392,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0,0,0.631325567659422,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0.431135985865684,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,2.11560453330835,0.426576501070468,0.464473343720877,1.9330119198314,1.4117846723634,2.44615848229357,2.09248188723815,3.79623249235609,1.64698954724011,4.52403375840485,2.38747766449381,5.65395852645448,2.69645822596266,1.08069024937347,4.58024928485045,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.738050739898011,1.255989822731,0.616985819609003,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,1.31976098378028,0,0.242780636154981,0.604647113929502,0,0,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0.328281799490123,1.7488850197791,0,0,0,0,0,0,0,0,0,0,5.72802370809068,0,0,0.86404272657441,1.25452977608681,1.31017538247707,1.07891477107857,1.32245529160537,2.87931536182433,4.01806417204558,1.86401793926078,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.596044064343795,0,0.147689527174577,0.201932899896295,0.15241361331,0.201652370273681,0.487289403698762,0.192423683280659,0.116876902181569,0,0.221985953374065,0,0,0,1.31377732815827,1.83151624267265,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.962757628775446,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.114870937911227,0,0.579421629724277,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.470546902076653,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p7@Fermt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241639 | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-131bp_to_ENSMUST00000134937_5end | |||
|cluster_id=chr2:132771496..132771508,- | |||
|description=CAGE_peak_7_at_Fermt1_5end | |||
|id=chr2:132771496..132771508,- | |||
|ontology_enrichment_celltype=CL:0002563!8.24e-09!9;CL:0002251!8.24e-09!9;CL:0002076!1.83e-08!15;CL:0000066!5.47e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.03e-17,15;CL:0002563,3.52e-16,9;CL:0002251,3.52e-16,9;CL:0000066,7.26e-15,25;CL:0000223,4.42e-12,20;CL:0000239,1.92e-11,6;CL:0000677,1.92e-11,6;CL:0000584,1.92e-11,6;CL:0000075,1.10e-09,7;CL:0000068,1.46e-07,3;CL:0002202,1.46e-07,3;CL:0000069,1.46e-07,3;CL:0002632,1.46e-07,3;CL:0002368,1.46e-07,3;CL:0000307,1.46e-07,3;CL:0000377,1.46e-07,3;CL:0000682,9.06e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.44e-22!43;UBERON:0005409!2.43e-22!59;UBERON:0004119!4.29e-15!130;UBERON:0000925!4.29e-15!130;UBERON:0006595!4.29e-15!130;UBERON:0001007!2.64e-14!128;UBERON:0001555!2.64e-14!128;UBERON:0007026!2.64e-14!128;UBERON:0000344!1.11e-13!15;UBERON:0004921!4.86e-13!126;UBERON:0004185!4.86e-13!126;UBERON:0001242!6.78e-12!13;UBERON:0000060!6.78e-12!13;UBERON:0001262!6.78e-12!13;UBERON:0004786!6.78e-12!13;UBERON:0003350!8.24e-09!9;UBERON:0004808!8.24e-09!9;UBERON:0001277!8.24e-09!9;UBERON:0004923!3.48e-08!24;UBERON:0000485!1.14e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.46e-45,31;UBERON:0005409,1.26e-43,47;UBERON:0000344,5.06e-26,15;UBERON:0001242,2.09e-22,13;UBERON:0001262,2.09e-22,13;UBERON:0004786,2.09e-22,13;UBERON:0001007,5.80e-21,116;UBERON:0001555,5.80e-21,116;UBERON:0007026,5.80e-21,116;UBERON:0004119,1.95e-20,118;UBERON:0000925,1.95e-20,118;UBERON:0006595,1.95e-20,118;UBERON:0004921,1.08e-18,114;UBERON:0003350,3.52e-16,9;UBERON:0004808,3.52e-16,9;UBERON:0001277,3.52e-16,9;UBERON:0004923,8.90e-15,24;UBERON:0000485,6.97e-13,11;UBERON:0003126,1.46e-07,3;UBERON:0001005,1.46e-07,3;UBERON:0007196,1.46e-07,3;UBERON:0001558,1.46e-07,3;UBERON:0002108,2.98e-07,4;UBERON:0011216,5.79e-07,194 | |||
|phase1_expression=0,6.2815573375085,1.81999695755814,1.81478526784098,2.00358291978539,7.05092942029937,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75972722056264,3.44113921600755,5.7423196411502,3.01533397311352,3.878482188346,1.90023419456374,1.51218077855958,3.54768817048488,0,0,0,3.75507105676657,2.49351968037739,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,19.0512116089868,23.3091076237091,25.2762222507392,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0,0,0.631325567659422,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0.431135985865684,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,2.11560453330835,0.426576501070468,0.464473343720877,1.9330119198314,1.4117846723634,2.44615848229357,2.09248188723815,3.79623249235609,1.64698954724011,4.52403375840485,2.38747766449381,5.65395852645448,2.69645822596266,1.08069024937347,4.58024928485045,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.738050739898011,1.255989822731,0.616985819609003,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,1.31976098378028,0,0.242780636154981,0.604647113929502,0,0,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0.328281799490123,1.7488850197791,0,0,0,0,0,0,0,0,0,0,5.72802370809068,0,0,0.86404272657441,1.25452977608681,1.31017538247707,1.07891477107857,1.32245529160537,2.87931536182433,4.01806417204558,1.86401793926078,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.596044064343795,0,0.147689527174577,0.201932899896295,0.15241361331,0.201652370273681,0.487289403698762,0.192423683280659,0.116876902181569,0,0.221985953374065,0,0,0,1.31377732815827,1.83151624267265,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.962757628775446,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.114870937911227,0,0.579421629724277,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.470546902076653,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p7@Fermt1 | |||
}} |
Revision as of 02:57, 4 August 2015
Short description: | p7@Fermt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Fermt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | -131bp_to_ENSMUST00000134937_5end |
EntrezGene: | 241639 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.03e-17 | 15 |
intestinal epithelial cell | 3.52e-16 | 9 |
epithelial cell of alimentary canal | 3.52e-16 | 9 |
epithelial cell | 7.26e-15 | 25 |
endodermal cell | 4.42e-12 | 20 |
brush border epithelial cell | 1.92e-11 | 6 |
gut absorptive cell | 1.92e-11 | 6 |
enterocyte | 1.92e-11 | 6 |
columnar/cuboidal epithelial cell | 1.10e-09 | 7 |
duct epithelial cell | 1.46e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.46e-07 | 3 |
branched duct epithelial cell | 1.46e-07 | 3 |
epithelial cell of lower respiratory tract | 1.46e-07 | 3 |
respiratory epithelial cell | 1.46e-07 | 3 |
tracheal epithelial cell | 1.46e-07 | 3 |
tracheoblast | 1.46e-07 | 3 |
M cell of gut | 9.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.46e-45 | 31 |
gastrointestinal system | 1.26e-43 | 47 |
mucosa | 5.06e-26 | 15 |
intestinal mucosa | 2.09e-22 | 13 |
wall of intestine | 2.09e-22 | 13 |
gastrointestinal system mucosa | 2.09e-22 | 13 |
digestive system | 5.80e-21 | 116 |
digestive tract | 5.80e-21 | 116 |
primitive gut | 5.80e-21 | 116 |
endoderm-derived structure | 1.95e-20 | 118 |
endoderm | 1.95e-20 | 118 |
presumptive endoderm | 1.95e-20 | 118 |
subdivision of digestive tract | 1.08e-18 | 114 |
epithelium of mucosa | 3.52e-16 | 9 |
gastrointestinal system epithelium | 3.52e-16 | 9 |
intestinal epithelium | 3.52e-16 | 9 |
organ component layer | 8.90e-15 | 24 |
simple columnar epithelium | 6.97e-13 | 11 |
trachea | 1.46e-07 | 3 |
respiratory airway | 1.46e-07 | 3 |
tracheobronchial tree | 1.46e-07 | 3 |
lower respiratory tract | 1.46e-07 | 3 |
small intestine | 2.98e-07 | 4 |
organ system subdivision | 5.79e-07 | 194 |