FFCP PHASE1:Mm9::chr8:86097400..86097411,-: Difference between revisions
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{{FFCP|EntrezGene=106529|HGNC=|MCL_coexpression_id=68|UniProt=|association_with_transcript=-178bp_to_uc012ggs.1_5end|description=CAGE_peak_7_at_Tecr_5end|id=chr8:86097400..86097411,-|ontology_enrichment_celltype=CL:0000838!2.76e-08!12;CL:0000542!1.60e-07!13;CL:0000051!1.60e-07!13;CL:0000084!2.68e-07!11;CL:0000827!2.68e-07!11|ontology_enrichment_celltype_v019_2=CL:0000893,1.12e-07,6;CL:0002489,1.12e-07,6;CL:0000898,1.12e-07,6;CL:0000809,1.12e-07,6;CL:0000810,1.12e-07,6;CL:0000895,1.12e-07,6;CL:0000808,1.12e-07,6;CL:0000894,1.12e-07,6;CL:0000806,1.12e-07,6;CL:0000807,1.12e-07,6;CL:0000805,1.12e-07,6;CL:0002425,1.12e-07,6;CL:0002436,1.12e-07,6;CL:0002427,1.12e-07,6;CL:0002428,1.12e-07,6;CL:0002429,1.12e-07,6;CL:0002433,1.12e-07,6;CL:0002431,1.12e-07,6;CL:0002432,1.12e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.92e-16!23;UBERON:0000974!4.92e-16!23;UBERON:0004807!4.92e-16!23;UBERON:0005058!4.92e-16!23;UBERON:0003351!4.92e-16!23;UBERON:0009113!4.92e-16!23;UBERON:0003295!4.92e-16!23;UBERON:0009722!4.92e-16!23;UBERON:0005562!4.92e-16!23;UBERON:0007690!4.92e-16!23;UBERON:0006562!3.52e-15!24;UBERON:0003408!3.52e-15!24;UBERON:0001557!3.52e-15!24;UBERON:0001042!3.52e-15!24;UBERON:0008814!3.52e-15!24;UBERON:0009145!3.52e-15!24;UBERON:0000072!5.31e-13!27;UBERON:0004177!8.36e-12!29;UBERON:0000063!2.62e-10!35;UBERON:0002193!2.20e-09!48;UBERON:0000065!3.38e-09!41;UBERON:0002390!3.45e-09!45;UBERON:0003061!3.45e-09!45;UBERON:0001004!7.21e-09!42;UBERON:0003081!5.12e-08!88|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.52e-11,23;UBERON:0000974,9.52e-11,23;UBERON:0004807,9.52e-11,23;UBERON:0005058,9.52e-11,23;UBERON:0003351,9.52e-11,23;UBERON:0009113,9.52e-11,23;UBERON:0003295,9.52e-11,23;UBERON:0009722,9.52e-11,23;UBERON:0005562,9.52e-11,23;UBERON:0007690,9.52e-11,23;UBERON:0006562,2.63e-10,24;UBERON:0003408,2.63e-10,24;UBERON:0001557,2.63e-10,24;UBERON:0001042,2.63e-10,24;UBERON:0008814,2.63e-10,24;UBERON:0009145,2.63e-10,24;UBERON:0000072,3.56e-09,27;UBERON:0004177,1.50e-08,29;UBERON:0005057,1.50e-08,29;UBERON:0000077,4.26e-07,35;UBERON:0007811,6.69e-07,36|phase1_expression=0,0,0,0,0,0,0,0,2.39340827657833,0,7.87602653837323,0.478632953972018,0.342401459862411,0,0,0.202475267389826,0,0,0,0.42438965179803,0,0.595745707205312,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,0.523523743973798,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.324275238183423,0.584799949701329,1.09775057645525,1.34206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0.358053391334963,0.198681354781265,0.240390899039938,0.443068581523732,0.504832249740738,0.533447646584999,0.705783295957884,1.07203668813728,1.15454209968395,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p7@Tecr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:106529 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-178bp_to_uc012ggs.1_5end | |||
|cluster_id=chr8:86097400..86097411,- | |||
|description=CAGE_peak_7_at_Tecr_5end | |||
|id=chr8:86097400..86097411,- | |||
|ontology_enrichment_celltype=CL:0000838!2.76e-08!12;CL:0000542!1.60e-07!13;CL:0000051!1.60e-07!13;CL:0000084!2.68e-07!11;CL:0000827!2.68e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.12e-07,6;CL:0002489,1.12e-07,6;CL:0000898,1.12e-07,6;CL:0000809,1.12e-07,6;CL:0000810,1.12e-07,6;CL:0000895,1.12e-07,6;CL:0000808,1.12e-07,6;CL:0000894,1.12e-07,6;CL:0000806,1.12e-07,6;CL:0000807,1.12e-07,6;CL:0000805,1.12e-07,6;CL:0002425,1.12e-07,6;CL:0002436,1.12e-07,6;CL:0002427,1.12e-07,6;CL:0002428,1.12e-07,6;CL:0002429,1.12e-07,6;CL:0002433,1.12e-07,6;CL:0002431,1.12e-07,6;CL:0002432,1.12e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.92e-16!23;UBERON:0000974!4.92e-16!23;UBERON:0004807!4.92e-16!23;UBERON:0005058!4.92e-16!23;UBERON:0003351!4.92e-16!23;UBERON:0009113!4.92e-16!23;UBERON:0003295!4.92e-16!23;UBERON:0009722!4.92e-16!23;UBERON:0005562!4.92e-16!23;UBERON:0007690!4.92e-16!23;UBERON:0006562!3.52e-15!24;UBERON:0003408!3.52e-15!24;UBERON:0001557!3.52e-15!24;UBERON:0001042!3.52e-15!24;UBERON:0008814!3.52e-15!24;UBERON:0009145!3.52e-15!24;UBERON:0000072!5.31e-13!27;UBERON:0004177!8.36e-12!29;UBERON:0000063!2.62e-10!35;UBERON:0002193!2.20e-09!48;UBERON:0000065!3.38e-09!41;UBERON:0002390!3.45e-09!45;UBERON:0003061!3.45e-09!45;UBERON:0001004!7.21e-09!42;UBERON:0003081!5.12e-08!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.52e-11,23;UBERON:0000974,9.52e-11,23;UBERON:0004807,9.52e-11,23;UBERON:0005058,9.52e-11,23;UBERON:0003351,9.52e-11,23;UBERON:0009113,9.52e-11,23;UBERON:0003295,9.52e-11,23;UBERON:0009722,9.52e-11,23;UBERON:0005562,9.52e-11,23;UBERON:0007690,9.52e-11,23;UBERON:0006562,2.63e-10,24;UBERON:0003408,2.63e-10,24;UBERON:0001557,2.63e-10,24;UBERON:0001042,2.63e-10,24;UBERON:0008814,2.63e-10,24;UBERON:0009145,2.63e-10,24;UBERON:0000072,3.56e-09,27;UBERON:0004177,1.50e-08,29;UBERON:0005057,1.50e-08,29;UBERON:0000077,4.26e-07,35;UBERON:0007811,6.69e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,2.39340827657833,0,7.87602653837323,0.478632953972018,0.342401459862411,0,0,0.202475267389826,0,0,0,0.42438965179803,0,0.595745707205312,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,0.523523743973798,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.324275238183423,0.584799949701329,1.09775057645525,1.34206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0.358053391334963,0.198681354781265,0.240390899039938,0.443068581523732,0.504832249740738,0.533447646584999,0.705783295957884,1.07203668813728,1.15454209968395,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Tecr | |||
}} |
Revision as of 04:46, 4 August 2015
Short description: | p7@Tecr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tecr_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | -178bp_to_uc012ggs.1_5end |
EntrezGene: | 106529 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 1.12e-07 | 6 |
double negative thymocyte | 1.12e-07 | 6 |
naive T cell | 1.12e-07 | 6 |
double-positive, alpha-beta thymocyte | 1.12e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 1.12e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.12e-07 | 6 |
DN4 thymocyte | 1.12e-07 | 6 |
DN1 thymic pro-T cell | 1.12e-07 | 6 |
DN2 thymocyte | 1.12e-07 | 6 |
DN3 thymocyte | 1.12e-07 | 6 |
immature single positive thymocyte | 1.12e-07 | 6 |
early T lineage precursor | 1.12e-07 | 6 |
mature CD4 single-positive thymocyte | 1.12e-07 | 6 |
resting double-positive thymocyte | 1.12e-07 | 6 |
double-positive blast | 1.12e-07 | 6 |
CD69-positive double-positive thymocyte | 1.12e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.12e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.12e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.12e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 9.52e-11 | 23 |
neck | 9.52e-11 | 23 |
respiratory system epithelium | 9.52e-11 | 23 |
hemolymphoid system gland | 9.52e-11 | 23 |
pharyngeal epithelium | 9.52e-11 | 23 |
thymic region | 9.52e-11 | 23 |
pharyngeal gland | 9.52e-11 | 23 |
entire pharyngeal arch endoderm | 9.52e-11 | 23 |
thymus primordium | 9.52e-11 | 23 |
early pharyngeal endoderm | 9.52e-11 | 23 |
pharynx | 2.63e-10 | 24 |
gland of gut | 2.63e-10 | 24 |
upper respiratory tract | 2.63e-10 | 24 |
chordate pharynx | 2.63e-10 | 24 |
pharyngeal arch system | 2.63e-10 | 24 |
pharyngeal region of foregut | 2.63e-10 | 24 |
segment of respiratory tract | 3.56e-09 | 27 |
hemopoietic organ | 1.50e-08 | 29 |
immune organ | 1.50e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 4.26e-07 | 35 |
craniocervical region | 6.69e-07 | 36 |