FFCP PHASE1:Mm9::chr2:155207922..155208010,+: Difference between revisions
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{{FFCP|EntrezGene=68728|HGNC=|MCL_coexpression_id=79|UniProt=A2ARD0|association_with_transcript=0bp_to_ENSMUST00000134218_5end|description=CAGE_peak_2_at_Trp53inp2_5end|id=chr2:155207922..155208010,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!8.29e-09!18;UBERON:0000948!8.29e-09!18;UBERON:0005498!8.29e-09!18;UBERON:0004140!8.29e-09!18;UBERON:0009881!8.29e-09!18;UBERON:0004141!8.29e-09!18;UBERON:0003084!8.29e-09!18;UBERON:0007005!8.29e-09!18;UBERON:0004139!8.29e-09!18;UBERON:0004291!8.29e-09!18;UBERON:0004111!2.99e-07!122;UBERON:0004535!4.77e-07!23;UBERON:0001009!4.77e-07!23;UBERON:0000025!7.26e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.78e-10,92;UBERON:0007100,7.92e-09,18;UBERON:0000948,7.92e-09,18;UBERON:0005498,7.92e-09,18;UBERON:0004140,7.92e-09,18;UBERON:0009881,7.92e-09,18;UBERON:0004141,7.92e-09,18;UBERON:0003084,7.92e-09,18;UBERON:0007005,7.92e-09,18;UBERON:0004139,7.92e-09,18;UBERON:0004291,7.92e-09,18;UBERON:0004111,2.92e-07,122;UBERON:0004535,4.60e-07,23;UBERON:0001009,4.60e-07,23;UBERON:0000025,7.10e-07,114|phase1_expression=2.08193501236232,6.2815573375085,8.18998630901165,10.8887116070459,8.01433167914156,5.03637815735669,3.97141489012394,0.387369970324729,0.281577444303333,0.936258105287974,0.34243593645101,0.159544317990673,0.171200729931206,0.961624426608971,0.333109761815663,0.202475267389826,0.699561878128147,2.36596624018678,0.548457734422955,1.69755860719212,25.598030335472,0.297872853602656,0.261199789138935,6.87967418011649,3.89995777814189,6.31655160526522,4.73838195774982,5.17130958446134,5.89072600314759,4.03248207615889,3.10422714917427,1.27006134691926,2.46025915033828,0,2.59966457776147,1.99481574430191,2.6542016314108,7.95210098400125,3.1253413780952,7.32933241563318,15.2940186888064,5.46436387966757,14.0798002379035,2.51793635951155,1.31790010585369,2.9367480345869,5.47673941043627,26.5990690784145,19.3323840806335,19.8318497055769,14.6985742706631,20.125359011096,5.20126078778983,0,0.672187598284928,8.7468208252222,7.16333599846892,9.7977697532714,4.65327859977075,4.23192783417626,3.80298842103708,3.72728985276045,6.22506357277798,0.899899717281399,1.97773272513395,2.1314403448383,20.6724076257699,19.2109152660777,1.8664130215526,2.29510095163874,2.10324961351382,12.8542942981712,9.49734726091938,1.95985278743926,2.77951865952885,2.75765635983006,14.3150645299205,19.4084753889485,15.3606533256243,5.40733779693795,4.66586982372289,3.64639359389732,21.4970909231063,16.8828783009504,12.835052813252,10.0173719061047,9.39653093274079,6.89677949553612,2.27178579999552,3.55186332501892,5.50742528533188,6.88339101585109,2.719885334831,16.1910957491345,18.1937396885347,32.2579358710082,16.431997155415,5.11290967734173,2.33807404142582,3.18005617059306,2.81686839553361,3.84979432242953,7.64415719119937,28.4426681261332,0.865964164044856,0.506719730950197,2.02209778005913,18.0410529956115,3.10725460376606,11.5784868470563,3.29622120855658,7.61163695780353,9.91646638201052,9.64624899536784,9.64227398512779,21.4889871173745,2.47194967734374,52.7787652757678,10.6153266233985,14.5590164952668,12.8088080707028,11.6370060752453,16.775258509631,18.4451902117275,20.3163305609051,9.19645398750929,0.11981512450592,1.19980546198682,0.508280908292259,19.472783122627,15.0975198930147,5.02617408451458,17.3824320192276,17.9000820131231,22.0255327233134,17.1975738851823,0.916554274652847,5.349499736234,2.77995034277042,10.9429765060966,0.780722657776222,0.919608417733892,1.80062129805349,2.56198190320716,1.76894897793452,3.33095672740609,3.65436725782942,10.0894314588216,0.862271971731369,1.13463648100692,1.58356011747554,1.53437012699302,3.05851974148158,2.43776516565517,1.64625709126355,0.995171334092466,0,0.51469581422943,0.568326998791185,14.4988040774851,18.5275587385066,14.2249028554202,22.9642393517654,20.0699516382352,21.7516629171203,22.0907247512887,23.6080593231665,26.155436690246,38.013325330014,39.728526307141,57.4777859680117,44.444796177301,49.6183260557774,43.6170860971208,13.24826675954,3.70456604565424,12.2254949704005,10.3135720998782,1.2797295032114,1.85789337488351,1.15980715189884,2.8235693447268,4.00280478920767,4.37518940058886,5.69434873853414,4.11747386810027,3.2673577144035,4.97391180102877,4.67913809085888,8.98819408654222,7.3486936957396,11.948476395262,1.89667900953082,2.39921876480431,2.25415471346161,5.09128319613286,6.20647958936402,7.50453272826409,10.8766843853723,26.8650469322876,22.2938193534752,19.6201490635663,18.0836102523161,0.667380422864376,0.982794975566015,0,0.202860121388503,0.482354319504834,1.2731292589071,3.45235364940973,10.7009249671523,4.66754402419738,23.0029130443767,10.0478055870496,11.8574315783533,16.9227848224565,10.7638448113147,15.4381926836277,3.69506380333209,2.65287976478679,1.46668478797823,1.18821560042632,0.704070744865506,1.67506257441816,1.6663054862021,2.53673742215138,3.78324345854858,1.5502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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68728 | |||
|HGNC= | |||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ARD0 | |||
|association_with_transcript=0bp_to_ENSMUST00000134218_5end | |||
|cluster_id=chr2:155207922..155208010,+ | |||
|description=CAGE_peak_2_at_Trp53inp2_5end | |||
|id=chr2:155207922..155208010,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.29e-09!18;UBERON:0000948!8.29e-09!18;UBERON:0005498!8.29e-09!18;UBERON:0004140!8.29e-09!18;UBERON:0009881!8.29e-09!18;UBERON:0004141!8.29e-09!18;UBERON:0003084!8.29e-09!18;UBERON:0007005!8.29e-09!18;UBERON:0004139!8.29e-09!18;UBERON:0004291!8.29e-09!18;UBERON:0004111!2.99e-07!122;UBERON:0004535!4.77e-07!23;UBERON:0001009!4.77e-07!23;UBERON:0000025!7.26e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.78e-10,92;UBERON:0007100,7.92e-09,18;UBERON:0000948,7.92e-09,18;UBERON:0005498,7.92e-09,18;UBERON:0004140,7.92e-09,18;UBERON:0009881,7.92e-09,18;UBERON:0004141,7.92e-09,18;UBERON:0003084,7.92e-09,18;UBERON:0007005,7.92e-09,18;UBERON:0004139,7.92e-09,18;UBERON:0004291,7.92e-09,18;UBERON:0004111,2.92e-07,122;UBERON:0004535,4.60e-07,23;UBERON:0001009,4.60e-07,23;UBERON:0000025,7.10e-07,114 | |||
|phase1_expression=2.08193501236232,6.2815573375085,8.18998630901165,10.8887116070459,8.01433167914156,5.03637815735669,3.97141489012394,0.387369970324729,0.281577444303333,0.936258105287974,0.34243593645101,0.159544317990673,0.171200729931206,0.961624426608971,0.333109761815663,0.202475267389826,0.699561878128147,2.36596624018678,0.548457734422955,1.69755860719212,25.598030335472,0.297872853602656,0.261199789138935,6.87967418011649,3.89995777814189,6.31655160526522,4.73838195774982,5.17130958446134,5.89072600314759,4.03248207615889,3.10422714917427,1.27006134691926,2.46025915033828,0,2.59966457776147,1.99481574430191,2.6542016314108,7.95210098400125,3.1253413780952,7.32933241563318,15.2940186888064,5.46436387966757,14.0798002379035,2.51793635951155,1.31790010585369,2.9367480345869,5.47673941043627,26.5990690784145,19.3323840806335,19.8318497055769,14.6985742706631,20.125359011096,5.20126078778983,0,0.672187598284928,8.7468208252222,7.16333599846892,9.7977697532714,4.65327859977075,4.23192783417626,3.80298842103708,3.72728985276045,6.22506357277798,0.899899717281399,1.97773272513395,2.1314403448383,20.6724076257699,19.2109152660777,1.8664130215526,2.29510095163874,2.10324961351382,12.8542942981712,9.49734726091938,1.95985278743926,2.77951865952885,2.75765635983006,14.3150645299205,19.4084753889485,15.3606533256243,5.40733779693795,4.66586982372289,3.64639359389732,21.4970909231063,16.8828783009504,12.835052813252,10.0173719061047,9.39653093274079,6.89677949553612,2.27178579999552,3.55186332501892,5.50742528533188,6.88339101585109,2.719885334831,16.1910957491345,18.1937396885347,32.2579358710082,16.431997155415,5.11290967734173,2.33807404142582,3.18005617059306,2.81686839553361,3.84979432242953,7.64415719119937,28.4426681261332,0.865964164044856,0.506719730950197,2.02209778005913,18.0410529956115,3.10725460376606,11.5784868470563,3.29622120855658,7.61163695780353,9.91646638201052,9.64624899536784,9.64227398512779,21.4889871173745,2.47194967734374,52.7787652757678,10.6153266233985,14.5590164952668,12.8088080707028,11.6370060752453,16.775258509631,18.4451902117275,20.3163305609051,9.19645398750929,0.11981512450592,1.19980546198682,0.508280908292259,19.472783122627,15.0975198930147,5.02617408451458,17.3824320192276,17.9000820131231,22.0255327233134,17.1975738851823,0.916554274652847,5.349499736234,2.77995034277042,10.9429765060966,0.780722657776222,0.919608417733892,1.80062129805349,2.56198190320716,1.76894897793452,3.33095672740609,3.65436725782942,10.0894314588216,0.862271971731369,1.13463648100692,1.58356011747554,1.53437012699302,3.05851974148158,2.43776516565517,1.64625709126355,0.995171334092466,0,0.51469581422943,0.568326998791185,14.4988040774851,18.5275587385066,14.2249028554202,22.9642393517654,20.0699516382352,21.7516629171203,22.0907247512887,23.6080593231665,26.155436690246,38.013325330014,39.728526307141,57.4777859680117,44.444796177301,49.6183260557774,43.6170860971208,13.24826675954,3.70456604565424,12.2254949704005,10.3135720998782,1.2797295032114,1.85789337488351,1.15980715189884,2.8235693447268,4.00280478920767,4.37518940058886,5.69434873853414,4.11747386810027,3.2673577144035,4.97391180102877,4.67913809085888,8.98819408654222,7.3486936957396,11.948476395262,1.89667900953082,2.39921876480431,2.25415471346161,5.09128319613286,6.20647958936402,7.50453272826409,10.8766843853723,26.8650469322876,22.2938193534752,19.6201490635663,18.0836102523161,0.667380422864376,0.982794975566015,0,0.202860121388503,0.482354319504834,1.2731292589071,3.45235364940973,10.7009249671523,4.66754402419738,23.0029130443767,10.0478055870496,11.8574315783533,16.9227848224565,10.7638448113147,15.4381926836277,3.69506380333209,2.65287976478679,1.46668478797823,1.18821560042632,0.704070744865506,1.67506257441816,1.6663054862021,2.53673742215138,3.78324345854858,1.55025282754142,3.50800491046472,5.73521601505083,7.42545422023351,4.91806799177139,1.50791283939272,2.71952841909355,2.45882136509518,1.65562047782839,26.8119485279613,26.2554177966535,2.95082901678016,41.9101739159259,3.15508219416257,2.73307121007647,5.60100834105277,1.91175038362042,3.11918143715352,2.54768877709949,5.26253912177363,7.89090816360542,4.34816555741176,25.0630626809009,9.65192579416227,2.84904965867608,1.30309567482861,3.46437258242324,37.1686387351896,2.6705869977048,1.51161778482376,1.50884063804718,5.02013217897314,2.76691633149535,3.6179961043551,5.08947221268508,4.27796854061666,39.8206314999128,42.1674434299995,39.191506434311,14.6389030474129,0.36012218806262,2.8458910432206,3.42939256050548,12.5911565886014,9.27517851530767,9.54384319492302,8.82948352432338,4.22409074514679,5.93129798418696,6.3953235435939,10.5527201882547,4.68246837418126,7.78036731573211,7.16234064018819,9.84845398470368,7.57850175237612,25.9595422814714,1.19609616558497,0.82554747185289,0.370389054739423,0.376736914009382,0.956859594047176,0.228778173206523,0.509935289981566,0.979660166265606,0.829199842826543,21.9574242143476,1.42351197111511,1.42323626988794,1.40406943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| |||
|short_description=p2@Trp53inp2 | |||
}} |
Revision as of 08:24, 4 August 2015
Short description: | p2@Trp53inp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trp53inp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000134218_5end |
EntrezGene: | 68728 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.78e-10 | 92 |
primary circulatory organ | 7.92e-09 | 18 |
heart | 7.92e-09 | 18 |
primitive heart tube | 7.92e-09 | 18 |
primary heart field | 7.92e-09 | 18 |
anterior lateral plate mesoderm | 7.92e-09 | 18 |
heart tube | 7.92e-09 | 18 |
heart primordium | 7.92e-09 | 18 |
cardiac mesoderm | 7.92e-09 | 18 |
cardiogenic plate | 7.92e-09 | 18 |
heart rudiment | 7.92e-09 | 18 |
anatomical conduit | 2.92e-07 | 122 |
cardiovascular system | 4.60e-07 | 23 |
circulatory system | 4.60e-07 | 23 |
tube | 7.10e-07 | 114 |