FFCP PHASE1:Mm9::chr9:100544024..100544045,+: Difference between revisions
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{{FFCP|EntrezGene=20842|HGNC=|MCL_coexpression_id=1670|UniProt=F8WHU7,D6RHQ7,Q9D3E6,D3Z1T1,Q8C918|association_with_transcript=0bp_to_ENSMUST00000041418,ENSMUST00000123315,ENSMUST00000138405,ENSMUST00000144005,NM_009282,uc009rey.1,uc009rez.1,uc009rfa.1,uc009rfb.1,uc012gzf.1_5end|description=CAGE_peak_1_at_Stag1_5end|id=chr9:100544024..100544045,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!6.35e-11!147;UBERON:0004177!2.37e-10!29;UBERON:0003408!2.50e-08!24;UBERON:0002370!3.19e-08!23;UBERON:0000974!3.19e-08!23;UBERON:0004807!3.19e-08!23;UBERON:0005058!3.19e-08!23;UBERON:0003351!3.19e-08!23;UBERON:0009113!3.19e-08!23;UBERON:0003295!3.19e-08!23;UBERON:0009722!3.19e-08!23;UBERON:0005562!3.19e-08!23;UBERON:0007690!3.19e-08!23;UBERON:0001004!3.33e-08!42;UBERON:0000065!4.64e-08!41;UBERON:0006562!7.43e-08!24;UBERON:0001557!7.43e-08!24;UBERON:0001042!7.43e-08!24;UBERON:0008814!7.43e-08!24;UBERON:0009145!7.43e-08!24;UBERON:0001041!1.29e-07!92;UBERON:0000926!1.29e-07!193;UBERON:0004120!1.29e-07!193;UBERON:0006603!1.29e-07!193;UBERON:0005911!1.30e-07!69;UBERON:0005057!1.66e-07!51;UBERON:0003081!7.68e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.45e-10,134;UBERON:0004177,2.37e-10,29;UBERON:0005057,2.37e-10,29;UBERON:0000153,1.73e-09,43;UBERON:0000077,1.47e-08,35;UBERON:0007811,2.23e-08,36;UBERON:0003408,2.50e-08,24;UBERON:0002370,3.19e-08,23;UBERON:0000974,3.19e-08,23;UBERON:0004807,3.19e-08,23;UBERON:0005058,3.19e-08,23;UBERON:0003351,3.19e-08,23;UBERON:0009113,3.19e-08,23;UBERON:0003295,3.19e-08,23;UBERON:0009722,3.19e-08,23;UBERON:0005562,3.19e-08,23;UBERON:0007690,3.19e-08,23;UBERON:0001004,3.33e-08,42;UBERON:0000065,4.64e-08,41;UBERON:0001041,4.88e-08,80;UBERON:0006562,7.43e-08,24;UBERON:0001557,7.43e-08,24;UBERON:0001042,7.43e-08,24;UBERON:0008814,7.43e-08,24;UBERON:0009145,7.43e-08,24;UBERON:0005911,1.30e-07,69|phase1_expression=13.7728008510123,15.3549179361319,11.8299802241279,17.2404600444893,13.5241847085514,21.6564260766338,17.9881733258555,31.5060909197446,37.4498000923434,32.5349691587571,26.7100030431788,24.0114198575963,45.0257919719071,36.4543078087219,14.3237197580735,40.2925782105754,37.7763414189199,39.4327706697797,38.8033847104241,38.1950686618227,16.4983982893075,12.3120779489098,10.4479915655574,13.2793710918528,11.4704640533585,12.0588712464154,10.3382879078178,15.0829862880122,13.6816862008589,20.4144405105544,13.082100128663,6.35030673459631,7.38077745101484,0,21.6638714813456,18.6182802801511,24.5003227514843,26.7860243671621,22.6587249911902,34.5525671022707,29.9998058895817,27.3218193983378,21.3624555333708,12.9673722514845,12.8748702648783,11.0128051297009,4.69434806608824,1.09012578190223,0.659058548203415,1.94429899074283,2.09979632438044,1.43752564364972,40.100042847799,38.4441935266013,34.6176613116738,11.5766746216176,15.7593391966316,14.4388185837684,6.47412674750713,6.87688273053643,3.1691570175309,2.71075625655306,0.889294796111139,3.1496490104849,1.97773272513395,3.5524005747305,2.69640099466564,3.07374644257244,14.101787273953,6.34527910158946,7.57169860864975,5.14171771926846,6.18431914664518,13.229006315215,9.10531974673246,5.51531271966013,4.40463523997555,9.44886301830389,11.981309593987,4.74790635828698,6.95306091378313,8.85552729946492,6.14202597803038,7.87867654044352,11.4598685832608,13.5529149317887,13.0981946335175,8.57437450796383,17.3412982732991,12.1670211771925,47.5377761470752,21.5105969245347,2.719885334831,10.2543606411185,11.0461990966104,10.3046184032387,18.5386634573912,13.8048561288227,7.79358013808606,7.0667914902068,10.140726223921,25.6652954828636,12.7402619853323,7.11066703153331,7.14420435337007,7.60079596425296,3.53867111510348,15.186456002635,52.823328264023,14.5473296283528,13.7053408145247,9.74289530598852,8.76338889573022,12.5099791658677,15.1689432205059,11.5613264023301,19.0340125155468,23.7142945348655,33.6152009740952,22.6473589926373,25.6176161414057,30.547140947519,14.9113408974498,30.7419836862124,32.8831329697124,17.8819938646014,34.7463861067169,14.3976655438418,22.3643599648594,12.8819949888148,15.5550204958333,10.4293112253677,9.38651329038293,6.90431734791892,10.8049783170971,10.2211995732687,22.0991419555186,30.3553008288627,11.8779696463827,15.1518136238261,23.5518001762494,19.7715809812787,21.6074555766419,28.3325057531144,30.2082056231896,30.3629517075094,30.3593587573521,19.4027528054262,18.1077114063587,27.4203816243338,27.2724242454121,14.9053098050751,28.9169139194622,28.9049298213398,20.3724315043864,20.6995637491233,9.83098462238529,12.0953516343916,21.3122624546694,16.7771875753757,14.7751417788091,19.0865785148676,17.7558551688908,14.1670246858131,16.9693824176116,20.2304531932855,22.2666923161684,13.8950757416932,18.2661433403963,18.5509234409378,21.3210969105601,19.7369983024199,14.0512073786272,13.9574675510787,10.5144974282064,10.1875566255492,10.9038198384653,11.1069237998689,19.1959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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20842 | |||
|HGNC= | |||
|MCL_coexpression_id=1670 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WHU7,uniprot:D6RHQ7,uniprot:Q9D3E6,uniprot:D3Z1T1,uniprot:Q8C918 | |||
|association_with_transcript=0bp_to_ENSMUST00000041418,ENSMUST00000123315,ENSMUST00000138405,ENSMUST00000144005,NM_009282,uc009rey.1,uc009rez.1,uc009rfa.1,uc009rfb.1,uc012gzf.1_5end | |||
|cluster_id=chr9:100544024..100544045,+ | |||
|description=CAGE_peak_1_at_Stag1_5end | |||
|id=chr9:100544024..100544045,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!6.35e-11!147;UBERON:0004177!2.37e-10!29;UBERON:0003408!2.50e-08!24;UBERON:0002370!3.19e-08!23;UBERON:0000974!3.19e-08!23;UBERON:0004807!3.19e-08!23;UBERON:0005058!3.19e-08!23;UBERON:0003351!3.19e-08!23;UBERON:0009113!3.19e-08!23;UBERON:0003295!3.19e-08!23;UBERON:0009722!3.19e-08!23;UBERON:0005562!3.19e-08!23;UBERON:0007690!3.19e-08!23;UBERON:0001004!3.33e-08!42;UBERON:0000065!4.64e-08!41;UBERON:0006562!7.43e-08!24;UBERON:0001557!7.43e-08!24;UBERON:0001042!7.43e-08!24;UBERON:0008814!7.43e-08!24;UBERON:0009145!7.43e-08!24;UBERON:0001041!1.29e-07!92;UBERON:0000926!1.29e-07!193;UBERON:0004120!1.29e-07!193;UBERON:0006603!1.29e-07!193;UBERON:0005911!1.30e-07!69;UBERON:0005057!1.66e-07!51;UBERON:0003081!7.68e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.45e-10,134;UBERON:0004177,2.37e-10,29;UBERON:0005057,2.37e-10,29;UBERON:0000153,1.73e-09,43;UBERON:0000077,1.47e-08,35;UBERON:0007811,2.23e-08,36;UBERON:0003408,2.50e-08,24;UBERON:0002370,3.19e-08,23;UBERON:0000974,3.19e-08,23;UBERON:0004807,3.19e-08,23;UBERON:0005058,3.19e-08,23;UBERON:0003351,3.19e-08,23;UBERON:0009113,3.19e-08,23;UBERON:0003295,3.19e-08,23;UBERON:0009722,3.19e-08,23;UBERON:0005562,3.19e-08,23;UBERON:0007690,3.19e-08,23;UBERON:0001004,3.33e-08,42;UBERON:0000065,4.64e-08,41;UBERON:0001041,4.88e-08,80;UBERON:0006562,7.43e-08,24;UBERON:0001557,7.43e-08,24;UBERON:0001042,7.43e-08,24;UBERON:0008814,7.43e-08,24;UBERON:0009145,7.43e-08,24;UBERON:0005911,1.30e-07,69 | |||
|phase1_expression=13.7728008510123,15.3549179361319,11.8299802241279,17.2404600444893,13.5241847085514,21.6564260766338,17.9881733258555,31.5060909197446,37.4498000923434,32.5349691587571,26.7100030431788,24.0114198575963,45.0257919719071,36.4543078087219,14.3237197580735,40.2925782105754,37.7763414189199,39.4327706697797,38.8033847104241,38.1950686618227,16.4983982893075,12.3120779489098,10.4479915655574,13.2793710918528,11.4704640533585,12.0588712464154,10.3382879078178,15.0829862880122,13.6816862008589,20.4144405105544,13.082100128663,6.35030673459631,7.38077745101484,0,21.6638714813456,18.6182802801511,24.5003227514843,26.7860243671621,22.6587249911902,34.5525671022707,29.9998058895817,27.3218193983378,21.3624555333708,12.9673722514845,12.8748702648783,11.0128051297009,4.69434806608824,1.09012578190223,0.659058548203415,1.94429899074283,2.09979632438044,1.43752564364972,40.100042847799,38.4441935266013,34.6176613116738,11.5766746216176,15.7593391966316,14.4388185837684,6.47412674750713,6.87688273053643,3.1691570175309,2.71075625655306,0.889294796111139,3.1496490104849,1.97773272513395,3.5524005747305,2.69640099466564,3.07374644257244,14.101787273953,6.34527910158946,7.57169860864975,5.14171771926846,6.18431914664518,13.229006315215,9.10531974673246,5.51531271966013,4.40463523997555,9.44886301830389,11.981309593987,4.74790635828698,6.95306091378313,8.85552729946492,6.14202597803038,7.87867654044352,11.4598685832608,13.5529149317887,13.0981946335175,8.57437450796383,17.3412982732991,12.1670211771925,47.5377761470752,21.5105969245347,2.719885334831,10.2543606411185,11.0461990966104,10.3046184032387,18.5386634573912,13.8048561288227,7.79358013808606,7.0667914902068,10.140726223921,25.6652954828636,12.7402619853323,7.11066703153331,7.14420435337007,7.60079596425296,3.53867111510348,15.186456002635,52.823328264023,14.5473296283528,13.7053408145247,9.74289530598852,8.76338889573022,12.5099791658677,15.1689432205059,11.5613264023301,19.0340125155468,23.7142945348655,33.6152009740952,22.6473589926373,25.6176161414057,30.547140947519,14.9113408974498,30.7419836862124,32.8831329697124,17.8819938646014,34.7463861067169,14.3976655438418,22.3643599648594,12.8819949888148,15.5550204958333,10.4293112253677,9.38651329038293,6.90431734791892,10.8049783170971,10.2211995732687,22.0991419555186,30.3553008288627,11.8779696463827,15.1518136238261,23.5518001762494,19.7715809812787,21.6074555766419,28.3325057531144,30.2082056231896,30.3629517075094,30.3593587573521,19.4027528054262,18.1077114063587,27.4203816243338,27.2724242454121,14.9053098050751,28.9169139194622,28.9049298213398,20.3724315043864,20.6995637491233,9.83098462238529,12.0953516343916,21.3122624546694,16.7771875753757,14.7751417788091,19.0865785148676,17.7558551688908,14.1670246858131,16.9693824176116,20.2304531932855,22.2666923161684,13.8950757416932,18.2661433403963,18.5509234409378,21.3210969105601,19.7369983024199,14.0512073786272,13.9574675510787,10.5144974282064,10.1875566255492,10.9038198384653,11.1069237998689,19.1959425481711,21.3657738111603,25.7734922644187,25.0087570532945,16.2335972006755,15.5985013412299,21.353807769503,14.493508015713,13.8234364840148,17.110256595539,15.7920910566487,13.4822911298133,17.7233200897249,21.5072575114717,5.50036912763937,23.4209450849944,29.3040112750009,23.0126000465205,19.2012962295949,19.4977579295086,21.4371860851232,17.7132177575523,19.7818397080132,12.9567022117891,12.1545577105731,21.1893284259439,23.3905204184712,27.658039823337,19.2717115319078,26.047133253261,18.8423130318251,23.8787794084173,19.2940919862292,17.5719304440372,44.5681440234799,11.5363693777236,19.6583734062173,14.1444171650383,17.0427542845817,10.6137574699941,21.6161232494927,20.8440552947533,22.6521317254416,21.7273709792241,22.2955735874077,25.1259386162724,20.7097967570832,23.4160377429359,23.3300013277163,24.3611158613652,23.1209414553356,23.2685906896348,24.6939524068231,24.87963807602,27.142431109069,2.17562273527484,12.7858710984949,15.1765210467603,9.15138362930414,8.79087649441524,8.52461715958712,14.3908428506493,11.042787679569,7.41833614163613,8.61693590931196,12.6653462914853,12.0311284004493,13.3045969470751,13.7635638569464,10.5212108848072,11.0680577825027,20.2432429345738,20.1554920995741,11.5742642383716,23.6186091062685,22.7658769702099,15.9294166007955,15.5379607139188,13.9068836203785,17.1630622577867,6.79194353625777,14.1420168054207,17.573123935439,29.0826983582004,19.9638531895444,22.7546465713787,18.9753495434998,21.6584640821192,16.6815406819356,19.0864759673189,4.13947788104814,12.0028739617692,16.3153014950892,14.2695054081656,14.3157647923845,6.39376393140658,14.7843176080138,11.4389318266463,13.0111754852428,32.1528193235886,24.7040572844735,24.8489250704002,23.3969794246147,21.0100351673678,18.6547735443104,11.8672193286726,23.5801815501037,21.8770080041016,24.2604830854322,35.4132699168819,34.0368627025353,31.5713879025001,36.5453624486789,34.7079601762672,30.5421942107777,1.90934123603023,23.408863525004,27.65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| |||
|short_description=p1@Stag1 | |||
}} |
Revision as of 10:21, 4 August 2015
Short description: | p1@Stag1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stag1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1670 |
Association with transcript: | 0bp_to_ENSMUST00000041418, ENSMUST00000123315, ENSMUST00000138405, ENSMUST00000144005, NM_009282, uc009rey.1, uc009rez.1, uc009rfa.1, uc009rfb.1, uc012gzf.1_5end |
EntrezGene: | 20842 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 1.45e-10 | 134 |
hemopoietic organ | 2.37e-10 | 29 |
immune organ | 2.37e-10 | 29 |
anterior region of body | 1.73e-09 | 43 |
mixed endoderm/mesoderm-derived structure | 1.47e-08 | 35 |
craniocervical region | 2.23e-08 | 36 |
gland of gut | 2.50e-08 | 24 |
thymus | 3.19e-08 | 23 |
neck | 3.19e-08 | 23 |
respiratory system epithelium | 3.19e-08 | 23 |
hemolymphoid system gland | 3.19e-08 | 23 |
pharyngeal epithelium | 3.19e-08 | 23 |
thymic region | 3.19e-08 | 23 |
pharyngeal gland | 3.19e-08 | 23 |
entire pharyngeal arch endoderm | 3.19e-08 | 23 |
thymus primordium | 3.19e-08 | 23 |
early pharyngeal endoderm | 3.19e-08 | 23 |
respiratory system | 3.33e-08 | 42 |
respiratory tract | 4.64e-08 | 41 |
foregut | 4.88e-08 | 80 |
pharynx | 7.43e-08 | 24 |
upper respiratory tract | 7.43e-08 | 24 |
chordate pharynx | 7.43e-08 | 24 |
pharyngeal arch system | 7.43e-08 | 24 |
pharyngeal region of foregut | 7.43e-08 | 24 |
endo-epithelium | 1.30e-07 | 69 |