FFCP PHASE1:Mm9::chr7:144388046..144388053,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=618|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:144388046..144388053,-|id=chr7:144388046..144388053,-|ontology_enrichment_celltype=CL:0000540!5.70e-07!33;CL:0000047!5.70e-07!33;CL:0000031!5.70e-07!33;CL:0000404!5.70e-07!33|ontology_enrichment_celltype_v019_2=CL:0000120,2.06e-27,3;CL:0002612,3.10e-27,3;CL:0000117,4.16e-24,23;CL:0000337,4.16e-24,23;CL:0000540,1.01e-16,33;CL:0000047,1.01e-16,33;CL:0000031,1.01e-16,33;CL:0000404,1.01e-16,33;CL:0000393,4.27e-14,39;CL:0000211,4.27e-14,39;CL:0002319,9.45e-13,43;CL:0000221,1.88e-12,44;CL:0000133,1.88e-12,44;CL:0002613,2.77e-12,3;CL:0002321,9.30e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002257,3.10e-27,3;UBERON:0001948,1.21e-16,5;UBERON:0002315,1.21e-16,5;UBERON:0002240,5.52e-14,6;UBERON:0005174,5.52e-14,6;UBERON:0001137,5.52e-14,6;UBERON:0000369,9.66e-08,5;UBERON:0002435,9.66e-08,5;UBERON:0000204,9.66e-08,5;UBERON:0010082,9.66e-08,5;UBERON:0001017,2.53e-07,73;UBERON:0003076,2.74e-07,12;UBERON:0003057,2.74e-07,12;UBERON:0001016,4.10e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,2.22548106945558,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0,0,1.45074916503213,2.10421580285542,0.52091337055676,0.558365998002762,0,0.15279824777681,2.35702868378934,2.42031857358475,3.91438836233131,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.647067399789637,0.441683036920787,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.272145996605311,0.640568601424249,0.0937017245597288,0,0.646703978798527,0.378212160335639,0.879755620819744,0.876782929710299,1.94633074457919,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492502392237286,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0.477937595905104,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0,0.493647061806363,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0.512200817262403,0,0.628839487883947,0,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0,0.188626341386076,0.37456602987953,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0.824171801606613,0.441596760403192,0.685738504770831,0.887379030796687,0.238436189947321,0.581385666529314,0.282328141245992,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,0,0.355905054372522,0.492522411877817,0,0.309873682371932,0,0.749431733813838,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr7:144388046..144388053,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=618 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:144388046..144388053,- | |||
|description=CAGE_peak_at_chr7:144388046..144388053,- | |||
|id=chr7:144388046..144388053,- | |||
|ontology_enrichment_celltype=CL:0000540!5.70e-07!33;CL:0000047!5.70e-07!33;CL:0000031!5.70e-07!33;CL:0000404!5.70e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,2.06e-27,3;CL:0002612,3.10e-27,3;CL:0000117,4.16e-24,23;CL:0000337,4.16e-24,23;CL:0000540,1.01e-16,33;CL:0000047,1.01e-16,33;CL:0000031,1.01e-16,33;CL:0000404,1.01e-16,33;CL:0000393,4.27e-14,39;CL:0000211,4.27e-14,39;CL:0002319,9.45e-13,43;CL:0000221,1.88e-12,44;CL:0000133,1.88e-12,44;CL:0002613,2.77e-12,3;CL:0002321,9.30e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,3.10e-27,3;UBERON:0001948,1.21e-16,5;UBERON:0002315,1.21e-16,5;UBERON:0002240,5.52e-14,6;UBERON:0005174,5.52e-14,6;UBERON:0001137,5.52e-14,6;UBERON:0000369,9.66e-08,5;UBERON:0002435,9.66e-08,5;UBERON:0000204,9.66e-08,5;UBERON:0010082,9.66e-08,5;UBERON:0001017,2.53e-07,73;UBERON:0003076,2.74e-07,12;UBERON:0003057,2.74e-07,12;UBERON:0001016,4.10e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,2.22548106945558,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0,0,1.45074916503213,2.10421580285542,0.52091337055676,0.558365998002762,0,0.15279824777681,2.35702868378934,2.42031857358475,3.91438836233131,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.647067399789637,0.441683036920787,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.272145996605311,0.640568601424249,0.0937017245597288,0,0.646703978798527,0.378212160335639,0.879755620819744,0.876782929710299,1.94633074457919,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492502392237286,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0.477937595905104,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0,0.493647061806363,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0.512200817262403,0,0.628839487883947,0,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0,0.188626341386076,0.37456602987953,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0.824171801606613,0.441596760403192,0.685738504770831,0.887379030796687,0.238436189947321,0.581385666529314,0.282328141245992,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,0,0.355905054372522,0.492522411877817,0,0.309873682371932,0,0.749431733813838,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr7:144388046..144388053,- | |||
}} |
Latest revision as of 10:41, 4 August 2015
Short description: | p@chr7:144388046..144388053, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:144388046..144388053, - |
Coexpression cluster: | MCL_coexpression_mm9:618 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 2.06e-27 | 3 |
neuron of the ventral spinal cord | 3.10e-27 | 3 |
CNS neuron (sensu Vertebrata) | 4.16e-24 | 23 |
neuroblast (sensu Vertebrata) | 4.16e-24 | 23 |
neuron | 1.01e-16 | 33 |
neuronal stem cell | 1.01e-16 | 33 |
neuroblast | 1.01e-16 | 33 |
electrically signaling cell | 1.01e-16 | 33 |
electrically responsive cell | 4.27e-14 | 39 |
electrically active cell | 4.27e-14 | 39 |
neural cell | 9.45e-13 | 43 |
ectodermal cell | 1.88e-12 | 44 |
neurectodermal cell | 1.88e-12 | 44 |
striatum neuron | 2.77e-12 | 3 |
embryonic cell | 9.30e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 3.10e-27 | 3 |
regional part of spinal cord | 1.21e-16 | 5 |
gray matter of spinal cord | 1.21e-16 | 5 |
spinal cord | 5.52e-14 | 6 |
dorsal region element | 5.52e-14 | 6 |
dorsum | 5.52e-14 | 6 |
corpus striatum | 9.66e-08 | 5 |
striatum | 9.66e-08 | 5 |
ventral part of telencephalon | 9.66e-08 | 5 |
future corpus striatum | 9.66e-08 | 5 |
central nervous system | 2.53e-07 | 73 |
posterior neural tube | 2.74e-07 | 12 |
chordal neural plate | 2.74e-07 | 12 |
nervous system | 4.10e-07 | 75 |