FFCP PHASE1:Mm9::chr5:58309965..58309977,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=581|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:58309965..58309977,+|id=chr5:58309965..58309977,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.37e-09!23;UBERON:0001009!1.37e-09!23;UBERON:0007100!5.46e-09!18;UBERON:0000948!5.46e-09!18;UBERON:0005498!5.46e-09!18;UBERON:0004140!5.46e-09!18;UBERON:0009881!5.46e-09!18;UBERON:0004141!5.46e-09!18;UBERON:0003084!5.46e-09!18;UBERON:0007005!5.46e-09!18;UBERON:0004139!5.46e-09!18;UBERON:0004291!5.46e-09!18;UBERON:0004872!9.85e-09!33;UBERON:0002021!6.72e-08!10;UBERON:0000411!6.72e-08!10;UBERON:0001950!6.72e-08!10;UBERON:0000468!2.38e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.64e-19,23;UBERON:0001009,3.64e-19,23;UBERON:0007100,1.99e-18,18;UBERON:0000948,1.99e-18,18;UBERON:0005498,1.99e-18,18;UBERON:0004140,1.99e-18,18;UBERON:0009881,1.99e-18,18;UBERON:0004141,1.99e-18,18;UBERON:0003084,1.99e-18,18;UBERON:0007005,1.99e-18,18;UBERON:0004139,1.99e-18,18;UBERON:0004291,1.99e-18,18;UBERON:0002021,4.52e-15,10;UBERON:0000411,4.52e-15,10;UBERON:0001950,4.52e-15,10;UBERON:0004872,3.00e-13,33;UBERON:0010314,5.90e-12,92;UBERON:0003103,6.77e-08,43;UBERON:0000025,7.22e-08,114;UBERON:0002619,8.21e-08,17;UBERON:0004111,2.34e-07,122;UBERON:0000956,6.15e-07,21;UBERON:0001869,6.15e-07,21;UBERON:0000203,6.15e-07,21;UBERON:0003914,9.05e-07,47|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,1.21652317463417,2.20256102594018,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0,0,0.244981598429908,0.0958454710182364,0,0,0.510749352340751,1.53606533256243,0.263772575460388,0.457438218012048,0,0,0.56276261003168,1.83357897332172,0.883885756421003,0.854230084794618,0.559198337475902,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0.346970653532272,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0.741584903203122,1.15679485535929,0,0.808834249737046,0.441683036920787,1.45462575940567,0,0.292780797011547,0.209446706813455,0,0,0,0,1.3481157546434,0,0.376963056338593,1.04294592115366,2.30143911597297,0.83115217823824,1.1356888414743,0.81471491080253,0.497627882440372,0,0.210441855886474,0.650602214813519,0,0.180062129805349,1.20563854268572,1.29269348387523,1.7935920839879,1.03071897015702,1.81092359517311,0,1.32374256117473,0.175951124163949,0,1.11218899690239,0.348252166522167,0.411564272815887,1.59227413454795,0,0,0,1.24275463521301,2.34526059981096,3.6012412292203,2.60419209143731,2.55793501271625,6.17068451549513,12.7893669612724,2.68273401399619,5.02090972178829,5.59503489705834,6.40253109908471,1.54030738137126,3.07019973593198,3.73235195994786,2.41571553768669,0,0.617427674275707,0,0,1.70630600428187,1.85789337488351,0.257734922644187,1.00841762311671,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0,0,0.432276099749388,0.199141273254367,0,1.14248512609729,0,1.62921062276251,0.193952487167626,0.280543279561274,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,1.18821560042632,0.469380496577004,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.655453258862952,0.172684981865896,0,0,0.54390568381871,0,0,0.80275294993896,0.586058432961016,0.327869890753351,0,0.94652465824877,0.390438744296638,0.646270193198397,0.716906393857656,1.33679204449436,0.849229592366497,0,0,0,0.963963949265421,1.27746076687442,0.534196811001766,0.488660878060728,1.64970122972535,0,0,0.604647113929502,0,0,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.354680467284547,0.891844088010353,0.329098041204242,0,0.469343416127421,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0,0,0,1.8542530201051,0,0.619160603889667,1.85194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.474503990371703,0.609958401380546,2.91614420218863,1.67270636811575,1.9652630737156,1.48350781023303,0.495920734352016,1.57053565190418,0.648074866458964,0,0,0,0.165458490457098,0.194451188344048,0,0.337912250981556,0.821500670520278,0.651021924219751,0.209718688851422,0.483168241652012,0,0,0.608175645870493,0.410843828659309,0.25984164595559,0,0.39736270956253,0.240390899039938,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.965947970160952,0.563047426353546,2.01466786693992,1.2862102744744,0.501572104035363,2.82375921308533,2.76195141904306,3.43737308063638,2.23409137046794,2.05524755931193,3.0215755895588,1.35004500046361,2.2516060161211,3.17199686288943,2.07104124700728,0,1.59609949360412,0,0.243106717068294,0,0,0.2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=581 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:58309965..58309977,+ | |||
|description=CAGE_peak_at_chr5:58309965..58309977,+ | |||
|id=chr5:58309965..58309977,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.37e-09!23;UBERON:0001009!1.37e-09!23;UBERON:0007100!5.46e-09!18;UBERON:0000948!5.46e-09!18;UBERON:0005498!5.46e-09!18;UBERON:0004140!5.46e-09!18;UBERON:0009881!5.46e-09!18;UBERON:0004141!5.46e-09!18;UBERON:0003084!5.46e-09!18;UBERON:0007005!5.46e-09!18;UBERON:0004139!5.46e-09!18;UBERON:0004291!5.46e-09!18;UBERON:0004872!9.85e-09!33;UBERON:0002021!6.72e-08!10;UBERON:0000411!6.72e-08!10;UBERON:0001950!6.72e-08!10;UBERON:0000468!2.38e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.64e-19,23;UBERON:0001009,3.64e-19,23;UBERON:0007100,1.99e-18,18;UBERON:0000948,1.99e-18,18;UBERON:0005498,1.99e-18,18;UBERON:0004140,1.99e-18,18;UBERON:0009881,1.99e-18,18;UBERON:0004141,1.99e-18,18;UBERON:0003084,1.99e-18,18;UBERON:0007005,1.99e-18,18;UBERON:0004139,1.99e-18,18;UBERON:0004291,1.99e-18,18;UBERON:0002021,4.52e-15,10;UBERON:0000411,4.52e-15,10;UBERON:0001950,4.52e-15,10;UBERON:0004872,3.00e-13,33;UBERON:0010314,5.90e-12,92;UBERON:0003103,6.77e-08,43;UBERON:0000025,7.22e-08,114;UBERON:0002619,8.21e-08,17;UBERON:0004111,2.34e-07,122;UBERON:0000956,6.15e-07,21;UBERON:0001869,6.15e-07,21;UBERON:0000203,6.15e-07,21;UBERON:0003914,9.05e-07,47 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,1.21652317463417,2.20256102594018,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0,0,0.244981598429908,0.0958454710182364,0,0,0.510749352340751,1.53606533256243,0.263772575460388,0.457438218012048,0,0,0.56276261003168,1.83357897332172,0.883885756421003,0.854230084794618,0.559198337475902,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0.346970653532272,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0.741584903203122,1.15679485535929,0,0.808834249737046,0.441683036920787,1.45462575940567,0,0.292780797011547,0.209446706813455,0,0,0,0,1.3481157546434,0,0.376963056338593,1.04294592115366,2.30143911597297,0.83115217823824,1.1356888414743,0.81471491080253,0.497627882440372,0,0.210441855886474,0.650602214813519,0,0.180062129805349,1.20563854268572,1.29269348387523,1.7935920839879,1.03071897015702,1.81092359517311,0,1.32374256117473,0.175951124163949,0,1.11218899690239,0.348252166522167,0.411564272815887,1.59227413454795,0,0,0,1.24275463521301,2.34526059981096,3.6012412292203,2.60419209143731,2.55793501271625,6.17068451549513,12.7893669612724,2.68273401399619,5.02090972178829,5.59503489705834,6.40253109908471,1.54030738137126,3.07019973593198,3.73235195994786,2.41571553768669,0,0.617427674275707,0,0,1.70630600428187,1.85789337488351,0.257734922644187,1.00841762311671,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0,0,0.432276099749388,0.199141273254367,0,1.14248512609729,0,1.62921062276251,0.193952487167626,0.280543279561274,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,1.18821560042632,0.469380496577004,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.655453258862952,0.172684981865896,0,0,0.54390568381871,0,0,0.80275294993896,0.586058432961016,0.327869890753351,0,0.94652465824877,0.390438744296638,0.646270193198397,0.716906393857656,1.33679204449436,0.849229592366497,0,0,0,0.963963949265421,1.27746076687442,0.534196811001766,0.488660878060728,1.64970122972535,0,0,0.604647113929502,0,0,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.354680467284547,0.891844088010353,0.329098041204242,0,0.469343416127421,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0,0,0,1.8542530201051,0,0.619160603889667,1.85194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.474503990371703,0.609958401380546,2.91614420218863,1.67270636811575,1.9652630737156,1.48350781023303,0.495920734352016,1.57053565190418,0.648074866458964,0,0,0,0.165458490457098,0.194451188344048,0,0.337912250981556,0.821500670520278,0.651021924219751,0.209718688851422,0.483168241652012,0,0,0.608175645870493,0.410843828659309,0.25984164595559,0,0.39736270956253,0.240390899039938,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.965947970160952,0.563047426353546,2.01466786693992,1.2862102744744,0.501572104035363,2.82375921308533,2.76195141904306,3.43737308063638,2.23409137046794,2.05524755931193,3.0215755895588,1.35004500046361,2.2516060161211,3.17199686288943,2.07104124700728,0,1.59609949360412,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.962757628775446,0.505394423527595,0.760437899670719,0.754505365544305,0.468207537349412,0.384150914429216,0.574354689556133,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,0.588795680537589,0.685738504770831,1.24233064311536,0.238436189947321,0.436039249896986,0.752875043322645,0.592302255241736,0.182927972872773,1.57841826862706,0.679020569229309,0,0.474540072496697,0.689531376628944,0.818462086339379,0.464810523557898,0.578719832943424,0,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr5:58309965..58309977,+ | |||
}} |
Latest revision as of 11:57, 4 August 2015
Short description: | p@chr5:58309965..58309977, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:58309965..58309977, + |
Coexpression cluster: | MCL_coexpression_mm9:581 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.64e-19 | 23 |
circulatory system | 3.64e-19 | 23 |
primary circulatory organ | 1.99e-18 | 18 |
heart | 1.99e-18 | 18 |
primitive heart tube | 1.99e-18 | 18 |
primary heart field | 1.99e-18 | 18 |
anterior lateral plate mesoderm | 1.99e-18 | 18 |
heart tube | 1.99e-18 | 18 |
heart primordium | 1.99e-18 | 18 |
cardiac mesoderm | 1.99e-18 | 18 |
cardiogenic plate | 1.99e-18 | 18 |
heart rudiment | 1.99e-18 | 18 |
occipital lobe | 4.52e-15 | 10 |
visual cortex | 4.52e-15 | 10 |
neocortex | 4.52e-15 | 10 |
splanchnic layer of lateral plate mesoderm | 3.00e-13 | 33 |
structure with developmental contribution from neural crest | 5.90e-12 | 92 |
compound organ | 6.77e-08 | 43 |
tube | 7.22e-08 | 114 |
regional part of cerebral cortex | 8.21e-08 | 17 |
anatomical conduit | 2.34e-07 | 122 |
cerebral cortex | 6.15e-07 | 21 |
cerebral hemisphere | 6.15e-07 | 21 |
pallium | 6.15e-07 | 21 |
epithelial tube | 9.05e-07 | 47 |