FFCP PHASE1:Mm9::chr2:164159141..164159146,+: Difference between revisions
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{{FFCP|EntrezGene=20944|HGNC=|MCL_coexpression_id=44|UniProt=F6RYE9|association_with_transcript=-39bp_to_ENSMUST00000149370_5end|description=CAGE_peak_9_at_Svs5_5end|id=chr2:164159141..164159146,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0010147!1.68e-58!2;UBERON:0003937!1.68e-58!2;UBERON:0005399!1.68e-58!2;UBERON:0000998!2.87e-30!1;UBERON:0007194!2.87e-30!1;UBERON:0006868!2.87e-30!1;UBERON:0002367!5.62e-30!1;UBERON:0009846!5.62e-30!1;UBERON:0003353!5.62e-30!1;UBERON:0004902!5.62e-30!1;UBERON:0003820!5.62e-30!1;UBERON:0009847!5.62e-30!1;UBERON:0000162!5.71e-11!3;UBERON:0001353!5.71e-11!3;UBERON:0000163!5.71e-11!3;UBERON:0006866!5.71e-11!3;UBERON:0001046!5.71e-11!3;UBERON:0000164!5.71e-11!3;UBERON:0000931!5.71e-11!3;UBERON:0003064!1.96e-09!14;UBERON:0000080!1.23e-08!4;UBERON:0005904!1.23e-08!4;UBERON:0006947!1.23e-08!4;UBERON:0002120!1.23e-08!4;UBERON:0004054!1.23e-08!4;UBERON:0004875!1.23e-08!4;UBERON:0004876!1.23e-08!4;UBERON:0005721!1.23e-08!4;UBERON:0005754!1.23e-08!4;UBERON:0007297!1.23e-08!4;UBERON:0006554!2.16e-08!16;UBERON:0003101!2.16e-08!16;UBERON:0000079!2.16e-08!16;UBERON:0001008!5.82e-08!17;UBERON:0000161!4.17e-07!5;UBERON:0004122!4.17e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000998,3.07e-86,1;UBERON:0007194,3.07e-86,1;UBERON:0006868,3.07e-86,1;UBERON:0010147,4.52e-44,2;UBERON:0003937,4.52e-44,2;UBERON:0005399,4.52e-44,2;UBERON:0000080,6.52e-23,4;UBERON:0005904,6.52e-23,4;UBERON:0006947,6.52e-23,4;UBERON:0002120,6.52e-23,4;UBERON:0004054,6.52e-23,4;UBERON:0004875,6.52e-23,4;UBERON:0004876,6.52e-23,4;UBERON:0005721,6.52e-23,4;UBERON:0005754,6.52e-23,4;UBERON:0007297,6.52e-23,4;UBERON:0000058,8.67e-14,7;UBERON:0004175,4.56e-11,9;UBERON:0003887,4.12e-10,10;UBERON:0002113,1.22e-07,14;UBERON:0000473,1.22e-07,14;UBERON:0003918,1.22e-07,14;UBERON:0011143,1.22e-07,14;UBERON:0003064,1.22e-07,14;UBERON:0005095,1.22e-07,14;UBERON:0007687,1.22e-07,14;UBERON:0003135,3.18e-07,15;UBERON:0003101,7.35e-07,16;UBERON:0000079,7.35e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5927541380864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@Svs5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20944 | |||
|HGNC= | |||
|MCL_coexpression_id=44 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6RYE9 | |||
|association_with_transcript=-39bp_to_ENSMUST00000149370_5end | |||
|cluster_id=chr2:164159141..164159146,+ | |||
|description=CAGE_peak_9_at_Svs5_5end | |||
|id=chr2:164159141..164159146,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0010147!1.68e-58!2;UBERON:0003937!1.68e-58!2;UBERON:0005399!1.68e-58!2;UBERON:0000998!2.87e-30!1;UBERON:0007194!2.87e-30!1;UBERON:0006868!2.87e-30!1;UBERON:0002367!5.62e-30!1;UBERON:0009846!5.62e-30!1;UBERON:0003353!5.62e-30!1;UBERON:0004902!5.62e-30!1;UBERON:0003820!5.62e-30!1;UBERON:0009847!5.62e-30!1;UBERON:0000162!5.71e-11!3;UBERON:0001353!5.71e-11!3;UBERON:0000163!5.71e-11!3;UBERON:0006866!5.71e-11!3;UBERON:0001046!5.71e-11!3;UBERON:0000164!5.71e-11!3;UBERON:0000931!5.71e-11!3;UBERON:0003064!1.96e-09!14;UBERON:0000080!1.23e-08!4;UBERON:0005904!1.23e-08!4;UBERON:0006947!1.23e-08!4;UBERON:0002120!1.23e-08!4;UBERON:0004054!1.23e-08!4;UBERON:0004875!1.23e-08!4;UBERON:0004876!1.23e-08!4;UBERON:0005721!1.23e-08!4;UBERON:0005754!1.23e-08!4;UBERON:0007297!1.23e-08!4;UBERON:0006554!2.16e-08!16;UBERON:0003101!2.16e-08!16;UBERON:0000079!2.16e-08!16;UBERON:0001008!5.82e-08!17;UBERON:0000161!4.17e-07!5;UBERON:0004122!4.17e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,3.07e-86,1;UBERON:0007194,3.07e-86,1;UBERON:0006868,3.07e-86,1;UBERON:0010147,4.52e-44,2;UBERON:0003937,4.52e-44,2;UBERON:0005399,4.52e-44,2;UBERON:0000080,6.52e-23,4;UBERON:0005904,6.52e-23,4;UBERON:0006947,6.52e-23,4;UBERON:0002120,6.52e-23,4;UBERON:0004054,6.52e-23,4;UBERON:0004875,6.52e-23,4;UBERON:0004876,6.52e-23,4;UBERON:0005721,6.52e-23,4;UBERON:0005754,6.52e-23,4;UBERON:0007297,6.52e-23,4;UBERON:0000058,8.67e-14,7;UBERON:0004175,4.56e-11,9;UBERON:0003887,4.12e-10,10;UBERON:0002113,1.22e-07,14;UBERON:0000473,1.22e-07,14;UBERON:0003918,1.22e-07,14;UBERON:0011143,1.22e-07,14;UBERON:0003064,1.22e-07,14;UBERON:0005095,1.22e-07,14;UBERON:0007687,1.22e-07,14;UBERON:0003135,3.18e-07,15;UBERON:0003101,7.35e-07,16;UBERON:0000079,7.35e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5927541380864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@Svs5 | |||
}} |
Revision as of 12:14, 4 August 2015
Short description: | p9@Svs5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Svs5_5end |
Coexpression cluster: | MCL_coexpression_mm9:44 |
Association with transcript: | -39bp_to_ENSMUST00000149370_5end |
EntrezGene: | 20944 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 3.07e-86 | 1 |
vesicular gland | 3.07e-86 | 1 |
seminal fluid secreting gland | 3.07e-86 | 1 |
male accessory sex gland | 4.52e-44 | 2 |
sex gland | 4.52e-44 | 2 |
male reproductive gland | 4.52e-44 | 2 |
mesonephros | 6.52e-23 | 4 |
duct of male reproductive system | 6.52e-23 | 4 |
male genital duct | 6.52e-23 | 4 |
pronephros | 6.52e-23 | 4 |
internal male genitalia | 6.52e-23 | 4 |
nephrogenic cord | 6.52e-23 | 4 |
urogenital ridge | 6.52e-23 | 4 |
pronephric mesoderm | 6.52e-23 | 4 |
rostral part of nephrogenic cord | 6.52e-23 | 4 |
presumptive pronephric mesoderm | 6.52e-23 | 4 |
duct | 8.67e-14 | 7 |
internal genitalia | 4.56e-11 | 9 |
intraembryonic coelom | 4.12e-10 | 10 |
kidney | 1.22e-07 | 14 |
testis | 1.22e-07 | 14 |
kidney mesenchyme | 1.22e-07 | 14 |
upper urinary tract | 1.22e-07 | 14 |
intermediate mesoderm | 1.22e-07 | 14 |
kidney rudiment | 1.22e-07 | 14 |
kidney field | 1.22e-07 | 14 |
male reproductive organ | 3.18e-07 | 15 |
male organism | 7.35e-07 | 16 |
male reproductive system | 7.35e-07 | 16 |