FFCP PHASE1:Mm9::chr4:114729646..114729665,+: Difference between revisions
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{{FFCP|EntrezGene=21349|HGNC=|MCL_coexpression_id=26|UniProt=A2AD40|association_with_transcript=-377bp_to_ENSMUST00000136946_5end|description=CAGE_peak_4_at_Tal1_5end|id=chr4:114729646..114729665,+|ontology_enrichment_celltype=CL:0000049!9.19e-07!19|ontology_enrichment_celltype_v019_2=CL:0000049,3.97e-13,19;CL:0000763,5.87e-10,16;CL:0000557,3.83e-09,7;CL:0002320,5.69e-08,46;CL:0000134,5.69e-08,46;CL:0000839,2.24e-07,13;CL:0000988,6.79e-07,32;CL:0002032,6.79e-07,32;CL:0000037,6.79e-07,32;CL:0000837,6.79e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.77e-12,16;UBERON:0001474,1.31e-10,22;UBERON:0004765,1.31e-10,22;UBERON:0001434,1.31e-10,22;UBERON:0002048,1.41e-08,14;UBERON:0000117,1.41e-08,14;UBERON:0000171,1.41e-08,14;UBERON:0000170,1.41e-08,14;UBERON:0005597,1.41e-08,14;UBERON:0000118,1.41e-08,14;UBERON:0003914,3.72e-08,47;UBERON:0002384,5.69e-08,46;UBERON:0002204,8.39e-08,32;UBERON:0003081,7.14e-07,87;UBERON:0004535,8.89e-07,23;UBERON:0001009,8.89e-07,23|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.21485160433896,2.79824751251259,0,0.274228867211478,0.42438965179803,1.10556277196391,0,0,0,0,0,0,0,0,0,0,7.62036808151557,4.92051830067656,0,0,0,0,0.418531630736908,0,1.0470474879476,1.76469446409304,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0.404632921719196,1.05798195854407,1.90149421051854,0,0,5.39939830368839,4.94433181283487,2.8419204597844,3.29560121570245,1.92109152660777,0.207379224616955,0.405017814995072,0.420649922702764,0,0.662605622854841,0,0.0958454710182364,0,2.20231761998777,0.766124028511126,0,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0.763991238884051,0.589257170947335,0.427115042397309,0.186399445825301,0,0,18.8411917656091,3.44169550792555,0,0,0.649776417447669,0.896053774194671,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.23517741427141,0.251333182659351,0.494389935468748,1.15679485535929,1.76922110389975,0.808834249737046,0.883366073841574,2.42437626567611,0,0.292780797011547,0.41889341362691,0,1.67741174308288,4.79922184794726,2.79554499560742,0.748953197024114,0,0.251308704225729,0.173824320192276,0,0.41557608911912,1.1356888414743,0.101839363850316,0.497627882440372,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0.189106080167819,0.879755620819744,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0,2.1066395619397,2.57347907114715,1.13665399758237,1.03562886267751,1.40715635988658,1.62055855314913,1.42046841351126,0.393528463494808,1.3884040159864,1.16266972375204,1.3413670069981,0.583826711835847,0.822799249567402,2.13417703302824,1.86458261955468,3.21639972335731,1.3173006917463,1.34206418760372,0.630869845692382,0.205809224758569,0,0.528901133327089,1.06644125267617,0.696710015581316,0.128867461322093,0.403367049246685,0,0.190225626112559,0.474529061544512,0.494096864172033,0,0.795825888164603,0.58489226135736,0,0.216138049874694,0.398282546508734,0.379335801906163,0.342745537829186,0,0.203651327845314,0.775809948670503,0.210407459670956,0.569128834118316,0.590440591918409,0.627994911365499,0.246794327843601,0.296452627087149,2.00214126859313,2.16214894624523,1.79889689907883,2.63718157805054,1.20588579876208,1.2731292589071,0.863088412352432,1.13494658742525,0.549122826376163,1.43768206527355,0.744281895337007,0.624075346229121,1.01031551178845,0.717589654087649,0.482443521363367,2.40179147216586,0.568474235311454,0.325929952884052,0.678980343100753,0.469380496577004,1.84256883185997,2.85652369063216,2.34160377429359,2.36452716159286,2.43611158613652,2.87018583583477,4.58817281204066,4.48980952851328,3.90552458170081,9.04747703635634,3.80733978673097,0.491764273019036,0.551873492609465,0.160550589987792,0.117211686592203,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.712262414669021,0,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0.885905678642318,0.922305443831782,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.776152102696527,0.857348140126369,0.532020700926821,0.713475270408282,0.822745103010605,0.304464949114599,0.938686832254841,0.63549621259146,0.220528398054962,0.32977250588296,0.968786560175433,0.422190474497091,0.119372344003136,0.164140899745061,0.874442509889552,0,0.512612642393558,1.44470807574256,1.29636169158798,1.13021074202815,0.683471138605126,0.686334519619568,4.07948231985253,3.21888340344413,2.62579950228405,0,0.474503990371703,0.813277868507395,0.756037385752609,0.627264888043406,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0,0.777804753376191,0.516639293910924,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21349 | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AD40 | |||
|association_with_transcript=-377bp_to_ENSMUST00000136946_5end | |||
|cluster_id=chr4:114729646..114729665,+ | |||
|description=CAGE_peak_4_at_Tal1_5end | |||
|id=chr4:114729646..114729665,+ | |||
|ontology_enrichment_celltype=CL:0000049!9.19e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.97e-13,19;CL:0000763,5.87e-10,16;CL:0000557,3.83e-09,7;CL:0002320,5.69e-08,46;CL:0000134,5.69e-08,46;CL:0000839,2.24e-07,13;CL:0000988,6.79e-07,32;CL:0002032,6.79e-07,32;CL:0000037,6.79e-07,32;CL:0000837,6.79e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.77e-12,16;UBERON:0001474,1.31e-10,22;UBERON:0004765,1.31e-10,22;UBERON:0001434,1.31e-10,22;UBERON:0002048,1.41e-08,14;UBERON:0000117,1.41e-08,14;UBERON:0000171,1.41e-08,14;UBERON:0000170,1.41e-08,14;UBERON:0005597,1.41e-08,14;UBERON:0000118,1.41e-08,14;UBERON:0003914,3.72e-08,47;UBERON:0002384,5.69e-08,46;UBERON:0002204,8.39e-08,32;UBERON:0003081,7.14e-07,87;UBERON:0004535,8.89e-07,23;UBERON:0001009,8.89e-07,23 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.21485160433896,2.79824751251259,0,0.274228867211478,0.42438965179803,1.10556277196391,0,0,0,0,0,0,0,0,0,0,7.62036808151557,4.92051830067656,0,0,0,0,0.418531630736908,0,1.0470474879476,1.76469446409304,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0.404632921719196,1.05798195854407,1.90149421051854,0,0,5.39939830368839,4.94433181283487,2.8419204597844,3.29560121570245,1.92109152660777,0.207379224616955,0.405017814995072,0.420649922702764,0,0.662605622854841,0,0.0958454710182364,0,2.20231761998777,0.766124028511126,0,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0.763991238884051,0.589257170947335,0.427115042397309,0.186399445825301,0,0,18.8411917656091,3.44169550792555,0,0,0.649776417447669,0.896053774194671,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.23517741427141,0.251333182659351,0.494389935468748,1.15679485535929,1.76922110389975,0.808834249737046,0.883366073841574,2.42437626567611,0,0.292780797011547,0.41889341362691,0,1.67741174308288,4.79922184794726,2.79554499560742,0.748953197024114,0,0.251308704225729,0.173824320192276,0,0.41557608911912,1.1356888414743,0.101839363850316,0.497627882440372,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0.189106080167819,0.879755620819744,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0,2.1066395619397,2.57347907114715,1.13665399758237,1.03562886267751,1.40715635988658,1.62055855314913,1.42046841351126,0.393528463494808,1.3884040159864,1.16266972375204,1.3413670069981,0.583826711835847,0.822799249567402,2.13417703302824,1.86458261955468,3.21639972335731,1.3173006917463,1.34206418760372,0.630869845692382,0.205809224758569,0,0.528901133327089,1.06644125267617,0.696710015581316,0.128867461322093,0.403367049246685,0,0.190225626112559,0.474529061544512,0.494096864172033,0,0.795825888164603,0.58489226135736,0,0.216138049874694,0.398282546508734,0.379335801906163,0.342745537829186,0,0.203651327845314,0.775809948670503,0.210407459670956,0.569128834118316,0.590440591918409,0.627994911365499,0.246794327843601,0.296452627087149,2.00214126859313,2.16214894624523,1.79889689907883,2.63718157805054,1.20588579876208,1.2731292589071,0.863088412352432,1.13494658742525,0.549122826376163,1.43768206527355,0.744281895337007,0.624075346229121,1.01031551178845,0.717589654087649,0.482443521363367,2.40179147216586,0.568474235311454,0.325929952884052,0.678980343100753,0.469380496577004,1.84256883185997,2.85652369063216,2.34160377429359,2.36452716159286,2.43611158613652,2.87018583583477,4.58817281204066,4.48980952851328,3.90552458170081,9.04747703635634,3.80733978673097,0.491764273019036,0.551873492609465,0.160550589987792,0.117211686592203,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.712262414669021,0,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0.885905678642318,0.922305443831782,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.776152102696527,0.857348140126369,0.532020700926821,0.713475270408282,0.822745103010605,0.304464949114599,0.938686832254841,0.63549621259146,0.220528398054962,0.32977250588296,0.968786560175433,0.422190474497091,0.119372344003136,0.164140899745061,0.874442509889552,0,0.512612642393558,1.44470807574256,1.29636169158798,1.13021074202815,0.683471138605126,0.686334519619568,4.07948231985253,3.21888340344413,2.62579950228405,0,0.474503990371703,0.813277868507395,0.756037385752609,0.627264888043406,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0,0.777804753376191,0.516639293910924,0,0.234714477291508,0.2604087696879,0,0,0.288030006257865,0,0,0.308132871494482,0.129920822977795,0.537080087002444,0,0,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0.643105137237198,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0,0,0,0,0.31136204275253,0.798049746802062,0.682934423016537,1.21553358534147,0.209613162627982,0.367687016900028,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0.25347929989024,1.50901073108861,0.37456602987953,0.576226371643824,0.689225627467359,0,1.62238056322798,0,0.824171801606613,0.883193520806384,0.685738504770831,0.70990322463735,0.715308569841963,1.45346416632329,0.564656282491984,0.507687647350059,0.365855945745545,1.05227884575137,0.950628796921032,0.561142271657738,0.593175090620871,0.788035859004508,0.818462086339379,0.464810523557898,0.771626443924566,0.499621155875892,1.63752125911786,0.214871054048298,0.382576664137687,0.882365676478062,0.927471342481686 | |||
|short_description=p4@Tal1 | |||
}} |
Revision as of 13:54, 4 August 2015
Short description: | p4@Tal1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tal1_5end |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | -377bp_to_ENSMUST00000136946_5end |
EntrezGene: | 21349 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.97e-13 | 19 |
myeloid cell | 5.87e-10 | 16 |
granulocyte monocyte progenitor cell | 3.83e-09 | 7 |
connective tissue cell | 5.69e-08 | 46 |
mesenchymal cell | 5.69e-08 | 46 |
myeloid lineage restricted progenitor cell | 2.24e-07 | 13 |
hematopoietic cell | 6.79e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.79e-07 | 32 |
hematopoietic stem cell | 6.79e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.79e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.77e-12 | 16 |
bone element | 1.31e-10 | 22 |
skeletal element | 1.31e-10 | 22 |
skeletal system | 1.31e-10 | 22 |
lung | 1.41e-08 | 14 |
respiratory tube | 1.41e-08 | 14 |
respiration organ | 1.41e-08 | 14 |
pair of lungs | 1.41e-08 | 14 |
lung primordium | 1.41e-08 | 14 |
lung bud | 1.41e-08 | 14 |
epithelial tube | 3.72e-08 | 47 |
connective tissue | 5.69e-08 | 46 |
musculoskeletal system | 8.39e-08 | 32 |
lateral plate mesoderm | 7.14e-07 | 87 |
cardiovascular system | 8.89e-07 | 23 |
circulatory system | 8.89e-07 | 23 |