FFCP PHASE1:Mm9::chr10:7559485..7559510,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:7559485..7559510,+|id=chr10:7559485..7559510,+|ontology_enrichment_celltype=CL:0000553!2.41e-09!6;CL:0000556!2.41e-09!6;CL:0000988!1.61e-07!32;CL:0002032!1.61e-07!32;CL:0000037!1.61e-07!32;CL:0000566!1.61e-07!32;CL:0000837!1.61e-07!32;CL:0000063!1.81e-07!66;CL:0002031!3.42e-07!25|ontology_enrichment_celltype_v019_2=CL:0000553,3.83e-16,6;CL:0000556,3.83e-16,6;CL:0002031,1.75e-13,25;CL:0000050,1.09e-10,9;CL:0000988,3.62e-10,32;CL:0002032,3.62e-10,32;CL:0000037,3.62e-10,32;CL:0000837,3.62e-10,32;CL:0000893,1.00e-09,6;CL:0002489,1.00e-09,6;CL:0000898,1.00e-09,6;CL:0000809,1.00e-09,6;CL:0000810,1.00e-09,6;CL:0000895,1.00e-09,6;CL:0000808,1.00e-09,6;CL:0000894,1.00e-09,6;CL:0000806,1.00e-09,6;CL:0000807,1.00e-09,6;CL:0000805,1.00e-09,6;CL:0002425,1.00e-09,6;CL:0002436,1.00e-09,6;CL:0002427,1.00e-09,6;CL:0002428,1.00e-09,6;CL:0002429,1.00e-09,6;CL:0002433,1.00e-09,6;CL:0002431,1.00e-09,6;CL:0002432,1.00e-09,6;CL:0000838,1.76e-07,12;CL:0000624,2.52e-07,8;CL:0000839,2.57e-07,13;CL:0000542,6.89e-07,13;CL:0000051,6.89e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!3.43e-13!24;UBERON:0002193!3.58e-13!48;UBERON:0000344!5.90e-13!15;UBERON:0001242!1.85e-10!13;UBERON:0000060!1.85e-10!13;UBERON:0001262!1.85e-10!13;UBERON:0004786!1.85e-10!13;UBERON:0002390!2.45e-10!45;UBERON:0003061!2.45e-10!45;UBERON:0001007!5.26e-08!128;UBERON:0001555!5.26e-08!128;UBERON:0007026!5.26e-08!128;UBERON:0004177!7.69e-08!29;UBERON:0004119!1.03e-07!130;UBERON:0000925!1.03e-07!130;UBERON:0006595!1.03e-07!130;UBERON:0002405!2.37e-07!70;UBERON:0004921!7.14e-07!126;UBERON:0004185!7.14e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.75e-17,48;UBERON:0002405,2.75e-17,48;UBERON:0004923,6.38e-14,24;UBERON:0002465,1.95e-12,3;UBERON:0002390,9.56e-12,45;UBERON:0003061,9.56e-12,45;UBERON:0002106,2.84e-10,6;UBERON:0004457,2.84e-10,6;UBERON:0000042,2.84e-10,6;UBERON:0004854,2.84e-10,6;UBERON:0009034,2.84e-10,6;UBERON:0002095,2.84e-10,6;UBERON:0004782,2.84e-10,6;UBERON:0003281,2.84e-10,6;UBERON:0009664,2.84e-10,6;UBERON:0002296,2.84e-10,6;UBERON:0005602,2.84e-10,6;UBERON:0001179,2.84e-10,6;UBERON:0006293,2.84e-10,6;UBERON:0001962,1.38e-08,2;UBERON:0001961,1.38e-08,2;UBERON:0001744,1.38e-08,2;UBERON:0000344,2.01e-08,15;UBERON:0004177,5.19e-07,29;UBERON:0005057,5.19e-07,29|phase1_expression=0,0.697950815278722,1.36499771816861,0,0.500895729946347,1.6787927191189,1.16806320297763,0.387369970324729,1.12630977721333,1.40438715793196,2.22583358693156,1.27635454392538,0,0.262261207256992,1.99865857089398,1.21485160433896,0.699561878128147,9.77932712610537,9.46089591879598,5.51706547337439,0,0,0,2.55987876469451,1.83527424853736,0.57423196411502,1.29228598847722,2.15471232685889,0.760093677825496,0.252030129759931,2.88249663851896,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,6.20795642413625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7237078333001,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,1.53274233125155,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0.758168275301024,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0.898819408654221,0,0.597423819763102,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,0,2.56306321196779,0,0,1.31857919903284,1.50363650493128,2.97411625168479,0,0.279902904647316,0.690999869022119,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.632022241256357,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0.381034033274999,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:7559485..7559510,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:7559485..7559510,+ | |||
|description=CAGE_peak_at_chr10:7559485..7559510,+ | |||
|id=chr10:7559485..7559510,+ | |||
|ontology_enrichment_celltype=CL:0000553!2.41e-09!6;CL:0000556!2.41e-09!6;CL:0000988!1.61e-07!32;CL:0002032!1.61e-07!32;CL:0000037!1.61e-07!32;CL:0000566!1.61e-07!32;CL:0000837!1.61e-07!32;CL:0000063!1.81e-07!66;CL:0002031!3.42e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.83e-16,6;CL:0000556,3.83e-16,6;CL:0002031,1.75e-13,25;CL:0000050,1.09e-10,9;CL:0000988,3.62e-10,32;CL:0002032,3.62e-10,32;CL:0000037,3.62e-10,32;CL:0000837,3.62e-10,32;CL:0000893,1.00e-09,6;CL:0002489,1.00e-09,6;CL:0000898,1.00e-09,6;CL:0000809,1.00e-09,6;CL:0000810,1.00e-09,6;CL:0000895,1.00e-09,6;CL:0000808,1.00e-09,6;CL:0000894,1.00e-09,6;CL:0000806,1.00e-09,6;CL:0000807,1.00e-09,6;CL:0000805,1.00e-09,6;CL:0002425,1.00e-09,6;CL:0002436,1.00e-09,6;CL:0002427,1.00e-09,6;CL:0002428,1.00e-09,6;CL:0002429,1.00e-09,6;CL:0002433,1.00e-09,6;CL:0002431,1.00e-09,6;CL:0002432,1.00e-09,6;CL:0000838,1.76e-07,12;CL:0000624,2.52e-07,8;CL:0000839,2.57e-07,13;CL:0000542,6.89e-07,13;CL:0000051,6.89e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.43e-13!24;UBERON:0002193!3.58e-13!48;UBERON:0000344!5.90e-13!15;UBERON:0001242!1.85e-10!13;UBERON:0000060!1.85e-10!13;UBERON:0001262!1.85e-10!13;UBERON:0004786!1.85e-10!13;UBERON:0002390!2.45e-10!45;UBERON:0003061!2.45e-10!45;UBERON:0001007!5.26e-08!128;UBERON:0001555!5.26e-08!128;UBERON:0007026!5.26e-08!128;UBERON:0004177!7.69e-08!29;UBERON:0004119!1.03e-07!130;UBERON:0000925!1.03e-07!130;UBERON:0006595!1.03e-07!130;UBERON:0002405!2.37e-07!70;UBERON:0004921!7.14e-07!126;UBERON:0004185!7.14e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.75e-17,48;UBERON:0002405,2.75e-17,48;UBERON:0004923,6.38e-14,24;UBERON:0002465,1.95e-12,3;UBERON:0002390,9.56e-12,45;UBERON:0003061,9.56e-12,45;UBERON:0002106,2.84e-10,6;UBERON:0004457,2.84e-10,6;UBERON:0000042,2.84e-10,6;UBERON:0004854,2.84e-10,6;UBERON:0009034,2.84e-10,6;UBERON:0002095,2.84e-10,6;UBERON:0004782,2.84e-10,6;UBERON:0003281,2.84e-10,6;UBERON:0009664,2.84e-10,6;UBERON:0002296,2.84e-10,6;UBERON:0005602,2.84e-10,6;UBERON:0001179,2.84e-10,6;UBERON:0006293,2.84e-10,6;UBERON:0001962,1.38e-08,2;UBERON:0001961,1.38e-08,2;UBERON:0001744,1.38e-08,2;UBERON:0000344,2.01e-08,15;UBERON:0004177,5.19e-07,29;UBERON:0005057,5.19e-07,29 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0,0.500895729946347,1.6787927191189,1.16806320297763,0.387369970324729,1.12630977721333,1.40438715793196,2.22583358693156,1.27635454392538,0,0.262261207256992,1.99865857089398,1.21485160433896,0.699561878128147,9.77932712610537,9.46089591879598,5.51706547337439,0,0,0,2.55987876469451,1.83527424853736,0.57423196411502,1.29228598847722,2.15471232685889,0.760093677825496,0.252030129759931,2.88249663851896,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,6.20795642413625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7237078333001,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,1.53274233125155,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0.758168275301024,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0.898819408654221,0,0.597423819763102,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,0,2.56306321196779,0,0,1.31857919903284,1.50363650493128,2.97411625168479,0,0.279902904647316,0.690999869022119,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.632022241256357,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0.381034033274999,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:7559485..7559510,+ | |||
}} |
Latest revision as of 17:08, 4 August 2015
Short description: | p@chr10:7559485..7559510, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:7559485..7559510, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.75e-17 | 48 |
immune system | 2.75e-17 | 48 |
organ component layer | 6.38e-14 | 24 |
lymphoid system | 1.95e-12 | 3 |
hematopoietic system | 9.56e-12 | 45 |
blood island | 9.56e-12 | 45 |
spleen | 2.84e-10 | 6 |
cavity lining | 2.84e-10 | 6 |
serous membrane | 2.84e-10 | 6 |
gastrointestinal system mesentery | 2.84e-10 | 6 |
stomach region | 2.84e-10 | 6 |
mesentery | 2.84e-10 | 6 |
gastrointestinal system serosa | 2.84e-10 | 6 |
mesentery of stomach | 2.84e-10 | 6 |
gut mesentery | 2.84e-10 | 6 |
dorsal mesentery | 2.84e-10 | 6 |
dorsal mesogastrium | 2.84e-10 | 6 |
peritoneal cavity | 2.84e-10 | 6 |
spleen primordium | 2.84e-10 | 6 |
gut-associated lymphoid tissue | 1.38e-08 | 2 |
mucosa-associated lymphoid tissue | 1.38e-08 | 2 |
lymphoid tissue | 1.38e-08 | 2 |
mucosa | 2.01e-08 | 15 |
hemopoietic organ | 5.19e-07 | 29 |
immune organ | 5.19e-07 | 29 |