FFCP PHASE1:Mm9::chr1:132745011..132745023,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=430|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:132745011..132745023,+|id=chr1:132745011..132745023,+|ontology_enrichment_celltype=CL:0000066!7.18e-17!25;CL:0002563!9.42e-17!9;CL:0002251!9.42e-17!9;CL:0000223!2.50e-14!20;CL:0000239!1.10e-11!6;CL:0000677!1.10e-11!6;CL:0000212!1.10e-11!6;CL:0000584!1.10e-11!6;CL:0000075!6.63e-10!7;CL:0002076!2.47e-09!15;CL:0000181!9.44e-07!5;CL:0000417!9.44e-07!5;CL:0000668!9.44e-07!5;CL:0000412!9.44e-07!5;CL:0000182!9.44e-07!5|ontology_enrichment_celltype_v019_2=CL:0002563,6.10e-12,9;CL:0002251,6.10e-12,9;CL:0002250,1.86e-09,3;CL:0000223,5.73e-09,20;CL:0000066,9.09e-09,25;CL:0002076,6.08e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.45e-28!15;UBERON:0001242!2.09e-24!13;UBERON:0000060!2.09e-24!13;UBERON:0001262!2.09e-24!13;UBERON:0004786!2.09e-24!13;UBERON:0000160!3.65e-20!43;UBERON:0003350!9.42e-17!9;UBERON:0004808!9.42e-17!9;UBERON:0001277!9.42e-17!9;UBERON:0004923!2.91e-16!24;UBERON:0005409!1.24e-14!59;UBERON:0000485!2.24e-13!11;UBERON:0001007!6.57e-13!128;UBERON:0001555!6.57e-13!128;UBERON:0007026!6.57e-13!128;UBERON:0004119!1.41e-12!130;UBERON:0000925!1.41e-12!130;UBERON:0006595!1.41e-12!130;UBERON:0004921!4.17e-11!126;UBERON:0004185!4.17e-11!126;UBERON:0002365!1.72e-07!25;UBERON:0002330!1.72e-07!25;UBERON:0000331!2.93e-07!3;UBERON:0002116!2.93e-07!3;UBERON:0001204!2.93e-07!3;UBERON:0001168!2.93e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.18e-27,31;UBERON:0000344,3.58e-24,15;UBERON:0005409,6.37e-19,47;UBERON:0001242,1.08e-18,13;UBERON:0001262,1.08e-18,13;UBERON:0004786,1.08e-18,13;UBERON:0004923,2.44e-14,24;UBERON:0001007,4.46e-13,116;UBERON:0001555,4.46e-13,116;UBERON:0007026,4.46e-13,116;UBERON:0004119,8.93e-13,118;UBERON:0000925,8.93e-13,118;UBERON:0006595,8.93e-13,118;UBERON:0003350,6.10e-12,9;UBERON:0004808,6.10e-12,9;UBERON:0001277,6.10e-12,9;UBERON:0004921,9.12e-11,114;UBERON:0000485,1.14e-09,11;UBERON:0002108,2.79e-08,4;UBERON:0001155,1.16e-07,2;UBERON:0000059,1.16e-07,2;UBERON:0001962,1.46e-07,2;UBERON:0001961,1.46e-07,2;UBERON:0001744,1.46e-07,2|phase1_expression=0,2.44282785347553,0.909998478779072,1.51232105653415,3.00537437967808,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.03985603307473,1.83527424853736,0.57423196411502,0.86152399231815,1.72376986148711,5.32065574477847,4.03248207615889,0.665191531965914,0,0,0,1.1554064790051,1.82858109894342,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,1.3599426674155,5.39703191637817,0.649776417447669,0.896053774194671,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.05780226665418,0,0,0,0,0,0,1.42358718463353,0,0.251335208800269,0,0.19496408711912,4.49409704327111,4.97117514711797,2.58883655230677,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95058563811422,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36998930558661,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:132745011..132745023,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=430 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:132745011..132745023,+ | |||
|description=CAGE_peak_at_chr1:132745011..132745023,+ | |||
|id=chr1:132745011..132745023,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.18e-17!25;CL:0002563!9.42e-17!9;CL:0002251!9.42e-17!9;CL:0000223!2.50e-14!20;CL:0000239!1.10e-11!6;CL:0000677!1.10e-11!6;CL:0000212!1.10e-11!6;CL:0000584!1.10e-11!6;CL:0000075!6.63e-10!7;CL:0002076!2.47e-09!15;CL:0000181!9.44e-07!5;CL:0000417!9.44e-07!5;CL:0000668!9.44e-07!5;CL:0000412!9.44e-07!5;CL:0000182!9.44e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.10e-12,9;CL:0002251,6.10e-12,9;CL:0002250,1.86e-09,3;CL:0000223,5.73e-09,20;CL:0000066,9.09e-09,25;CL:0002076,6.08e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.45e-28!15;UBERON:0001242!2.09e-24!13;UBERON:0000060!2.09e-24!13;UBERON:0001262!2.09e-24!13;UBERON:0004786!2.09e-24!13;UBERON:0000160!3.65e-20!43;UBERON:0003350!9.42e-17!9;UBERON:0004808!9.42e-17!9;UBERON:0001277!9.42e-17!9;UBERON:0004923!2.91e-16!24;UBERON:0005409!1.24e-14!59;UBERON:0000485!2.24e-13!11;UBERON:0001007!6.57e-13!128;UBERON:0001555!6.57e-13!128;UBERON:0007026!6.57e-13!128;UBERON:0004119!1.41e-12!130;UBERON:0000925!1.41e-12!130;UBERON:0006595!1.41e-12!130;UBERON:0004921!4.17e-11!126;UBERON:0004185!4.17e-11!126;UBERON:0002365!1.72e-07!25;UBERON:0002330!1.72e-07!25;UBERON:0000331!2.93e-07!3;UBERON:0002116!2.93e-07!3;UBERON:0001204!2.93e-07!3;UBERON:0001168!2.93e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.18e-27,31;UBERON:0000344,3.58e-24,15;UBERON:0005409,6.37e-19,47;UBERON:0001242,1.08e-18,13;UBERON:0001262,1.08e-18,13;UBERON:0004786,1.08e-18,13;UBERON:0004923,2.44e-14,24;UBERON:0001007,4.46e-13,116;UBERON:0001555,4.46e-13,116;UBERON:0007026,4.46e-13,116;UBERON:0004119,8.93e-13,118;UBERON:0000925,8.93e-13,118;UBERON:0006595,8.93e-13,118;UBERON:0003350,6.10e-12,9;UBERON:0004808,6.10e-12,9;UBERON:0001277,6.10e-12,9;UBERON:0004921,9.12e-11,114;UBERON:0000485,1.14e-09,11;UBERON:0002108,2.79e-08,4;UBERON:0001155,1.16e-07,2;UBERON:0000059,1.16e-07,2;UBERON:0001962,1.46e-07,2;UBERON:0001961,1.46e-07,2;UBERON:0001744,1.46e-07,2 | |||
|phase1_expression=0,2.44282785347553,0.909998478779072,1.51232105653415,3.00537437967808,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.03985603307473,1.83527424853736,0.57423196411502,0.86152399231815,1.72376986148711,5.32065574477847,4.03248207615889,0.665191531965914,0,0,0,1.1554064790051,1.82858109894342,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,1.3599426674155,5.39703191637817,0.649776417447669,0.896053774194671,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.05780226665418,0,0,0,0,0,0,1.42358718463353,0,0.251335208800269,0,0.19496408711912,4.49409704327111,4.97117514711797,2.58883655230677,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95058563811422,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36998930558661,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:132745011..132745023,+ | |||
}} |
Latest revision as of 17:52, 4 August 2015
Short description: | p@chr1:132745011..132745023, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132745011..132745023, + |
Coexpression cluster: | MCL_coexpression_mm9:430 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.10e-12 | 9 |
epithelial cell of alimentary canal | 6.10e-12 | 9 |
intestinal crypt stem cell | 1.86e-09 | 3 |
endodermal cell | 5.73e-09 | 20 |
epithelial cell | 9.09e-09 | 25 |
endo-epithelial cell | 6.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.18e-27 | 31 |
mucosa | 3.58e-24 | 15 |
gastrointestinal system | 6.37e-19 | 47 |
intestinal mucosa | 1.08e-18 | 13 |
wall of intestine | 1.08e-18 | 13 |
gastrointestinal system mucosa | 1.08e-18 | 13 |
organ component layer | 2.44e-14 | 24 |
digestive system | 4.46e-13 | 116 |
digestive tract | 4.46e-13 | 116 |
primitive gut | 4.46e-13 | 116 |
endoderm-derived structure | 8.93e-13 | 118 |
endoderm | 8.93e-13 | 118 |
presumptive endoderm | 8.93e-13 | 118 |
epithelium of mucosa | 6.10e-12 | 9 |
gastrointestinal system epithelium | 6.10e-12 | 9 |
intestinal epithelium | 6.10e-12 | 9 |
subdivision of digestive tract | 9.12e-11 | 114 |
simple columnar epithelium | 1.14e-09 | 11 |
small intestine | 2.79e-08 | 4 |
colon | 1.16e-07 | 2 |
large intestine | 1.16e-07 | 2 |
gut-associated lymphoid tissue | 1.46e-07 | 2 |
mucosa-associated lymphoid tissue | 1.46e-07 | 2 |
lymphoid tissue | 1.46e-07 | 2 |