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FFCP PHASE1:Mm9::chr17:35400032..35400045,+: Difference between revisions

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{{FFCP|EntrezGene=14964|HGNC=|MCL_coexpression_id=718|UniProt=E9QQ06,P01899,Q792Z7,Q31151,Q8R3Y0|association_with_transcript=0bp_to_ENSMUST00000087173,NM_010380,uc008chf.1,uc008chg.1_5end|description=CAGE_peak_1_at_H2-D1_5end|id=chr17:35400032..35400045,+|ontology_enrichment_celltype=CL:0000063!3.00e-14!66;CL:0000219!4.71e-12!54;CL:0002320!6.86e-11!46;CL:0000134!6.86e-11!46;CL:0000144!3.95e-10!121;CL:0000012!3.95e-10!121;CL:0000988!2.06e-09!32;CL:0002032!2.06e-09!32;CL:0000037!2.06e-09!32;CL:0000566!2.06e-09!32;CL:0000837!2.06e-09!32;CL:0002371!5.14e-09!118;CL:0002031!3.51e-08!25;CL:0000548!7.30e-08!115;CL:0000004!7.30e-08!115;CL:0000255!7.30e-08!115;CL:0000738!1.50e-07!17;CL:0002087!1.50e-07!17;CL:0000838!9.40e-07!12|ontology_enrichment_celltype_v019_2=CL:0000219,4.71e-12,54;CL:0002320,6.86e-11,46;CL:0000134,6.86e-11,46;CL:0000988,2.06e-09,32;CL:0002032,2.06e-09,32;CL:0000037,2.06e-09,32;CL:0000837,2.06e-09,32;CL:0002031,3.51e-08,25;CL:0000738,1.50e-07,17;CL:0002087,1.50e-07,17;CL:0000838,9.40e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.20e-12!70;UBERON:0004119!4.82e-12!130;UBERON:0000925!4.82e-12!130;UBERON:0006595!4.82e-12!130;UBERON:0001007!1.74e-11!128;UBERON:0001555!1.74e-11!128;UBERON:0007026!1.74e-11!128;UBERON:0002193!5.90e-11!48;UBERON:0002384!6.86e-11!46;UBERON:0004921!1.11e-10!126;UBERON:0004185!1.11e-10!126;UBERON:0002390!1.10e-09!45;UBERON:0003061!1.10e-09!45;UBERON:0002371!2.02e-08!16;UBERON:0004923!2.90e-08!24;UBERON:0000344!1.26e-07!15;UBERON:0003929!2.23e-07!55;UBERON:0005911!9.67e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.18e-12,118;UBERON:0000925,1.18e-12,118;UBERON:0006595,1.18e-12,118;UBERON:0001007,4.38e-12,116;UBERON:0001555,4.38e-12,116;UBERON:0007026,4.38e-12,116;UBERON:0004921,2.95e-11,114;UBERON:0002193,5.90e-11,48;UBERON:0002405,5.90e-11,48;UBERON:0002384,6.86e-11,46;UBERON:0002390,1.10e-09,45;UBERON:0003061,1.10e-09,45;UBERON:0002371,2.02e-08,16;UBERON:0004923,2.90e-08,24;UBERON:0000344,1.26e-07,15;UBERON:0003929,2.23e-07,55;UBERON:0000160,9.46e-07,31;UBERON:0005911,9.67e-07,69|phase1_expression=2.88267924788629,2896.84485881434,2772.76536483983,1486.00667015046,2347.19739052858,675.042552357709,591.740818628467,1601.38745732243,1842.92437296532,2093.47312342391,440.886268180675,406.518922240234,1177.51862046683,1468.92502184641,334.10909110111,328.009933171518,233.653667294801,953.484394795273,821.315457298375,905.647516936996,238.036169132844,255.177744586275,314.484546123278,715.486114732115,1015.82429656543,2241.22735594092,1716.58655469391,1550.53099040766,1344.79573949276,1509.40844713223,1462.9779093037,24.7661962649256,42.4394703433353,0,140.381887199119,167.398287876002,152.718678484252,1757.83284909501,1355.61682274879,1138.14061939904,2650.57108506775,2170.03550571298,1699.77174596207,15.8629990649227,16.3216859263418,4.77221555620372,701.022644535843,109.666653659365,312.393751848419,282.506643354934,239.936726665871,64.6886539642372,971.125723862178,1378.91343196357,1094.32141000786,129.401496326081,201.719541716885,530.110910861211,39.4517098676216,30.6814767977779,29.7900759647904,185.347959041815,124.50127145556,5497.03742301343,4424.18810612464,5639.0806723272,757.089479280009,629.733802422028,15.0349937847293,20.9259204414121,13.2504725651371,64.2714714908558,98.5073692644196,13.5964787128599,14.3768206527355,12.8690630125403,74.8787990795843,78.4000255843053,43.6242554447731,32.4440267816277,59.7414312723735,27.0874952689515,98.8307816464889,93.9813558752905,148.367098591283,39.7748590389451,46.1284245789094,67.8493982804094,232.630865919541,260.94859704873,616.541767468469,1009.27720769917,1849.52202768508,521.892986313769,399.612496730316,355.733348355284,202.80174267025,4.60161870960756,5.71529210126311,4.94675404314476,16.6195235336483,75.7126216744475,84.0857291031931,63.9960032837998,178.821599875263,182.419103142071,190.077191325559,411.061966988616,518.393643061638,357.893997285293,13.8788261412909,15.8322048722313,27.443244173471,36.324156373182,46.3299506114677,171.157897391018,209.374137671015,316.672591654606,301.652198214907,61.3096361300681,160.330942402246,147.402076953108,341.096923029164,55.9211322292055,55.2939305987521,679.260309799644,472.910296424867,677.290183291557,488.203812414715,30.7070810779887,47.5800626931372,15.2041766056566,15.4703644971126,18.4115129277838,36.1551197533635,20.2801578834697,38.9026369908208,257.149208251062,318.177952867996,228.329413636824,3.6433724029557,9.19608417733892,6.66229880279792,13.8648432408858,13.6072998302656,14.9893052733274,25.4868690802462,49.671047181891,3.01795190105979,3.21480336285293,4.39877810409872,10.9597866213787,8.61946472599353,13.2335823278423,26.7516777330327,6.96619933864726,487.335951995385,613.260062654366,363.160952227567,6.62802472113606,7.03578179943289,10.8037236876609,11.3637473080901,16.9217239302767,14.9639099500757,17.9051137457814,22.8032391189676,41.6852272250795,34.8866881816579,41.2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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:14964
|HGNC=
|MCL_coexpression_id=718
|TSSclassifier=NA
|UniProt=uniprot:E9QQ06,uniprot:P01899,uniprot:Q792Z7,uniprot:Q31151,uniprot:Q8R3Y0
|association_with_transcript=0bp_to_ENSMUST00000087173,NM_010380,uc008chf.1,uc008chg.1_5end
|cluster_id=chr17:35400032..35400045,+
|description=CAGE_peak_1_at_H2-D1_5end
|id=chr17:35400032..35400045,+
|ontology_enrichment_celltype=CL:0000063!3.00e-14!66;CL:0000219!4.71e-12!54;CL:0002320!6.86e-11!46;CL:0000134!6.86e-11!46;CL:0000144!3.95e-10!121;CL:0000012!3.95e-10!121;CL:0000988!2.06e-09!32;CL:0002032!2.06e-09!32;CL:0000037!2.06e-09!32;CL:0000566!2.06e-09!32;CL:0000837!2.06e-09!32;CL:0002371!5.14e-09!118;CL:0002031!3.51e-08!25;CL:0000548!7.30e-08!115;CL:0000004!7.30e-08!115;CL:0000255!7.30e-08!115;CL:0000738!1.50e-07!17;CL:0002087!1.50e-07!17;CL:0000838!9.40e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000219,4.71e-12,54;CL:0002320,6.86e-11,46;CL:0000134,6.86e-11,46;CL:0000988,2.06e-09,32;CL:0002032,2.06e-09,32;CL:0000037,2.06e-09,32;CL:0000837,2.06e-09,32;CL:0002031,3.51e-08,25;CL:0000738,1.50e-07,17;CL:0002087,1.50e-07,17;CL:0000838,9.40e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!2.20e-12!70;UBERON:0004119!4.82e-12!130;UBERON:0000925!4.82e-12!130;UBERON:0006595!4.82e-12!130;UBERON:0001007!1.74e-11!128;UBERON:0001555!1.74e-11!128;UBERON:0007026!1.74e-11!128;UBERON:0002193!5.90e-11!48;UBERON:0002384!6.86e-11!46;UBERON:0004921!1.11e-10!126;UBERON:0004185!1.11e-10!126;UBERON:0002390!1.10e-09!45;UBERON:0003061!1.10e-09!45;UBERON:0002371!2.02e-08!16;UBERON:0004923!2.90e-08!24;UBERON:0000344!1.26e-07!15;UBERON:0003929!2.23e-07!55;UBERON:0005911!9.67e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.18e-12,118;UBERON:0000925,1.18e-12,118;UBERON:0006595,1.18e-12,118;UBERON:0001007,4.38e-12,116;UBERON:0001555,4.38e-12,116;UBERON:0007026,4.38e-12,116;UBERON:0004921,2.95e-11,114;UBERON:0002193,5.90e-11,48;UBERON:0002405,5.90e-11,48;UBERON:0002384,6.86e-11,46;UBERON:0002390,1.10e-09,45;UBERON:0003061,1.10e-09,45;UBERON:0002371,2.02e-08,16;UBERON:0004923,2.90e-08,24;UBERON:0000344,1.26e-07,15;UBERON:0003929,2.23e-07,55;UBERON:0000160,9.46e-07,31;UBERON:0005911,9.67e-07,69
|phase1_expression=2.88267924788629,2896.84485881434,2772.76536483983,1486.00667015046,2347.19739052858,675.042552357709,591.740818628467,1601.38745732243,1842.92437296532,2093.47312342391,440.886268180675,406.518922240234,1177.51862046683,1468.92502184641,334.10909110111,328.009933171518,233.653667294801,953.484394795273,821.315457298375,905.647516936996,238.036169132844,255.177744586275,314.484546123278,715.486114732115,1015.82429656543,2241.22735594092,1716.58655469391,1550.53099040766,1344.79573949276,1509.40844713223,1462.9779093037,24.7661962649256,42.4394703433353,0,140.381887199119,167.398287876002,152.718678484252,1757.83284909501,1355.61682274879,1138.14061939904,2650.57108506775,2170.03550571298,1699.77174596207,15.8629990649227,16.3216859263418,4.77221555620372,701.022644535843,109.666653659365,312.393751848419,282.506643354934,239.936726665871,64.6886539642372,971.125723862178,1378.91343196357,1094.32141000786,129.401496326081,201.719541716885,530.110910861211,39.4517098676216,30.6814767977779,29.7900759647904,185.347959041815,124.50127145556,5497.03742301343,4424.18810612464,5639.0806723272,757.089479280009,629.733802422028,15.0349937847293,20.9259204414121,13.2504725651371,64.2714714908558,98.5073692644196,13.5964787128599,14.3768206527355,12.8690630125403,74.8787990795843,78.4000255843053,43.6242554447731,32.4440267816277,59.7414312723735,27.0874952689515,98.8307816464889,93.9813558752905,148.367098591283,39.7748590389451,46.1284245789094,67.8493982804094,232.630865919541,260.94859704873,616.541767468469,1009.27720769917,1849.52202768508,521.892986313769,399.612496730316,355.733348355284,202.80174267025,4.60161870960756,5.71529210126311,4.94675404314476,16.6195235336483,75.7126216744475,84.0857291031931,63.9960032837998,178.821599875263,182.419103142071,190.077191325559,411.061966988616,518.393643061638,357.893997285293,13.8788261412909,15.8322048722313,27.443244173471,36.324156373182,46.3299506114677,171.157897391018,209.374137671015,316.672591654606,301.652198214907,61.3096361300681,160.330942402246,147.402076953108,341.096923029164,55.9211322292055,55.2939305987521,679.260309799644,472.910296424867,677.290183291557,488.203812414715,30.7070810779887,47.5800626931372,15.2041766056566,15.4703644971126,18.4115129277838,36.1551197533635,20.2801578834697,38.9026369908208,257.149208251062,318.177952867996,228.329413636824,3.6433724029557,9.19608417733892,6.66229880279792,13.8648432408858,13.6072998302656,14.9893052733274,25.4868690802462,49.671047181891,3.01795190105979,3.21480336285293,4.39877810409872,10.9597866213787,8.61946472599353,13.2335823278423,26.7516777330327,6.96619933864726,487.335951995385,613.260062654366,363.160952227567,6.62802472113606,7.03578179943289,10.8037236876609,11.3637473080901,16.9217239302767,14.9639099500757,17.9051137457814,22.8032391189676,41.6852272250795,34.8866881816579,41.2060334838529,62.3419145407631,76.4625934234488,159.173833586012,202.383279490641,14.7202963994889,12.9659811597898,1265.50393882795,527.049979360444,7.46508876873319,7.66381017139447,22.1652033474001,40.3367049246685,82.0574981787571,145.332378349995,376.776074866342,363.161195166444,332.265146033956,350.561303736508,297.125268769539,351.438388783801,373.918826283221,367.017366607799,6.63837653335786,11.4248512609729,5.63538678365402,14.6628956048626,20.752916126936,35.8394039639528,47.3641663060687,89.7469699715981,89.1752774139009,129.196830626125,520.570813165033,15.3497497258807,21.4249304673391,25.8591429242582,29.0089973585559,42.9295344359302,56.7815649472566,85.4457528228908,119.980067813526,120.532460389568,125.078339678798,346.463222279377,224.979162315598,303.599811292428,319.865588309569,458.803788816562,603.588672274297,9.47457058852424,11.5705133273838,15.4468028055421,21.1221223459652,32.6637202011541,84.2674488736489,150.838309794078,95.6845324724579,174.071246063937,144.625475172341,392.124912114761,423.941630480774,520.158014659116,2088.45928255892,1694.8101107791,417.016103520143,388.794875543368,44.9541651965817,42.7822656061542,55.4100115373163,134.062062345522,56.4759712755099,58.9562503887924,42.4384093533614,44.6871652171272,44.5597348164788,40.1968673720142,57.8879303395099,59.3279391559963,43.8769433520641,28.5975971615408,117.24251038203,30.9834150381024,29.4825396429973,269.726151060096,152.656909090957,13.8384962608339,32.3486205952284,36.4007803928883,42.8187744677121,67.635732547664,131.798429515793,86.8845613451238,68.0909992714818,89.4384024958359,184.482565006248,200.082953901482,135.835402695761,6.48219938512717,11.5129228566652,14.3605813471167,7.80297028026004,14.8046118609719,19.087686389846,47.8009970109921,295.686352160275,420.698492735547,180.833286405069,309.161724265275,44.8871106214617,57.2972786817481,94.4235241064809,88.6360858623331,306.637840134603,46.7271761066484,429.056781683408,65.837410880268,90.0045403016799,120.555812483002,238.66812160091,354.60616847011,813.346787520598,851.884490294106,850.759038740033,266.353102426217,6.01038387804157,21.7551829825728,36.5058051977688,51.0175442275304,54.5906409365444,83.8856234513585,128.030202918545,221.445526918489,448.727037536187,411.326625263545,3.94585057078933,3.13984746692355,5.46013018508422,7.00024278038572,10.8494251721294,9.96841140395591,17.2515140809258,24.2180155809747,15.938620352708,25.3663326867306,41.7643509073905,192.134761341932,56.763060281246,64.7079030138412,73.535185805432,65.3447439186307,75.8962775264432,163.586006796678,118.74237984836,112.981457491977,98.4591941982598,118.672419906061,168.212302156813,184.05325305795,174.263461152719,136.491690936357,69.4816034060822,52.9311753995907,110.971731416656,294.227751711026,755.79732864191,352.750028338753,202.149381471559,298.435401901041,13.5540442228096,11.0478056761722,13.7494923225455,18.2164373284309,9.59115527678899,9.06472676867641,13.5004500046361,14.4102785031751,10.4222754066367,19.1571315348173,2.38710899443606,8.37952234142165,8.36594668195257,19.4485373654635,6.49800804146745,9.92754945630076,24.6693867859793,32.7595741009842,29.2036480728552,33.1033347410575,29.1501194873776,28.6712038906836,33.7109426891577,30.7960983067421,30.4982340154306,29.5302088595506,40.2118611028649,43.790393045261,40.7965041795274,32.5309613497018,34.2869252385415,37.6248709057795,33.8579389725196,27.1797799102454,30.3973298741518,29.5304981541951,32.5611791713535,30.7791562382276,31.0991420707023,31.4239672128334,32.5059949660237,38.0227301969675,37.2400249284417,33.0015471726108,32.2154040338506,26.2301106834843,46.5523900806363,66.6100267549725,52.6042913189319,115.589903618626,78.6031962753229
|short_description=p1@H2-D1
}}

Revision as of 19:29, 4 August 2015

Short description:p1@H2-D1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_H2-D1_5end
Coexpression cluster:MCL_coexpression_mm9:718
Association with transcript: 0bp_to_ENSMUST00000087173, NM_010380, uc008chf.1, uc008chg.1_5end
EntrezGene:14964
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@H2-D1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52896.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62772.77
CD326+ enterocyte, pool1.CNhs13542.11848-124I31486.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I42347.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7675.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8591.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91601.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71842.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22093.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6440.89
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1406.52
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41177.52
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81468.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1334.11
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3328.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5233.65
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2953.48
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4821.32
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6905.65
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3238.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2255.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9314.48
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1715.49
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21015.82
GP2+ M cell, pool1.CNhs13228.11845-124H92241.23
GP2+ M cell, pool2.CNhs13231.11846-124I11716.59
GP2+ M cell, pool3.CNhs13240.11847-124I21550.53
Ileum epithelium, pool1.CNhs13199.10252-104B91344.80
Ileum epithelium, pool2.CNhs13232.10253-104C11509.41
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81462.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G642.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5140.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6167.40
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7152.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81757.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11355.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31138.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92650.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22170.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41699.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7701.02
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2109.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8312.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3282.51
Mouse Astrocytes, donor2.CNhs12078.11552-120C4239.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C464.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2971.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91378.91
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11094.32
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1129.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1201.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5530.11
Mouse Granule cells, donor1.CNhs12131.11713-123C339.45
Mouse Granule cells, donor2.CNhs12357.11731-123E330.68
Mouse Granule cells, donor3.CNhs12108.11636-122C729.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6185.35
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1124.50
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75497.04
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74424.19
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25639.08
Mouse Microglia, donor1.CNhs12629.11718-123C8757.09
Mouse Microglia, donor2.CNhs12634.11736-123E8629.73
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.93
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F164.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D598.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.60
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D374.88
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F378.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.62
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D432.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F459.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D827.09
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E498.83
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E593.98
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6148.37
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F646.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E167.85
Mouse Schwann, donor1.CNhs12507.11728-123D9232.63
Mouse Schwann, donor2.CNhs12573.11746-123F9260.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3616.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71009.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C41849.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C8521.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F4399.61
Mouse hepatocyte, donor8.CNhs13091.11824-124F6355.73
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7202.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H175.71
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I884.09
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1178.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2182.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3190.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6411.06
accessory axillary lymph node, adult.CNhs10475.1063-29H9518.39
adrenal gland, adult.CNhs10508.49-24D7357.89
adrenal gland, embryo E14.CNhs11038.406-44C513.88
adrenal gland, embryo E16.CNhs11004.1254-43D615.83
adrenal gland, embryo E17.CNhs11043.1263-45I127.44
adrenal gland, embryo E18.CNhs11026.1262-18F536.32
adrenal gland, neonate N00.CNhs11191.1311-23C146.33
adrenal gland, neonate N25.CNhs11223.1377-27I3171.16
amnion, adult pregnant day17.5.CNhs10488.583-22A8209.37
aorta, adult.CNhs10498.46-23H1316.67
bone (os femoris), adult.CNhs10483.56-12G2301.65
bone (os femoris), neonate N02.CNhs11227.1985-43F561.31
bone (os femoris), neonate N16.CNhs11225.1525-43A6160.33
bone (os femoris), neonate N20.CNhs11195.1350-25C3147.40
cecum, adult.CNhs10467.37-13H4341.10
cerebellum, adult.CNhs10494.15-8B255.92
cerebellum, neonate N30.CNhs11135.1395-42I255.29
colon, adult.CNhs10468.36-18H7679.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7472.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1677.29
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4488.20
corpora quadrigemina, adult.CNhs10501.16-22A430.71
corpus striatum, adult.CNhs10487.19-21D847.58
corpus striatum, neonate N00.CNhs11226.630-43F115.20
cortex, adult.CNhs10473.12-14D515.47
cortex, neonate N30.CNhs11107.1392-42F218.41
diencephalon, adult.CNhs10482.20-12F236.16
diencephalon, neonate N30.CNhs11201.1388-42B220.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B138.90
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2257.15
epididymis, adult.CNhs10490.58-23B2318.18
eyeball, adult.CNhs10484.31-12G4228.33
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D413.86
eyeball, neonate N00.CNhs11207.633-15C613.61
eyeball, neonate N01.CNhs11140.1532-43E714.99
eyeball, neonate N02.CNhs11205.1551-44G825.49
eyeball, neonate N16.CNhs11188.777-19A249.67
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A810.96
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C413.23
forelimb, embryo E18.CNhs11008.1520-43B526.75
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8487.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2613.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5363.16
heart, embryo E11.CNhs10586.331-24E96.63
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I910.80
heart, embryo E14.CNhs10597.403-26D411.36
heart, embryo E15.CNhs11017.431-16C816.92
heart, embryo E16.CNhs11021.457-17C614.96
heart, embryo E17.CNhs11025.479-18E517.91
heart, embryo E18.CNhs11030.1283-20G322.80
heart, neonate N00.CNhs11213.639-21E341.69
heart, neonate N03.CNhs11221.1349-25I234.89
heart, neonate N10.CNhs11118.749-24G141.21
heart, neonate N16.CNhs11209.782-15G162.34
heart, neonate N20.CNhs11127.821-26I676.46
heart, neonate N25.CNhs11196.1351-25D3159.17
heart, neonate N30.CNhs11202.1390-42D2202.38
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G112.97
intestinal mucosa, adult.CNhs10506.860-29I31265.50
intestine, adult.CNhs10496.178-9A3527.05
intestine, embryo E12.CNhs11019.1251-16I57.47
intestine, embryo E13.CNhs11010.381-16D57.66
intestine, embryo E15.CNhs10602.976-16D822.17
intestine, embryo E16.CNhs10585.463-22H440.34
intestine, embryo E17.CNhs10582.482-18D382.06
intestine, embryo E18.CNhs10526.1289-20F7145.33
intestine, neonate N00.CNhs11126.644-26D1376.78
intestine, neonate N01.CNhs11192.1322-23E9363.16
intestine, neonate N06.CNhs11102.688-20B8332.27
intestine, neonate N07.CNhs11095.720-20F2350.56
intestine, neonate N10.CNhs11098.755-23A5297.13
intestine, neonate N20.CNhs11187.827-18D1351.44
intestine, neonate N25.CNhs11121.1352-25E3373.92
intestine, neonate N30.CNhs11131.1384-42G1367.02
kidney, embryo E14.CNhs10606.411-4I96.64
kidney, embryo E15.CNhs10997.434-16F811.42
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I214.66
kidney, embryo E18.CNhs11001.1288-20C720.75
kidney, neonate N00.CNhs11214.646-21G735.84
kidney, neonate N10.CNhs11206.758-6D547.36
kidney, neonate N20.CNhs11113.832-19I189.75
kidney, neonate N25.CNhs11122.1353-25F389.18
kidney, neonate N30.CNhs11203.1385-42H1129.20
liver, adult pregnant day01.CNhs10466.508-5B2520.57
liver, embryo E12.CNhs10601.355-15F815.35
liver, embryo E13.CNhs10524.378-3H621.42
liver, embryo E14.CNhs10594.409-16E125.86
liver, embryo E15.CNhs10520.433-16D729.01
liver, embryo E16.CNhs10523.462-17F542.93
liver, embryo E17.CNhs10510.481-18A356.78
liver, embryo E18.CNhs10579.499-43G485.45
liver, neonate N00.CNhs11117.641-24F4119.98
liver, neonate N03.CNhs11123.1345-25G2120.53
liver, neonate N06.CNhs11101.684-20A8125.08
liver, neonate N07.CNhs11103.716-20H2346.46
liver, neonate N10.CNhs11115.751-24B9224.98
liver, neonate N20.CNhs11220.823-25A3303.60
liver, neonate N25.CNhs11198.1368-26H1319.87
liver, neonate N30.CNhs11106.1382-42D1458.80
lung, adult.CNhs10474.28-22B1603.59
lung, embryo E12.CNhs10522.354-16G29.47
lung, embryo E14.CNhs10604.404-26F811.57
lung, embryo E15.CNhs11020.432-17C515.45
lung, embryo E16.CNhs10998.458-17B621.12
lung, embryo E17.CNhs10605.480-44A632.66
lung, embryo E18.CNhs10583.1287-20I684.27
lung, neonate N00.CNhs11224.640-42C6150.84
lung, neonate N06.CNhs11212.683-20E595.68
lung, neonate N07.CNhs11111.715-19A3174.07
lung, neonate N10.CNhs11219.750-23E6144.63
lung, neonate N20.CNhs11109.822-18A4392.12
lung, neonate N25.CNhs11119.1359-25C7423.94
lung, neonate N30.CNhs11133.1394-42H2520.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A12088.46
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11694.81
mammary gland, adult lactating day02.CNhs10480.595-22B6417.02
mammary gland, adult pregnant day19.CNhs10476.588-5H2388.79
medulla oblongata, adult.CNhs10477.17-12C244.95
medulla oblongata, neonate N30.CNhs11200.1396-42A342.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C755.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2134.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E156.48
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E258.96
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E342.44
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D744.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D844.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D940.20
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D457.89
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D559.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D643.88
olfactory brain, adult.CNhs10489.18-22I928.60
ovary, adult.CNhs10507.91-2I7117.24
ovary, embryo E18.CNhs11040.505-44H730.98
ovary, neonate N00.CNhs11217.1299-22I429.48
oviduct, adult pregnant day01.CNhs10500.988-6G6269.73
pancreas, adult.CNhs10486.34-16E4152.66
pancreas, embryo E14.CNhs11012.405-44F413.84
pancreas, embryo E15.CNhs11042.1556-45F232.35
pancreas, embryo E16.CNhs11003.460-26E536.40
pancreas, embryo E17.CNhs10599.1558-45G342.82
pancreas, embryo E18.CNhs10580.1535-43I767.64
pancreas, neonate N00.CNhs11105.645-26G9131.80
pancreas, neonate N01.CNhs11138.1531-43D786.88
pancreas, neonate N02.CNhs11139.1539-43D868.09
pancreas, neonate N16.CNhs11136.787-43B689.44
pancreas, neonate N25.CNhs11094.1555-45E2184.48
pancreas, neonate N30.CNhs11182.1548-44H5200.08
pituitary gland, adult.CNhs10493.21-1G8135.84
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C711.51
pituitary gland, embryo E14.CNhs11037.398-44A514.36
pituitary gland, embryo E15.CNhs10592.427-16B97.80
pituitary gland, embryo E16.CNhs11036.449-43F614.80
pituitary gland, embryo E17.CNhs11039.1265-44F519.09
pituitary gland, neonate N00.CNhs11190.1308-22E947.80
placenta, adult pregnant day10.CNhs10472.539-13I7295.69
placenta, adult pregnant day17.CNhs10464.577-18G3420.70
prostate, adult.CNhs10470.859-1F8180.83
skin, adult.CNhs10492.30-1C3309.16
skin, neonate N00.CNhs11124.650-25G444.89
skin, neonate N03.CNhs11215.662-22H357.30
skin, neonate N06.CNhs11097.693-20I594.42
skin, neonate N10.CNhs11108.762-6C488.64
small intestine, neonate N16.CNhs11114.790-21I1306.64
spinal cord, adult.CNhs10505.24-13C946.73
spleen, adult.CNhs10465.25-2G2429.06
spleen, embryo E16.CNhs11035.461-43C165.84
spleen, embryo E18.CNhs11011.1271-21F290.00
spleen, neonate N10.CNhs11116.752-24D1120.56
spleen, neonate N20.CNhs11112.824-19H1238.67
spleen, neonate N25.CNhs11099.1354-25G3354.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6813.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9851.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3850.76
stomach, adult.CNhs10503.33-1H6266.35
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G821.76
stomach, embryo E16.CNhs11022.459-17D436.51
stomach, embryo E17.CNhs11006.1035-18D551.02
stomach, embryo E18.CNhs10999.1286-20C654.59
stomach, neonate N03.CNhs11193.1340-24B883.89
stomach, neonate N07.CNhs11210.718-18A9128.03
stomach, neonate N25.CNhs11104.1355-25E4221.45
stomach, neonate N30.CNhs11134.1386-42I1448.73
submandibular gland, adult.CNhs10469.59-29C1411.33
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I510.85
testis, embryo E18.CNhs11027.503-18G59.97
testis, neonate N00.CNhs11189.1300-22B717.25
testis, neonate N07.CNhs11222.726-26I424.22
testis, neonate N10.CNhs11204.763-44D915.94
testis, neonate N20.CNhs11110.839-18H325.37
testis, neonate N30.CNhs11130.1391-42E241.76
thymus, adult.CNhs10471.38-12B5192.13
thymus, embryo E14.CNhs11041.402-44I456.76
thymus, embryo E15.CNhs11005.430-45I264.71
thymus, embryo E16.CNhs11002.456-26C573.54
thymus, embryo E17.CNhs10581.478-18C165.34
thymus, embryo E18.CNhs10595.1273-19G475.90
thymus, neonate N02.CNhs11181.1541-43F8163.59
thymus, neonate N03.CNhs11137.2104-43C7118.74
thymus, neonate N06.CNhs11197.681-26C4112.98
thymus, neonate N07.CNhs11211.713-19D398.46
thymus, neonate N10.CNhs11194.748-24E4118.67
thymus, neonate N20.CNhs11186.820-7A2168.21
thymus, neonate N25.CNhs11125.1362-25G7184.05
thymus, neonate N30.CNhs11132.1393-42G2174.26
tongue, adult.CNhs10499.32-1B4136.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H369.48
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F752.93
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5110.97
urinary bladder, adult.CNhs10481.879-12E4294.23
uterus, adult pregnant day19.CNhs10497.590-15F5755.80
uterus, adult.CNhs10509.92-27E5352.75
vagina, adult.CNhs10502.89-27D5202.15
vesicular gland, adult.CNhs10491.51-27F8298.44
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H28.37
whole body, embryo E14.5.CNhs10578.420-27D219.45
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F29.93
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G532.76
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G533.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G533.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G540.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G543.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G540.80
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G537.62
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G533.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G527.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G530.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G532.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G531.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G531.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G538.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G537.24
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.00
whole body, embryo E17.5.CNhs10513.490-9F932.22
whole body, embryo E17.CNhs10517.475-3I526.23
whole body, embryo E18.CNhs10516.493-3B346.55
whole body, neonate N00.CNhs10525.657-19C266.61
whole body, neonate N01.CNhs10576.659-23C652.60
whole body, neonate N06.CNhs10515.692-21D1115.59
whole body, neonate N10.CNhs10518.761-6B478.60





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.18e-12118
endoderm1.18e-12118
presumptive endoderm1.18e-12118
digestive system4.38e-12116
digestive tract4.38e-12116
primitive gut4.38e-12116
subdivision of digestive tract2.95e-11114
hemolymphoid system5.90e-1148
immune system5.90e-1148
connective tissue6.86e-1146
hematopoietic system1.10e-0945
blood island1.10e-0945
bone marrow2.02e-0816
organ component layer2.90e-0824
mucosa1.26e-0715
gut epithelium2.23e-0755
intestine9.46e-0731
endo-epithelium9.67e-0769
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