FFCP PHASE1:Mm9::chr1:135937037..135937057,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1423|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:135937037..135937057,+|id=chr1:135937037..135937057,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,4.84e-11,8;CL:0000333,1.49e-08,10;CL:0000095,1.49e-08,10;CL:0000243,1.49e-08,10;CL:0000123,1.49e-08,10;CL:0000125,1.49e-08,10;CL:0000030,1.49e-08,10;CL:0000339,1.49e-08,10;CL:0000128,6.13e-08,6;CL:0000126,6.13e-08,6;CL:0000127,6.13e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!2.61e-09!23;UBERON:0000026!6.06e-08!13;UBERON:0004708!6.06e-08!13;UBERON:0002101!6.06e-08!13;UBERON:0004357!6.06e-08!13;UBERON:0009872!6.06e-08!13;UBERON:0004347!6.06e-08!13;UBERON:0005732!6.06e-08!13;UBERON:0005733!6.06e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000026,3.00e-13,12;UBERON:0004708,3.00e-13,12;UBERON:0002101,3.00e-13,12;UBERON:0004357,3.00e-13,12;UBERON:0004347,3.00e-13,12;UBERON:0005732,3.00e-13,12;UBERON:0005733,3.00e-13,12;UBERON:0010707,4.81e-12,13;UBERON:0005418,1.33e-09,5;UBERON:0002472,1.33e-09,5;UBERON:0008784,1.33e-09,5;UBERON:0006058,1.33e-09,5;UBERON:0004709,1.33e-09,5;UBERON:0002529,1.33e-09,5;UBERON:0010538,1.33e-09,5;UBERON:0005420,1.33e-09,5;UBERON:0010758,1.33e-09,5;UBERON:0000978,1.33e-09,5;UBERON:0002103,1.33e-09,5;UBERON:0000376,1.33e-09,5;UBERON:0000154,1.33e-09,5;UBERON:0010709,1.33e-09,5;UBERON:0005730,1.33e-09,5;UBERON:0000981,5.64e-08,4;UBERON:0003608,5.64e-08,4;UBERON:0003826,5.64e-08,4;UBERON:0008202,5.64e-08,4;UBERON:0004381,5.64e-08,4;UBERON:0007273,5.64e-08,4;UBERON:0010912,5.64e-08,4;UBERON:0002513,5.64e-08,4;UBERON:0004375,5.64e-08,4;UBERON:0010740,5.64e-08,4;UBERON:0010363,5.64e-08,4;UBERON:0003860,5.64e-08,4;UBERON:0002428,5.64e-08,4;UBERON:0010742,5.64e-08,4;UBERON:0002495,5.64e-08,4;UBERON:0003464,5.64e-08,4;UBERON:0003606,5.64e-08,4;UBERON:0005893,5.64e-08,4;UBERON:0009749,5.64e-08,4;UBERON:0010712,5.64e-08,4;UBERON:0010886,5.64e-08,4;UBERON:0005254,5.64e-08,4;UBERON:0010885,5.64e-08,4;UBERON:0010881,5.64e-08,4;UBERON:0010882,5.64e-08,4;UBERON:0007844,5.64e-08,4;UBERON:0001441,5.64e-08,4;UBERON:0011249,5.64e-08,4;UBERON:0002091,5.64e-08,4;UBERON:0003285,5.64e-08,4;UBERON:0004288,5.64e-08,4;UBERON:0010129,5.64e-08,4;UBERON:0006234,5.64e-08,4;UBERON:0003102,1.77e-07,22;UBERON:0000947,1.98e-07,4;UBERON:0001637,1.98e-07,4;UBERON:0004573,1.98e-07,4;UBERON:0003509,1.98e-07,4;UBERON:0004571,1.98e-07,4;UBERON:0010191,1.98e-07,4;UBERON:0004572,1.98e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.43508680436368,9.7321853970734,1.28482726513177,9.38869613217647,2.8343270329458,23.9457939180574,23.1371579898397,0.699932108126813,2.87505128729943,0,0,0,0,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,4.49400165777607,7.30014780110954,0,0,0,0,0.441737081903227,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0.52091337055676,0,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,2.94933282276679,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0.445326417194474,0.693941307064543,0.608930956624282,0.691846491768175,0.150722640552623,1.52865319276416,0.125666591329675,0.494389935468748,2.89198713839823,3.5384422077995,10.676612096529,4.85851340612866,6.78825354389311,0,0,3.35114730901528,0.255457055208591,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.41557608911912,0,0.81471491080253,7.34001126599549,0.758168275301024,1.05220927943237,0.130120442962704,0,0.180062129805349,0.452114453507145,1.42876648217788,0.896796041993948,1.49922759295566,2.58703370739016,0.431135985865684,0.567318240503458,2.28736461413134,4.82230611340665,2.22437799380478,1.39300866608867,4.52720700097476,0.398068533636986,0,0,0,0,1.17263029990548,0.540186184383045,0.473489471170421,0.787056926989615,0.308534225774757,0,0,0.350296027101508,0.329119699826961,0.492502392237286,0.648550476366846,0.438599962275997,0.658650345873152,0.536825675041487,0,0.205809224758569,0,0,0,0.232236671860439,0.257734922644187,0.605050573870028,0,0,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.561086559122548,0.442655759869801,0.147610147979602,0.31399745568275,0.246794327843601,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0.50925170356284,0.575392274901621,1.78348749452539,0.549122826376163,0,0.372140947668503,0.936113019343682,0.505157755894224,0.179397413521912,0,0.739012760666419,0.757965647081939,1.14075483509418,1.01847051465113,0.469380496577004,1.00503754465089,0.476087281772027,0.780534591431195,0.472905432318573,0.221464689648775,0.478364305972461,0.163863314715738,0.345369963731791,0,0,0,0.983528546038072,1.37968373152366,0,0,0,7.06918596172244,0.315508219416257,0,0.861693590931196,0,0.668396022247182,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0.141940085208269,1.24645922567079,2.11753047159649,0.494910368917606,3.98235415019888,0.242780636154981,0,0.188605079755898,0,0,0,1.45413491791002,0.712994756769443,0,0,2.06271086496374,0,0.36012218806262,0.388076051348264,0.428674070063185,0.886701168211368,1.60531935841864,0.987294123612726,0.913394847343798,0,1.27099242518292,1.7642271844397,0.32977250588296,0.645857706783622,0.603129249281559,0.716234064018819,0.492422699235184,0.291480836629851,0.556275906031529,0.512612642393558,1.03193433981611,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,0,0,0,0.954670618015114,0.474503990371703,0,0,0,0.218362563746178,0.134864346384821,0.991841468704031,0,0,0.621339313086926,0,0.299033092087958,0.496375471371293,0.388902376688095,0.258319646955462,0,0.234714477291508,0.2604087696879,1.67774951081137,0.483168241652012,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0.214368379079066,2.50786052017682,0,0,0,0.171853182343688,0,0,0,0,0,0,0,1.59609949360412,0.170733605754134,1.45864030240976,0.209613162627982,0.183843508450014,1.11123363900808,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.468207537349412,0.448176066834085,0.229741875822453,0,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.188218760830661,0.592302255241736,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,2.3148793317737,3.99696924700713,2.57324769289949,6.01638951335235,29.267114806533,17.6473135295612,11.5933917810211|short_description=p@chr1:135937037..135937057,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1423 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:135937037..135937057,+ | |||
|description=CAGE_peak_at_chr1:135937037..135937057,+ | |||
|id=chr1:135937037..135937057,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.84e-11,8;CL:0000333,1.49e-08,10;CL:0000095,1.49e-08,10;CL:0000243,1.49e-08,10;CL:0000123,1.49e-08,10;CL:0000125,1.49e-08,10;CL:0000030,1.49e-08,10;CL:0000339,1.49e-08,10;CL:0000128,6.13e-08,6;CL:0000126,6.13e-08,6;CL:0000127,6.13e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.61e-09!23;UBERON:0000026!6.06e-08!13;UBERON:0004708!6.06e-08!13;UBERON:0002101!6.06e-08!13;UBERON:0004357!6.06e-08!13;UBERON:0009872!6.06e-08!13;UBERON:0004347!6.06e-08!13;UBERON:0005732!6.06e-08!13;UBERON:0005733!6.06e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,3.00e-13,12;UBERON:0004708,3.00e-13,12;UBERON:0002101,3.00e-13,12;UBERON:0004357,3.00e-13,12;UBERON:0004347,3.00e-13,12;UBERON:0005732,3.00e-13,12;UBERON:0005733,3.00e-13,12;UBERON:0010707,4.81e-12,13;UBERON:0005418,1.33e-09,5;UBERON:0002472,1.33e-09,5;UBERON:0008784,1.33e-09,5;UBERON:0006058,1.33e-09,5;UBERON:0004709,1.33e-09,5;UBERON:0002529,1.33e-09,5;UBERON:0010538,1.33e-09,5;UBERON:0005420,1.33e-09,5;UBERON:0010758,1.33e-09,5;UBERON:0000978,1.33e-09,5;UBERON:0002103,1.33e-09,5;UBERON:0000376,1.33e-09,5;UBERON:0000154,1.33e-09,5;UBERON:0010709,1.33e-09,5;UBERON:0005730,1.33e-09,5;UBERON:0000981,5.64e-08,4;UBERON:0003608,5.64e-08,4;UBERON:0003826,5.64e-08,4;UBERON:0008202,5.64e-08,4;UBERON:0004381,5.64e-08,4;UBERON:0007273,5.64e-08,4;UBERON:0010912,5.64e-08,4;UBERON:0002513,5.64e-08,4;UBERON:0004375,5.64e-08,4;UBERON:0010740,5.64e-08,4;UBERON:0010363,5.64e-08,4;UBERON:0003860,5.64e-08,4;UBERON:0002428,5.64e-08,4;UBERON:0010742,5.64e-08,4;UBERON:0002495,5.64e-08,4;UBERON:0003464,5.64e-08,4;UBERON:0003606,5.64e-08,4;UBERON:0005893,5.64e-08,4;UBERON:0009749,5.64e-08,4;UBERON:0010712,5.64e-08,4;UBERON:0010886,5.64e-08,4;UBERON:0005254,5.64e-08,4;UBERON:0010885,5.64e-08,4;UBERON:0010881,5.64e-08,4;UBERON:0010882,5.64e-08,4;UBERON:0007844,5.64e-08,4;UBERON:0001441,5.64e-08,4;UBERON:0011249,5.64e-08,4;UBERON:0002091,5.64e-08,4;UBERON:0003285,5.64e-08,4;UBERON:0004288,5.64e-08,4;UBERON:0010129,5.64e-08,4;UBERON:0006234,5.64e-08,4;UBERON:0003102,1.77e-07,22;UBERON:0000947,1.98e-07,4;UBERON:0001637,1.98e-07,4;UBERON:0004573,1.98e-07,4;UBERON:0003509,1.98e-07,4;UBERON:0004571,1.98e-07,4;UBERON:0010191,1.98e-07,4;UBERON:0004572,1.98e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.43508680436368,9.7321853970734,1.28482726513177,9.38869613217647,2.8343270329458,23.9457939180574,23.1371579898397,0.699932108126813,2.87505128729943,0,0,0,0,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,4.49400165777607,7.30014780110954,0,0,0,0,0.441737081903227,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0.52091337055676,0,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,2.94933282276679,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0.445326417194474,0.693941307064543,0.608930956624282,0.691846491768175,0.150722640552623,1.52865319276416,0.125666591329675,0.494389935468748,2.89198713839823,3.5384422077995,10.676612096529,4.85851340612866,6.78825354389311,0,0,3.35114730901528,0.255457055208591,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.41557608911912,0,0.81471491080253,7.34001126599549,0.758168275301024,1.05220927943237,0.130120442962704,0,0.180062129805349,0.452114453507145,1.42876648217788,0.896796041993948,1.49922759295566,2.58703370739016,0.431135985865684,0.567318240503458,2.28736461413134,4.82230611340665,2.22437799380478,1.39300866608867,4.52720700097476,0.398068533636986,0,0,0,0,1.17263029990548,0.540186184383045,0.473489471170421,0.787056926989615,0.308534225774757,0,0,0.350296027101508,0.329119699826961,0.492502392237286,0.648550476366846,0.438599962275997,0.658650345873152,0.536825675041487,0,0.205809224758569,0,0,0,0.232236671860439,0.257734922644187,0.605050573870028,0,0,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.561086559122548,0.442655759869801,0.147610147979602,0.31399745568275,0.246794327843601,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0.50925170356284,0.575392274901621,1.78348749452539,0.549122826376163,0,0.372140947668503,0.936113019343682,0.505157755894224,0.179397413521912,0,0.739012760666419,0.757965647081939,1.14075483509418,1.01847051465113,0.469380496577004,1.00503754465089,0.476087281772027,0.780534591431195,0.472905432318573,0.221464689648775,0.478364305972461,0.163863314715738,0.345369963731791,0,0,0,0.983528546038072,1.37968373152366,0,0,0,7.06918596172244,0.315508219416257,0,0.861693590931196,0,0.668396022247182,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0.141940085208269,1.24645922567079,2.11753047159649,0.494910368917606,3.98235415019888,0.242780636154981,0,0.188605079755898,0,0,0,1.45413491791002,0.712994756769443,0,0,2.06271086496374,0,0.36012218806262,0.388076051348264,0.428674070063185,0.886701168211368,1.60531935841864,0.987294123612726,0.913394847343798,0,1.27099242518292,1.7642271844397,0.32977250588296,0.645857706783622,0.603129249281559,0.716234064018819,0.492422699235184,0.291480836629851,0.556275906031529,0.512612642393558,1.03193433981611,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,0,0,0,0.954670618015114,0.474503990371703,0,0,0,0.218362563746178,0.134864346384821,0.991841468704031,0,0,0.621339313086926,0,0.299033092087958,0.496375471371293,0.388902376688095,0.258319646955462,0,0.234714477291508,0.2604087696879,1.67774951081137,0.483168241652012,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0.214368379079066,2.50786052017682,0,0,0,0.171853182343688,0,0,0,0,0,0,0,1.59609949360412,0.170733605754134,1.45864030240976,0.209613162627982,0.183843508450014,1.11123363900808,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.468207537349412,0.448176066834085,0.229741875822453,0,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.188218760830661,0.592302255241736,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,2.3148793317737,3.99696924700713,2.57324769289949,6.01638951335235,29.267114806533,17.6473135295612,11.5933917810211 | |||
|short_description=p@chr1:135937037..135937057,+ | |||
}} |
Latest revision as of 19:56, 4 August 2015
Short description: | p@chr1:135937037..135937057, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135937037..135937057, + |
Coexpression cluster: | MCL_coexpression_mm9:1423 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.84e-11 | 8 |
migratory neural crest cell | 1.49e-08 | 10 |
neuron associated cell | 1.49e-08 | 10 |
glial cell (sensu Vertebrata) | 1.49e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.49e-08 | 10 |
glial cell | 1.49e-08 | 10 |
glioblast | 1.49e-08 | 10 |
glioblast (sensu Vertebrata) | 1.49e-08 | 10 |
oligodendrocyte | 6.13e-08 | 6 |
macroglial cell | 6.13e-08 | 6 |
astrocyte | 6.13e-08 | 6 |