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FFCP PHASE1:Mm9::chr6:116057579..116057595,-: Difference between revisions

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{{FFCP|EntrezGene=330401|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=0bp_to_ENSMUST00000173117_5end|description=CAGE_peak_8_at_Tmcc1_5end|id=chr6:116057579..116057595,-|ontology_enrichment_celltype=CL:0000540!6.87e-09!33;CL:0000047!6.87e-09!33;CL:0000031!6.87e-09!33;CL:0000404!6.87e-09!33;CL:0000117!3.62e-07!23;CL:0000337!3.62e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.99e-11,23;CL:0000337,1.99e-11,23;CL:0002609,3.19e-11,6;CL:0000540,4.13e-09,33;CL:0000047,4.13e-09,33;CL:0000031,4.13e-09,33;CL:0000404,4.13e-09,33;CL:0000393,4.22e-07,39;CL:0000211,4.22e-07,39;CL:0002613,9.16e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.14e-08!71;UBERON:0003075!2.14e-08!71;UBERON:0007284!2.14e-08!71;UBERON:0004121!2.60e-08!102;UBERON:0000924!2.60e-08!102;UBERON:0006601!2.60e-08!102|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.11e-17,92;UBERON:0003056,2.36e-14,49;UBERON:0002346,1.41e-11,64;UBERON:0003075,1.41e-11,64;UBERON:0007284,1.41e-11,64;UBERON:0004121,1.16e-09,95;UBERON:0000924,1.16e-09,95;UBERON:0006601,1.16e-09,95;UBERON:0010371,2.72e-09,73;UBERON:0002780,8.64e-09,39;UBERON:0001890,8.64e-09,39;UBERON:0006240,8.64e-09,39;UBERON:0001444,8.98e-09,11;UBERON:0000970,1.73e-08,9;UBERON:0000019,1.73e-08,9;UBERON:0000047,1.73e-08,9;UBERON:0010312,1.73e-08,9;UBERON:0004088,1.73e-08,9;UBERON:0002104,1.73e-08,9;UBERON:0001456,1.73e-08,9;UBERON:0003072,1.73e-08,9;UBERON:0004128,1.73e-08,9;UBERON:0003071,1.73e-08,9;UBERON:0003080,1.85e-08,40;UBERON:0000020,6.60e-08,12;UBERON:0001032,6.60e-08,12;UBERON:0004456,6.60e-08,12;UBERON:0000033,3.56e-07,13;UBERON:0002616,8.51e-07,46;UBERON:0001017,8.93e-07,73|phase1_expression=0.480446541314382,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.23706337375356,2.64495489636016,8.87363964908651,0,0,0,0,0,0,0,2.59224030771194,3.10513658162888,2.94454945891935,0.285650984403804,0.441737081903227,3.91970557487853,3.92966431174769,1.83843757322004,0,0.255374676170375,0.153606533256243,3.56092976871523,4.29991924931325,5.2091337055676,0,0,0,0.883885756421003,0.569486723196412,2.98239113320481,0.151452386666368,0.453429360640713,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0.506719730950197,1.01104889002957,0,0,0,1.04091196059682,1.21786191324856,0.691846491768175,1.05505848386836,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0,1.63350657746724,0.347648640384553,0,0.41557608911912,0.324482526135515,0.203678727700633,0.124406970610093,0,0,1.69156575851515,1.37941262660084,1.98068342785884,2.71268672104287,1.76894897793452,1.92170580427275,1.78033276663485,0.258703370739016,0.215567992932842,0.378212160335639,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,1.65700618028402,2.11073453982987,1.08037236876609,0.946978942340841,2.36117078096885,1.07986979021165,0.930135779001631,1.3413670069981,1.16765342367169,1.15191894939436,0.656669856316381,0.162137619091711,0.146199987425332,0.439100230582101,0,0,2.26390147234426,0,0,1.06644125267617,0.232236671860439,0.38660238396628,0.403367049246685,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0.685491075658373,0,0.203651327845314,0.581857461502877,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.488894929326078,0.509235257325564,0.469380496577004,0.670025029767263,0.476087281772027,0.585400943573396,1.41871629695572,0.8858587585951,0.797273843287435,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.94652465824877,0.390438744296638,1.07711698866399,0.477937595905104,0.891194696329576,0.566153061577665,0.404810701674894,1.16902343164525,0,0,0.283880170416537,0.534196811001766,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,1.02131881726136,1.8006109403131,1.68166288917581,0.643011105094777,1.24138163549592,1.24858172321449,1.15184314421485,0.608929898229199,0,0,0,0.16488625294148,0.484393280087717,0.301564624640779,0.119372344003136,0.164140899745061,0,0.927126510052548,0,0,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.216010681643603,0.627264888043406,1.31017538247707,1.07891477107857,0.330613822901344,0,0,0,0,0.598066184175915,0.165458490457098,0.583353565032143,0.129159823477731,0,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0.15241361331,0,0,0.288635524920988,0,1.81384306892169,0.221985953374065,0,0.335769232728157,0,0,0,0.643105137237198,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,2.38710899443606,2.79317411380722,2.21953687480374,0.729320151204882,0.838452650511929,0.735374033800057,0.666740183404846,1.03017528619447,0.962757628775446,1.01078884705519,1.77435509923168,0.754505365544305,0.936415074698824,0.960377286073039,0.516919220600519,0.952587382566147,0.811190281613988,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,1.12931256498397,0.25384382367503,0.73171189149109,0.263069711437843,1.08643291076689,0.561142271657738,0.593175090620871,0.689531376628944,0.409231043169689,0.154936841185966,0.385813221962283,1.49886346762768,1.16965804222704,0,0.382576664137687,0.220591419119515,0|short_description=p8@Tmcc1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:330401
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000173117_5end
|cluster_id=chr6:116057579..116057595,-
|description=CAGE_peak_8_at_Tmcc1_5end
|id=chr6:116057579..116057595,-
|ontology_enrichment_celltype=CL:0000540!6.87e-09!33;CL:0000047!6.87e-09!33;CL:0000031!6.87e-09!33;CL:0000404!6.87e-09!33;CL:0000117!3.62e-07!23;CL:0000337!3.62e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.99e-11,23;CL:0000337,1.99e-11,23;CL:0002609,3.19e-11,6;CL:0000540,4.13e-09,33;CL:0000047,4.13e-09,33;CL:0000031,4.13e-09,33;CL:0000404,4.13e-09,33;CL:0000393,4.22e-07,39;CL:0000211,4.22e-07,39;CL:0002613,9.16e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.14e-08!71;UBERON:0003075!2.14e-08!71;UBERON:0007284!2.14e-08!71;UBERON:0004121!2.60e-08!102;UBERON:0000924!2.60e-08!102;UBERON:0006601!2.60e-08!102
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.11e-17,92;UBERON:0003056,2.36e-14,49;UBERON:0002346,1.41e-11,64;UBERON:0003075,1.41e-11,64;UBERON:0007284,1.41e-11,64;UBERON:0004121,1.16e-09,95;UBERON:0000924,1.16e-09,95;UBERON:0006601,1.16e-09,95;UBERON:0010371,2.72e-09,73;UBERON:0002780,8.64e-09,39;UBERON:0001890,8.64e-09,39;UBERON:0006240,8.64e-09,39;UBERON:0001444,8.98e-09,11;UBERON:0000970,1.73e-08,9;UBERON:0000019,1.73e-08,9;UBERON:0000047,1.73e-08,9;UBERON:0010312,1.73e-08,9;UBERON:0004088,1.73e-08,9;UBERON:0002104,1.73e-08,9;UBERON:0001456,1.73e-08,9;UBERON:0003072,1.73e-08,9;UBERON:0004128,1.73e-08,9;UBERON:0003071,1.73e-08,9;UBERON:0003080,1.85e-08,40;UBERON:0000020,6.60e-08,12;UBERON:0001032,6.60e-08,12;UBERON:0004456,6.60e-08,12;UBERON:0000033,3.56e-07,13;UBERON:0002616,8.51e-07,46;UBERON:0001017,8.93e-07,73
|phase1_expression=0.480446541314382,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.23706337375356,2.64495489636016,8.87363964908651,0,0,0,0,0,0,0,2.59224030771194,3.10513658162888,2.94454945891935,0.285650984403804,0.441737081903227,3.91970557487853,3.92966431174769,1.83843757322004,0,0.255374676170375,0.153606533256243,3.56092976871523,4.29991924931325,5.2091337055676,0,0,0,0.883885756421003,0.569486723196412,2.98239113320481,0.151452386666368,0.453429360640713,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0.506719730950197,1.01104889002957,0,0,0,1.04091196059682,1.21786191324856,0.691846491768175,1.05505848386836,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0,1.63350657746724,0.347648640384553,0,0.41557608911912,0.324482526135515,0.203678727700633,0.124406970610093,0,0,1.69156575851515,1.37941262660084,1.98068342785884,2.71268672104287,1.76894897793452,1.92170580427275,1.78033276663485,0.258703370739016,0.215567992932842,0.378212160335639,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,1.65700618028402,2.11073453982987,1.08037236876609,0.946978942340841,2.36117078096885,1.07986979021165,0.930135779001631,1.3413670069981,1.16765342367169,1.15191894939436,0.656669856316381,0.162137619091711,0.146199987425332,0.439100230582101,0,0,2.26390147234426,0,0,1.06644125267617,0.232236671860439,0.38660238396628,0.403367049246685,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0.685491075658373,0,0.203651327845314,0.581857461502877,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.488894929326078,0.509235257325564,0.469380496577004,0.670025029767263,0.476087281772027,0.585400943573396,1.41871629695572,0.8858587585951,0.797273843287435,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.94652465824877,0.390438744296638,1.07711698866399,0.477937595905104,0.891194696329576,0.566153061577665,0.404810701674894,1.16902343164525,0,0,0.283880170416537,0.534196811001766,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,1.02131881726136,1.8006109403131,1.68166288917581,0.643011105094777,1.24138163549592,1.24858172321449,1.15184314421485,0.608929898229199,0,0,0,0.16488625294148,0.484393280087717,0.301564624640779,0.119372344003136,0.164140899745061,0,0.927126510052548,0,0,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.216010681643603,0.627264888043406,1.31017538247707,1.07891477107857,0.330613822901344,0,0,0,0,0.598066184175915,0.165458490457098,0.583353565032143,0.129159823477731,0,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0.15241361331,0,0,0.288635524920988,0,1.81384306892169,0.221985953374065,0,0.335769232728157,0,0,0,0.643105137237198,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,2.38710899443606,2.79317411380722,2.21953687480374,0.729320151204882,0.838452650511929,0.735374033800057,0.666740183404846,1.03017528619447,0.962757628775446,1.01078884705519,1.77435509923168,0.754505365544305,0.936415074698824,0.960377286073039,0.516919220600519,0.952587382566147,0.811190281613988,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,1.12931256498397,0.25384382367503,0.73171189149109,0.263069711437843,1.08643291076689,0.561142271657738,0.593175090620871,0.689531376628944,0.409231043169689,0.154936841185966,0.385813221962283,1.49886346762768,1.16965804222704,0,0.382576664137687,0.220591419119515,0
|short_description=p8@Tmcc1
}}

Revision as of 23:06, 4 August 2015

Short description:p8@Tmcc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Tmcc1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000173117_5end
EntrezGene:330401
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p8@Tmcc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest8.11e-1792
pre-chordal neural plate2.36e-1449
neurectoderm1.41e-1164
neural plate1.41e-1164
presumptive neural plate1.41e-1164
ectoderm-derived structure1.16e-0995
ectoderm1.16e-0995
presumptive ectoderm1.16e-0995
ecto-epithelium2.72e-0973
regional part of forebrain8.64e-0939
forebrain8.64e-0939
future forebrain8.64e-0939
subdivision of head8.98e-0911
eye1.73e-089
camera-type eye1.73e-089
simple eye1.73e-089
immature eye1.73e-089
ocular region1.73e-089
visual system1.73e-089
face1.73e-089
optic cup1.73e-089
optic vesicle1.73e-089
eye primordium1.73e-089
anterior neural tube1.85e-0840
sense organ6.60e-0812
sensory system6.60e-0812
entire sense organ system6.60e-0812
head3.56e-0713
regional part of brain8.51e-0746
central nervous system8.93e-0773
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