FFCP PHASE1:Mm9::chr15:101980792..101980807,+: Difference between revisions
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{{FFCP|EntrezGene=223920|HGNC=|MCL_coexpression_id=24|UniProt=O88908|association_with_transcript=-149bp_to_ENSMUST00000023806_5end|description=CAGE_peak_4_at_Soat2_5end|id=chr15:101980792..101980807,+|ontology_enrichment_celltype=CL:0002563!7.01e-12!9;CL:0002251!7.01e-12!9;CL:0000066!4.38e-10!25;CL:0000239!6.29e-09!6;CL:0000677!6.29e-09!6;CL:0000212!6.29e-09!6;CL:0000584!6.29e-09!6;CL:0000223!1.87e-08!20;CL:0000075!1.90e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,1.95e-25,9;CL:0002251,1.95e-25,9;CL:0000239,1.35e-18,6;CL:0000677,1.35e-18,6;CL:0000584,1.35e-18,6;CL:0000075,7.64e-16,7;CL:0000066,7.34e-15,25;CL:0002076,1.24e-14,15;CL:0000223,1.40e-10,20;CL:0000682,1.22e-09,3;CL:0002250,1.85e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.71e-19!43;UBERON:0000344!2.76e-19!15;UBERON:0001242!9.46e-17!13;UBERON:0000060!9.46e-17!13;UBERON:0001262!9.46e-17!13;UBERON:0004786!9.46e-17!13;UBERON:0005409!1.31e-16!59;UBERON:0004119!5.51e-15!130;UBERON:0000925!5.51e-15!130;UBERON:0006595!5.51e-15!130;UBERON:0001007!1.32e-14!128;UBERON:0001555!1.32e-14!128;UBERON:0007026!1.32e-14!128;UBERON:0004921!4.55e-13!126;UBERON:0004185!4.55e-13!126;UBERON:0004923!7.26e-13!24;UBERON:0003350!7.01e-12!9;UBERON:0004808!7.01e-12!9;UBERON:0001277!7.01e-12!9;UBERON:0000485!3.10e-09!11;UBERON:0003929!7.34e-09!55|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.70e-50,31;UBERON:0000344,1.13e-42,15;UBERON:0001242,9.14e-37,13;UBERON:0001262,9.14e-37,13;UBERON:0004786,9.14e-37,13;UBERON:0005409,1.94e-31,47;UBERON:0004923,1.88e-25,24;UBERON:0003350,1.95e-25,9;UBERON:0004808,1.95e-25,9;UBERON:0001277,1.95e-25,9;UBERON:0000485,1.58e-20,11;UBERON:0002108,1.36e-12,4;UBERON:0001007,3.09e-12,116;UBERON:0001555,3.09e-12,116;UBERON:0007026,3.09e-12,116;UBERON:0004119,6.13e-12,118;UBERON:0000925,6.13e-12,118;UBERON:0006595,6.13e-12,118;UBERON:0004921,4.71e-10,114;UBERON:0000331,7.58e-10,3;UBERON:0002116,7.58e-10,3;UBERON:0001204,7.58e-10,3;UBERON:0001168,7.58e-10,3;UBERON:0001962,2.48e-07,2;UBERON:0001961,2.48e-07,2;UBERON:0001744,2.48e-07,2|phase1_expression=0,12.2141392673776,14.1049764210756,15.7281389879552,18.0322462780685,5.70789524500425,5.37309073369709,0,0,0,0.171217968225505,0,0,0,0,0.404950534779652,0.699561878128147,0.157731082679119,0,0,0,0,0,9.5995453676044,8.94696196161963,5.7423196411502,7.32295393470427,8.18790684206378,10.0712412311878,7.30887376303799,6.65191531965914,0,0,0,1.1554064790051,1.16364251750945,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,7.40825460104915,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,6.61126416658861,0,0,0.644337306610467,1.21010114774006,0.667134131534611,0.190225626112559,9.01605216934572,0.988193728344065,2.01068167040216,1.1937388322469,1.16978452271472,5.39291645192533,4.75503709724327,5.77509692437665,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0.500535317148282,0.196558995113203,0,0,0.482354319504834,0,0,0.162135226775035,0.549122826376163,0,0,0,0.757736633841335,0.896987067609561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0.188368457004691,0,0,0,0,0.276399947608848,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0.385813221962283,0,0,0,0,0,0|short_description=p4@Soat2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:223920 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88908 | |||
|association_with_transcript=-149bp_to_ENSMUST00000023806_5end | |||
|cluster_id=chr15:101980792..101980807,+ | |||
|description=CAGE_peak_4_at_Soat2_5end | |||
|id=chr15:101980792..101980807,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.01e-12!9;CL:0002251!7.01e-12!9;CL:0000066!4.38e-10!25;CL:0000239!6.29e-09!6;CL:0000677!6.29e-09!6;CL:0000212!6.29e-09!6;CL:0000584!6.29e-09!6;CL:0000223!1.87e-08!20;CL:0000075!1.90e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.95e-25,9;CL:0002251,1.95e-25,9;CL:0000239,1.35e-18,6;CL:0000677,1.35e-18,6;CL:0000584,1.35e-18,6;CL:0000075,7.64e-16,7;CL:0000066,7.34e-15,25;CL:0002076,1.24e-14,15;CL:0000223,1.40e-10,20;CL:0000682,1.22e-09,3;CL:0002250,1.85e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.71e-19!43;UBERON:0000344!2.76e-19!15;UBERON:0001242!9.46e-17!13;UBERON:0000060!9.46e-17!13;UBERON:0001262!9.46e-17!13;UBERON:0004786!9.46e-17!13;UBERON:0005409!1.31e-16!59;UBERON:0004119!5.51e-15!130;UBERON:0000925!5.51e-15!130;UBERON:0006595!5.51e-15!130;UBERON:0001007!1.32e-14!128;UBERON:0001555!1.32e-14!128;UBERON:0007026!1.32e-14!128;UBERON:0004921!4.55e-13!126;UBERON:0004185!4.55e-13!126;UBERON:0004923!7.26e-13!24;UBERON:0003350!7.01e-12!9;UBERON:0004808!7.01e-12!9;UBERON:0001277!7.01e-12!9;UBERON:0000485!3.10e-09!11;UBERON:0003929!7.34e-09!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.70e-50,31;UBERON:0000344,1.13e-42,15;UBERON:0001242,9.14e-37,13;UBERON:0001262,9.14e-37,13;UBERON:0004786,9.14e-37,13;UBERON:0005409,1.94e-31,47;UBERON:0004923,1.88e-25,24;UBERON:0003350,1.95e-25,9;UBERON:0004808,1.95e-25,9;UBERON:0001277,1.95e-25,9;UBERON:0000485,1.58e-20,11;UBERON:0002108,1.36e-12,4;UBERON:0001007,3.09e-12,116;UBERON:0001555,3.09e-12,116;UBERON:0007026,3.09e-12,116;UBERON:0004119,6.13e-12,118;UBERON:0000925,6.13e-12,118;UBERON:0006595,6.13e-12,118;UBERON:0004921,4.71e-10,114;UBERON:0000331,7.58e-10,3;UBERON:0002116,7.58e-10,3;UBERON:0001204,7.58e-10,3;UBERON:0001168,7.58e-10,3;UBERON:0001962,2.48e-07,2;UBERON:0001961,2.48e-07,2;UBERON:0001744,2.48e-07,2 | |||
|phase1_expression=0,12.2141392673776,14.1049764210756,15.7281389879552,18.0322462780685,5.70789524500425,5.37309073369709,0,0,0,0.171217968225505,0,0,0,0,0.404950534779652,0.699561878128147,0.157731082679119,0,0,0,0,0,9.5995453676044,8.94696196161963,5.7423196411502,7.32295393470427,8.18790684206378,10.0712412311878,7.30887376303799,6.65191531965914,0,0,0,1.1554064790051,1.16364251750945,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,7.40825460104915,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,6.61126416658861,0,0,0.644337306610467,1.21010114774006,0.667134131534611,0.190225626112559,9.01605216934572,0.988193728344065,2.01068167040216,1.1937388322469,1.16978452271472,5.39291645192533,4.75503709724327,5.77509692437665,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0.500535317148282,0.196558995113203,0,0,0.482354319504834,0,0,0.162135226775035,0.549122826376163,0,0,0,0.757736633841335,0.896987067609561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0.188368457004691,0,0,0,0,0.276399947608848,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p4@Soat2 | |||
}} |
Revision as of 00:34, 5 August 2015
Short description: | p4@Soat2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Soat2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -149bp_to_ENSMUST00000023806_5end |
EntrezGene: | 223920 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.95e-25 | 9 |
epithelial cell of alimentary canal | 1.95e-25 | 9 |
brush border epithelial cell | 1.35e-18 | 6 |
gut absorptive cell | 1.35e-18 | 6 |
enterocyte | 1.35e-18 | 6 |
columnar/cuboidal epithelial cell | 7.64e-16 | 7 |
epithelial cell | 7.34e-15 | 25 |
endo-epithelial cell | 1.24e-14 | 15 |
endodermal cell | 1.40e-10 | 20 |
M cell of gut | 1.22e-09 | 3 |
intestinal crypt stem cell | 1.85e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.70e-50 | 31 |
mucosa | 1.13e-42 | 15 |
intestinal mucosa | 9.14e-37 | 13 |
wall of intestine | 9.14e-37 | 13 |
gastrointestinal system mucosa | 9.14e-37 | 13 |
gastrointestinal system | 1.94e-31 | 47 |
organ component layer | 1.88e-25 | 24 |
epithelium of mucosa | 1.95e-25 | 9 |
gastrointestinal system epithelium | 1.95e-25 | 9 |
intestinal epithelium | 1.95e-25 | 9 |
simple columnar epithelium | 1.58e-20 | 11 |
small intestine | 1.36e-12 | 4 |
digestive system | 3.09e-12 | 116 |
digestive tract | 3.09e-12 | 116 |
primitive gut | 3.09e-12 | 116 |
endoderm-derived structure | 6.13e-12 | 118 |
endoderm | 6.13e-12 | 118 |
presumptive endoderm | 6.13e-12 | 118 |
subdivision of digestive tract | 4.71e-10 | 114 |
ileal mucosa | 7.58e-10 | 3 |
ileum | 7.58e-10 | 3 |
mucosa of small intestine | 7.58e-10 | 3 |
wall of small intestine | 7.58e-10 | 3 |
gut-associated lymphoid tissue | 2.48e-07 | 2 |
mucosa-associated lymphoid tissue | 2.48e-07 | 2 |
lymphoid tissue | 2.48e-07 | 2 |