FFCP PHASE1:Mm9::chr6:123073532..123073546,+: Difference between revisions
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{{FFCP|EntrezGene=26888|HGNC=|MCL_coexpression_id=86|UniProt=Q923C7|association_with_transcript=47bp_to_ENSMUST00000032248_5end|description=CAGE_peak_5_at_Clec4a2_5end|id=chr6:123073532..123073546,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000763,1.20e-10,16;CL:0000049,1.16e-09,19;CL:0000557,5.34e-09,7;CL:0000839,8.38e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!4.89e-11!193;UBERON:0004120!4.89e-11!193;UBERON:0006603!4.89e-11!193;UBERON:0001474!1.01e-10!22;UBERON:0004765!1.01e-10!22;UBERON:0001434!1.01e-10!22;UBERON:0002371!1.08e-10!16;UBERON:0002204!2.38e-09!32;UBERON:0002405!1.41e-07!70;UBERON:0009569!3.30e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.10e-18,16;UBERON:0001474,3.99e-17,22;UBERON:0004765,3.99e-17,22;UBERON:0001434,3.99e-17,22;UBERON:0002204,6.90e-16,32;UBERON:0002193,1.22e-09,48;UBERON:0002405,1.22e-09,48;UBERON:0002390,1.33e-09,45;UBERON:0003061,1.33e-09,45;UBERON:0003887,7.08e-08,10;UBERON:0002106,3.01e-07,6;UBERON:0004457,3.01e-07,6;UBERON:0000042,3.01e-07,6;UBERON:0004854,3.01e-07,6;UBERON:0009034,3.01e-07,6;UBERON:0002095,3.01e-07,6;UBERON:0004782,3.01e-07,6;UBERON:0003281,3.01e-07,6;UBERON:0009664,3.01e-07,6;UBERON:0002296,3.01e-07,6;UBERON:0005602,3.01e-07,6;UBERON:0001179,3.01e-07,6;UBERON:0006293,3.01e-07,6;UBERON:0003081,4.61e-07,87|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66353666541928,4.04950534779652,1.39912375625629,1.57731082679119,1.7824876368746,1.69755860719212,0.935476191661768,0,0,0.639969691173627,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,23.8563029520037,60.9441568728564,34.5525671022707,10.5881667845583,8.87959130445979,10.6812277666854,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,42.2952867122258,67.2429126545543,34.1030455174128,3.89480143673926,1.92109152660777,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0.289864488701678,0,0,0,1.29955283489534,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.79928715803342,4.66088190564909,1.7813056687779,0.693941307064543,0.608930956624282,0.461230994512117,0.301445281105245,0.823120949949934,1.25666591329675,0.494389935468748,0.86759614151947,5.30766331169925,0.970601099684455,3.09178125844551,1.93950101254089,0,0,0,2.29911349687732,0.599075622529601,0,1.39777249780371,0.149790639404823,0,0,0,0,0,0,0.203678727700633,3.73220911830279,1.0108910337347,0.841767423545896,0.130120442962704,0.689706313300419,0,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,0.776110112217047,0,0,0,0,0.556094498451196,0.696504333044333,1.4404749548556,0.199034266818493,2.1066395619397,3.3455227924913,5.96743348730745,0,0,0,0,0,0.308534225774757,0,0.536546802799238,0.583826711835847,0.493679549740441,0.492502392237286,0.405344047729279,0.584799949701329,1.97595103761946,1.34206418760372,0,0,0,1.32225283331772,0.213288250535234,0.232236671860439,0.38660238396628,1.21010114774006,0.667134131534611,1.52180500890047,2.37264530772256,0.988193728344065,0.502670417600539,0.994782360205754,0.779856348476481,0.898819408654221,2.16138049874694,1.1948476395262,0.189667900953082,0.456994050438915,0,0.203651327845314,0.387904974335251,0.420814919341911,0.69560190836683,0.442830443938806,0.31399745568275,0.987177311374404,2.96452627087149,0.500535317148282,0.786235980452812,1.12431056192427,1.21716072833102,2.65294875727659,2.29163266603278,2.87696137450811,2.10775794807546,0.274561413188081,0,2.23284568601102,0.312037673114561,0.757736633841335,0.538192240565737,0.964887042726734,1.66277871149944,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0.837531287209079,0.952174563544055,1.36593553500459,1.7339865851681,1.99318220683897,1.2756381492599,2.45794972073607,2.59027472798843,2.4590339958857,88.9668575241706,134.88860958704,0.491764273019036,2.20749397043786,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.488660878060728,1.15479086080775,0,0,0.604647113929502,0.377210159511796,0.295301892880773,0.614870295887855,1.29214146584111,0,1.06949213515416,0.632073515871632,0,0,0,0.18006109403131,0,0,0.354680467284547,0.356737635204141,0,0.304464949114599,1.17335854031855,0.42366414172764,0.220528398054962,0.98931751764888,0.484393280087717,0.361877549568935,0.596861720015682,0.492422699235184,1.45740418314925,0.18542530201051,3.2465467351592,2.88941615148511,3.88908507476395,4.1441060541032,1.23024804948923,3.43167259809784,0.169978429993855,1.53946597556024,0.552799895217695,0.954670618015114,0.158167996790568,0.609958401380546,0.86404272657441,1.25452977608681,1.09181281873089,0.134864346384821,0.330613822901344,2.87931536182433,0.518459893167171,0.621339313086926,0,0,0,0.194451188344048,0,0,0.234714477291508,0,0.314578033277133,0,0.576060012515731,0.948033361884535,0.405450430580328,0.821687657318618,1.42912905275575,0.895133478337407,1.19208812868759,0.240390899039938,0.590758108698309,0.504832249740738,0.304827226619999,0.201652370273681,0,0.384847366561318,0.116876902181569,0.453460767230423,0,0,0,0.772758376128762,2.064507229963,0.36630324853453,1.50057865355346,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.367687016900028,1.33348036680969,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.377252682772152,0.842773567228942,0.704276676453562,0.402048282689293,0.952587382566147,0.347652977834566,0.38581844092741,1.23625770240992,0.588795680537589,0.685738504770831,1.24233064311536,0.238436189947321,0.726732083161643,0.658765662907314,0.338458431566706,0.182927972872773,0.263069711437843,0.814824683075171,0.561142271657738,0.237270036248348,0.29551344712669,0.818462086339379,0.154936841185966,0.578719832943424,0.499621155875892,1.16965804222704,0.429742108096597,0.956441660344217,1.76473135295612,0.231867835620421|short_description=p5@Clec4a2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:26888 | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q923C7 | |||
|association_with_transcript=47bp_to_ENSMUST00000032248_5end | |||
|cluster_id=chr6:123073532..123073546,+ | |||
|description=CAGE_peak_5_at_Clec4a2_5end | |||
|id=chr6:123073532..123073546,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.20e-10,16;CL:0000049,1.16e-09,19;CL:0000557,5.34e-09,7;CL:0000839,8.38e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.89e-11!193;UBERON:0004120!4.89e-11!193;UBERON:0006603!4.89e-11!193;UBERON:0001474!1.01e-10!22;UBERON:0004765!1.01e-10!22;UBERON:0001434!1.01e-10!22;UBERON:0002371!1.08e-10!16;UBERON:0002204!2.38e-09!32;UBERON:0002405!1.41e-07!70;UBERON:0009569!3.30e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.10e-18,16;UBERON:0001474,3.99e-17,22;UBERON:0004765,3.99e-17,22;UBERON:0001434,3.99e-17,22;UBERON:0002204,6.90e-16,32;UBERON:0002193,1.22e-09,48;UBERON:0002405,1.22e-09,48;UBERON:0002390,1.33e-09,45;UBERON:0003061,1.33e-09,45;UBERON:0003887,7.08e-08,10;UBERON:0002106,3.01e-07,6;UBERON:0004457,3.01e-07,6;UBERON:0000042,3.01e-07,6;UBERON:0004854,3.01e-07,6;UBERON:0009034,3.01e-07,6;UBERON:0002095,3.01e-07,6;UBERON:0004782,3.01e-07,6;UBERON:0003281,3.01e-07,6;UBERON:0009664,3.01e-07,6;UBERON:0002296,3.01e-07,6;UBERON:0005602,3.01e-07,6;UBERON:0001179,3.01e-07,6;UBERON:0006293,3.01e-07,6;UBERON:0003081,4.61e-07,87 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66353666541928,4.04950534779652,1.39912375625629,1.57731082679119,1.7824876368746,1.69755860719212,0.935476191661768,0,0,0.639969691173627,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,23.8563029520037,60.9441568728564,34.5525671022707,10.5881667845583,8.87959130445979,10.6812277666854,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,42.2952867122258,67.2429126545543,34.1030455174128,3.89480143673926,1.92109152660777,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0.289864488701678,0,0,0,1.29955283489534,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.79928715803342,4.66088190564909,1.7813056687779,0.693941307064543,0.608930956624282,0.461230994512117,0.301445281105245,0.823120949949934,1.25666591329675,0.494389935468748,0.86759614151947,5.30766331169925,0.970601099684455,3.09178125844551,1.93950101254089,0,0,0,2.29911349687732,0.599075622529601,0,1.39777249780371,0.149790639404823,0,0,0,0,0,0,0.203678727700633,3.73220911830279,1.0108910337347,0.841767423545896,0.130120442962704,0.689706313300419,0,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,0.776110112217047,0,0,0,0,0.556094498451196,0.696504333044333,1.4404749548556,0.199034266818493,2.1066395619397,3.3455227924913,5.96743348730745,0,0,0,0,0,0.308534225774757,0,0.536546802799238,0.583826711835847,0.493679549740441,0.492502392237286,0.405344047729279,0.584799949701329,1.97595103761946,1.34206418760372,0,0,0,1.32225283331772,0.213288250535234,0.232236671860439,0.38660238396628,1.21010114774006,0.667134131534611,1.52180500890047,2.37264530772256,0.988193728344065,0.502670417600539,0.994782360205754,0.779856348476481,0.898819408654221,2.16138049874694,1.1948476395262,0.189667900953082,0.456994050438915,0,0.203651327845314,0.387904974335251,0.420814919341911,0.69560190836683,0.442830443938806,0.31399745568275,0.987177311374404,2.96452627087149,0.500535317148282,0.786235980452812,1.12431056192427,1.21716072833102,2.65294875727659,2.29163266603278,2.87696137450811,2.10775794807546,0.274561413188081,0,2.23284568601102,0.312037673114561,0.757736633841335,0.538192240565737,0.964887042726734,1.66277871149944,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0.837531287209079,0.952174563544055,1.36593553500459,1.7339865851681,1.99318220683897,1.2756381492599,2.45794972073607,2.59027472798843,2.4590339958857,88.9668575241706,134.88860958704,0.491764273019036,2.20749397043786,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.488660878060728,1.15479086080775,0,0,0.604647113929502,0.377210159511796,0.295301892880773,0.614870295887855,1.29214146584111,0,1.06949213515416,0.632073515871632,0,0,0,0.18006109403131,0,0,0.354680467284547,0.356737635204141,0,0.304464949114599,1.17335854031855,0.42366414172764,0.220528398054962,0.98931751764888,0.484393280087717,0.361877549568935,0.596861720015682,0.492422699235184,1.45740418314925,0.18542530201051,3.2465467351592,2.88941615148511,3.88908507476395,4.1441060541032,1.23024804948923,3.43167259809784,0.169978429993855,1.53946597556024,0.552799895217695,0.954670618015114,0.158167996790568,0.609958401380546,0.86404272657441,1.25452977608681,1.09181281873089,0.134864346384821,0.330613822901344,2.87931536182433,0.518459893167171,0.621339313086926,0,0,0,0.194451188344048,0,0,0.234714477291508,0,0.314578033277133,0,0.576060012515731,0.948033361884535,0.405450430580328,0.821687657318618,1.42912905275575,0.895133478337407,1.19208812868759,0.240390899039938,0.590758108698309,0.504832249740738,0.304827226619999,0.201652370273681,0,0.384847366561318,0.116876902181569,0.453460767230423,0,0,0,0.772758376128762,2.064507229963,0.36630324853453,1.50057865355346,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.367687016900028,1.33348036680969,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.377252682772152,0.842773567228942,0.704276676453562,0.402048282689293,0.952587382566147,0.347652977834566,0.38581844092741,1.23625770240992,0.588795680537589,0.685738504770831,1.24233064311536,0.238436189947321,0.726732083161643,0.658765662907314,0.338458431566706,0.182927972872773,0.263069711437843,0.814824683075171,0.561142271657738,0.237270036248348,0.29551344712669,0.818462086339379,0.154936841185966,0.578719832943424,0.499621155875892,1.16965804222704,0.429742108096597,0.956441660344217,1.76473135295612,0.231867835620421 | |||
|short_description=p5@Clec4a2 | |||
}} |
Revision as of 02:25, 5 August 2015
Short description: | p5@Clec4a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Clec4a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | 47bp_to_ENSMUST00000032248_5end |
EntrezGene: | 26888 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.20e-10 | 16 |
common myeloid progenitor | 1.16e-09 | 19 |
granulocyte monocyte progenitor cell | 5.34e-09 | 7 |
myeloid lineage restricted progenitor cell | 8.38e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.10e-18 | 16 |
bone element | 3.99e-17 | 22 |
skeletal element | 3.99e-17 | 22 |
skeletal system | 3.99e-17 | 22 |
musculoskeletal system | 6.90e-16 | 32 |
hemolymphoid system | 1.22e-09 | 48 |
immune system | 1.22e-09 | 48 |
hematopoietic system | 1.33e-09 | 45 |
blood island | 1.33e-09 | 45 |
intraembryonic coelom | 7.08e-08 | 10 |
spleen | 3.01e-07 | 6 |
cavity lining | 3.01e-07 | 6 |
serous membrane | 3.01e-07 | 6 |
gastrointestinal system mesentery | 3.01e-07 | 6 |
stomach region | 3.01e-07 | 6 |
mesentery | 3.01e-07 | 6 |
gastrointestinal system serosa | 3.01e-07 | 6 |
mesentery of stomach | 3.01e-07 | 6 |
gut mesentery | 3.01e-07 | 6 |
dorsal mesentery | 3.01e-07 | 6 |
dorsal mesogastrium | 3.01e-07 | 6 |
peritoneal cavity | 3.01e-07 | 6 |
spleen primordium | 3.01e-07 | 6 |
lateral plate mesoderm | 4.61e-07 | 87 |