FFCP PHASE1:Mm9::chr2:64860797..64860873,-: Difference between revisions
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{{FFCP|EntrezGene=50915|HGNC=|UniProt=Q9JLM9,A2ASX2|association_with_transcript=0bp_to_ENSMUST00000028252,NM_016719,uc008jvx.1_5end|description=CAGE_peak_1_at_Grb14_5end|id=chr2:64860797..64860873,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.65e-22!122;UBERON:0000025!6.67e-22!114;UBERON:0003914!8.19e-15!47;UBERON:0000468!1.27e-11!333;UBERON:0004535!6.01e-11!23;UBERON:0001009!6.01e-11!23;UBERON:0009569!5.31e-10!66;UBERON:0000477!2.38e-09!154;UBERON:0000922!4.92e-09!328;UBERON:0007100!2.32e-08!18;UBERON:0000948!2.32e-08!18;UBERON:0005498!2.32e-08!18;UBERON:0004140!2.32e-08!18;UBERON:0009881!2.32e-08!18;UBERON:0004141!2.32e-08!18;UBERON:0003084!2.32e-08!18;UBERON:0007005!2.32e-08!18;UBERON:0004139!2.32e-08!18;UBERON:0004291!2.32e-08!18;UBERON:0001017!2.74e-08!73;UBERON:0005743!2.74e-08!73;UBERON:0002100!3.54e-08!98;UBERON:0005177!4.49e-08!85;UBERON:0003103!6.00e-08!43;UBERON:0000073!1.24e-07!75;UBERON:0001016!1.24e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.46e-22,122;UBERON:0000025,5.93e-22,114;UBERON:0003914,7.58e-15,47;UBERON:0004535,5.69e-11,23;UBERON:0001009,5.69e-11,23;UBERON:0009569,5.06e-10,66;UBERON:0010314,1.02e-09,92;UBERON:0000922,2.68e-09,320;UBERON:0007100,2.23e-08,18;UBERON:0000948,2.23e-08,18;UBERON:0005498,2.23e-08,18;UBERON:0004140,2.23e-08,18;UBERON:0009881,2.23e-08,18;UBERON:0004141,2.23e-08,18;UBERON:0003084,2.23e-08,18;UBERON:0007005,2.23e-08,18;UBERON:0004139,2.23e-08,18;UBERON:0004291,2.23e-08,18;UBERON:0001017,2.63e-08,73;UBERON:0003103,5.78e-08,43;UBERON:0005177,9.00e-08,79;UBERON:0001016,1.20e-07,75;UBERON:0002100,4.38e-07,90|phase1_expression=58.294180346145,0.697950815278722,1.36499771816861,0.60492842261366,0,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0.666219523631325,0,0,0.157731082679119,0.137114433605739,0,21.2608225377674,1.09220046320974,0,0.799962113967033,1.60586496747019,0,0.430761996159075,0.861884930743556,1.33016393619462,0.504060259519861,0.221730510655305,0,0,0,5.48818077527422,2.82598897109437,3.06254034393554,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,0,0,170.338394720956,144.259373125369,79.4757436860081,2.34717403304412,53.4161633132094,189.808861882584,208.039992009483,27.4373386385711,53.1884488150395,0,0,0,2.57259436035947,16.0458726365704,18.0485232297105,24.2779753031517,23.8045940672415,23.4517619297286,7.11573517345177,8.89294796111139,13.498495759221,10.8775299882367,10.6572017241915,27.5632101676932,29.2005912044381,8.60623782160365,10.2604513132085,11.1472229516232,19.4242669394586,19.8781686856452,13.229006315215,11.4056110511701,9.19218786610021,39.6417171597799,44.6905683298157,38.7088463805734,23.7395317914349,22.5059603261928,19.2737947106001,25.684835908127,27.0126052815206,27.5036845998258,21.2132581541041,19.9320353118744,18.2671456908795,1.59025005999687,9.06858721281426,32.4648227345879,68.8339101585109,50.3178786943735,89.0510266202398,121.508190062714,97.2218345001218,42.1333260395256,0.852151612890289,0.779358013808606,1.7666978725517,82.8159308286881,25.6652954828636,20.3844191765317,14.2213340630666,26.4119070033681,32.4300627808126,26.2872711407687,39.3934385030757,1.55362730188303,36.5167662099469,14.052311468057,26.4884966131563,25.1370892009104,22.4576734423408,21.4011446986983,24.379318717957,0.494389935468748,109.461713188373,4.42305275974937,20.0590893934787,14.7963817368464,19.8798853785441,1.86391761218122,14.9318206475889,14.8707161837553,3.57639877292028,0,0,0.127070227073065,36.2493347359671,37.0575488283087,13.5706700281894,30.2454317134561,26.8501230196847,41.557608911912,30.9880812459417,18.025567401506,17.7901967972433,2.27450482590307,22.3068367239662,4.03373373184381,5.74755261083682,9.36323074987816,12.9606143338715,11.6342413548771,11.2740073850668,10.026084527891,20.6962696591213,1.5089759505299,3.59301552318857,3.69497360744293,4.60311038097907,3.05851974148158,9.05455632957633,8.23128545631774,13.9323986772945,0.702213187313235,1.02939162845886,0.568326998791185,50.9529400437335,51.8302592558223,68.7837074781077,76.2318048584377,104.678571289619,126.653299680538,153.472403535269,136.819434713806,145.372851247126,177.066398506905,190.105923403592,205.104088151015,269.154176850037,304.516009908687,209.898838941221,44.3711791470309,15.1269780197548,0.991256348951394,3.96675849995316,3.83918850963421,11.6118335930219,14.3042882067524,13.7144796743873,12.008414367623,12.5548913234289,7.59246498471219,10.3760341476127,11.3100843960121,11.3405189063456,14.0374142725766,10.7858329038507,8.86166004486246,7.16908583715722,15.7424357791058,19.9934897067025,24.7957018480777,32.5842124552503,27.1533482034676,23.6357713030374,32.440343544744,31.4409615196553,31.7137430239577,31.3428796361373,60.7727885528655,6.84064933435986,7.46924181430171,9.44420872016386,13.5916281330297,14.7118067448974,27.7542178441748,52.0730008785967,27.725123778531,92.2526348311954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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50915 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JLM9,uniprot:A2ASX2 | |||
|association_with_transcript=0bp_to_ENSMUST00000028252,NM_016719,uc008jvx.1_5end | |||
|cluster_id=chr2:64860797..64860873,- | |||
|description=CAGE_peak_1_at_Grb14_5end | |||
|id=chr2:64860797..64860873,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.65e-22!122;UBERON:0000025!6.67e-22!114;UBERON:0003914!8.19e-15!47;UBERON:0000468!1.27e-11!333;UBERON:0004535!6.01e-11!23;UBERON:0001009!6.01e-11!23;UBERON:0009569!5.31e-10!66;UBERON:0000477!2.38e-09!154;UBERON:0000922!4.92e-09!328;UBERON:0007100!2.32e-08!18;UBERON:0000948!2.32e-08!18;UBERON:0005498!2.32e-08!18;UBERON:0004140!2.32e-08!18;UBERON:0009881!2.32e-08!18;UBERON:0004141!2.32e-08!18;UBERON:0003084!2.32e-08!18;UBERON:0007005!2.32e-08!18;UBERON:0004139!2.32e-08!18;UBERON:0004291!2.32e-08!18;UBERON:0001017!2.74e-08!73;UBERON:0005743!2.74e-08!73;UBERON:0002100!3.54e-08!98;UBERON:0005177!4.49e-08!85;UBERON:0003103!6.00e-08!43;UBERON:0000073!1.24e-07!75;UBERON:0001016!1.24e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.46e-22,122;UBERON:0000025,5.93e-22,114;UBERON:0003914,7.58e-15,47;UBERON:0004535,5.69e-11,23;UBERON:0001009,5.69e-11,23;UBERON:0009569,5.06e-10,66;UBERON:0010314,1.02e-09,92;UBERON:0000922,2.68e-09,320;UBERON:0007100,2.23e-08,18;UBERON:0000948,2.23e-08,18;UBERON:0005498,2.23e-08,18;UBERON:0004140,2.23e-08,18;UBERON:0009881,2.23e-08,18;UBERON:0004141,2.23e-08,18;UBERON:0003084,2.23e-08,18;UBERON:0007005,2.23e-08,18;UBERON:0004139,2.23e-08,18;UBERON:0004291,2.23e-08,18;UBERON:0001017,2.63e-08,73;UBERON:0003103,5.78e-08,43;UBERON:0005177,9.00e-08,79;UBERON:0001016,1.20e-07,75;UBERON:0002100,4.38e-07,90 | |||
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| |||
|short_description=p1@Grb14 | |||
}} |
Revision as of 08:14, 5 August 2015
Short description: | p1@Grb14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grb14_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000028252, NM_016719, uc008jvx.1_5end |
EntrezGene: | 50915 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.46e-22 | 122 |
tube | 5.93e-22 | 114 |
epithelial tube | 7.58e-15 | 47 |
cardiovascular system | 5.69e-11 | 23 |
circulatory system | 5.69e-11 | 23 |
subdivision of trunk | 5.06e-10 | 66 |
structure with developmental contribution from neural crest | 1.02e-09 | 92 |
embryo | 2.68e-09 | 320 |
primary circulatory organ | 2.23e-08 | 18 |
heart | 2.23e-08 | 18 |
primitive heart tube | 2.23e-08 | 18 |
primary heart field | 2.23e-08 | 18 |
anterior lateral plate mesoderm | 2.23e-08 | 18 |
heart tube | 2.23e-08 | 18 |
heart primordium | 2.23e-08 | 18 |
cardiac mesoderm | 2.23e-08 | 18 |
cardiogenic plate | 2.23e-08 | 18 |
heart rudiment | 2.23e-08 | 18 |
central nervous system | 2.63e-08 | 73 |
compound organ | 5.78e-08 | 43 |
trunk region element | 9.00e-08 | 79 |
nervous system | 1.20e-07 | 75 |
trunk | 4.38e-07 | 90 |