FFCP PHASE1:Mm9::chr15:74787548..74787574,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=404|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:74787548..74787574,+|id=chr15:74787548..74787574,+|ontology_enrichment_celltype=CL:0000988!1.15e-12!32;CL:0002032!1.15e-12!32;CL:0000037!1.15e-12!32;CL:0000566!1.15e-12!32;CL:0000837!1.15e-12!32;CL:0000049!1.04e-10!19;CL:0002320!2.36e-09!46;CL:0000134!2.36e-09!46;CL:0002031!5.25e-09!25;CL:0000763!1.52e-08!16;CL:0000219!6.33e-07!54|ontology_enrichment_celltype_v019_2=CL:0000049,7.78e-20,19;CL:0000988,6.30e-18,32;CL:0002032,6.30e-18,32;CL:0000037,6.30e-18,32;CL:0000837,6.30e-18,32;CL:0000763,5.00e-15,16;CL:0002320,1.35e-12,46;CL:0000134,1.35e-12,46;CL:0002031,3.45e-10,25;CL:0000219,5.05e-10,54;CL:0000839,5.66e-10,13;CL:0000050,2.24e-08,9;CL:0000557,3.90e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.32e-17!45;UBERON:0003061!1.32e-17!45;UBERON:0002193!4.19e-17!48;UBERON:0002405!4.08e-16!70;UBERON:0000926!1.63e-10!193;UBERON:0004120!1.63e-10!193;UBERON:0006603!1.63e-10!193;UBERON:0004177!3.96e-10!29;UBERON:0000072!4.10e-10!27;UBERON:0002384!2.36e-09!46;UBERON:0005057!2.69e-09!51;UBERON:0003081!3.33e-09!88;UBERON:0002371!1.94e-08!16;UBERON:0006562!2.37e-08!24;UBERON:0001557!2.37e-08!24;UBERON:0001042!2.37e-08!24;UBERON:0008814!2.37e-08!24;UBERON:0009145!2.37e-08!24;UBERON:0002370!4.04e-08!23;UBERON:0000974!4.04e-08!23;UBERON:0004807!4.04e-08!23;UBERON:0005058!4.04e-08!23;UBERON:0003351!4.04e-08!23;UBERON:0009113!4.04e-08!23;UBERON:0003295!4.04e-08!23;UBERON:0009722!4.04e-08!23;UBERON:0005562!4.04e-08!23;UBERON:0007690!4.04e-08!23;UBERON:0003104!8.64e-08!131;UBERON:0009142!8.64e-08!131;UBERON:0000065!8.88e-08!41;UBERON:0000077!1.46e-07!97;UBERON:0001474!1.48e-07!22;UBERON:0004765!1.48e-07!22;UBERON:0001434!1.48e-07!22;UBERON:0003408!1.60e-07!24;UBERON:0001004!2.19e-07!42;UBERON:0001041!8.14e-07!92;UBERON:0000063!9.46e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.93e-16,48;UBERON:0002405,1.93e-16,48;UBERON:0002390,6.47e-16,45;UBERON:0003061,6.47e-16,45;UBERON:0002384,1.35e-12,46;UBERON:0002371,1.42e-12,16;UBERON:0001474,2.15e-10,22;UBERON:0004765,2.15e-10,22;UBERON:0001434,2.15e-10,22;UBERON:0002204,3.87e-09,32;UBERON:0003081,2.19e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,1.19840510951844,0,0.666219523631325,1.61980213911861,0.699561878128147,6.78243655520211,7.12995054749842,8.91218268775863,0.17008658030214,2.08510997521859,2.61199789138935,0,0,0,0,0,0.190023419456374,0,0,2.54012269383853,1.84519436275371,0,0,0,0,0.837063261473815,2.3440060335714,3.66466620781659,0,0,0.971020706062307,0,0,0,0,0,0,0,0,0,5.87239121202077,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0.899899717281399,2.96659908770092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0.860423876981386,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0.865964164044856,1.26679932737549,1.51657333504435,0,15.2773351351831,0.445326417194474,0.346970653532272,0,0,0.452167921657868,0.23517741427141,0.251333182659351,0,1.59059292611903,2.65383165584962,0.161766849947409,0,0.484875253135222,0,0,0,0.255457055208591,1.07833612055328,3.59941638596045,1.90605340609597,0,0.457500602818626,0,0.173824320192276,0,0,0,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51106593656617,3.86021860672073,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0.146199987425332,0,0.134206418760372,0,0,0,0.528901133327089,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0,1.79763881730844,0,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0.31399745568275,0.123397163921801,1.48226313543574,0.667380422864376,0,0,0.608580364165509,0,0,0.287696137450811,0.162135226775035,1.09824565275233,0,0.372140947668503,0.936113019343682,0,0.538192240565737,0,2.58654466233247,0,0,0,0,0,0.714130922658041,0,0,0,0,0.327726629431476,1.03610989119537,0.433947175744535,4.52373851817817,8.70249094109935,0.491764273019036,2.48343071674259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0.32977250588296,0,0,0,0.164140899745061,0,0,3.41741761595705,0,0.740778109478847,0.565105371014073,1.23024804948923,0.457556346413045,0.679913719975421,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,4.4241556887945,0.608175645870493,0.718976700153791,0.909445760844565,0.895133478337407,1.78813219303138,0.721172697119813,0.738447635872886,1.71642964911851,1.06689529317,1.51239277705261,1.94915761479505,2.30908419936791,2.57129184799452,0.226730383615211,0,0,0,0.19318959403219,1.31377732815827,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695603506861264|short_description=p@chr15:74787548..74787574,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=404 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:74787548..74787574,+ | |||
|description=CAGE_peak_at_chr15:74787548..74787574,+ | |||
|id=chr15:74787548..74787574,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.15e-12!32;CL:0002032!1.15e-12!32;CL:0000037!1.15e-12!32;CL:0000566!1.15e-12!32;CL:0000837!1.15e-12!32;CL:0000049!1.04e-10!19;CL:0002320!2.36e-09!46;CL:0000134!2.36e-09!46;CL:0002031!5.25e-09!25;CL:0000763!1.52e-08!16;CL:0000219!6.33e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,7.78e-20,19;CL:0000988,6.30e-18,32;CL:0002032,6.30e-18,32;CL:0000037,6.30e-18,32;CL:0000837,6.30e-18,32;CL:0000763,5.00e-15,16;CL:0002320,1.35e-12,46;CL:0000134,1.35e-12,46;CL:0002031,3.45e-10,25;CL:0000219,5.05e-10,54;CL:0000839,5.66e-10,13;CL:0000050,2.24e-08,9;CL:0000557,3.90e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.32e-17!45;UBERON:0003061!1.32e-17!45;UBERON:0002193!4.19e-17!48;UBERON:0002405!4.08e-16!70;UBERON:0000926!1.63e-10!193;UBERON:0004120!1.63e-10!193;UBERON:0006603!1.63e-10!193;UBERON:0004177!3.96e-10!29;UBERON:0000072!4.10e-10!27;UBERON:0002384!2.36e-09!46;UBERON:0005057!2.69e-09!51;UBERON:0003081!3.33e-09!88;UBERON:0002371!1.94e-08!16;UBERON:0006562!2.37e-08!24;UBERON:0001557!2.37e-08!24;UBERON:0001042!2.37e-08!24;UBERON:0008814!2.37e-08!24;UBERON:0009145!2.37e-08!24;UBERON:0002370!4.04e-08!23;UBERON:0000974!4.04e-08!23;UBERON:0004807!4.04e-08!23;UBERON:0005058!4.04e-08!23;UBERON:0003351!4.04e-08!23;UBERON:0009113!4.04e-08!23;UBERON:0003295!4.04e-08!23;UBERON:0009722!4.04e-08!23;UBERON:0005562!4.04e-08!23;UBERON:0007690!4.04e-08!23;UBERON:0003104!8.64e-08!131;UBERON:0009142!8.64e-08!131;UBERON:0000065!8.88e-08!41;UBERON:0000077!1.46e-07!97;UBERON:0001474!1.48e-07!22;UBERON:0004765!1.48e-07!22;UBERON:0001434!1.48e-07!22;UBERON:0003408!1.60e-07!24;UBERON:0001004!2.19e-07!42;UBERON:0001041!8.14e-07!92;UBERON:0000063!9.46e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.93e-16,48;UBERON:0002405,1.93e-16,48;UBERON:0002390,6.47e-16,45;UBERON:0003061,6.47e-16,45;UBERON:0002384,1.35e-12,46;UBERON:0002371,1.42e-12,16;UBERON:0001474,2.15e-10,22;UBERON:0004765,2.15e-10,22;UBERON:0001434,2.15e-10,22;UBERON:0002204,3.87e-09,32;UBERON:0003081,2.19e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,1.19840510951844,0,0.666219523631325,1.61980213911861,0.699561878128147,6.78243655520211,7.12995054749842,8.91218268775863,0.17008658030214,2.08510997521859,2.61199789138935,0,0,0,0,0,0.190023419456374,0,0,2.54012269383853,1.84519436275371,0,0,0,0,0.837063261473815,2.3440060335714,3.66466620781659,0,0,0.971020706062307,0,0,0,0,0,0,0,0,0,5.87239121202077,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0.899899717281399,2.96659908770092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0.860423876981386,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0.865964164044856,1.26679932737549,1.51657333504435,0,15.2773351351831,0.445326417194474,0.346970653532272,0,0,0.452167921657868,0.23517741427141,0.251333182659351,0,1.59059292611903,2.65383165584962,0.161766849947409,0,0.484875253135222,0,0,0,0.255457055208591,1.07833612055328,3.59941638596045,1.90605340609597,0,0.457500602818626,0,0.173824320192276,0,0,0,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51106593656617,3.86021860672073,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0.146199987425332,0,0.134206418760372,0,0,0,0.528901133327089,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0,1.79763881730844,0,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0.31399745568275,0.123397163921801,1.48226313543574,0.667380422864376,0,0,0.608580364165509,0,0,0.287696137450811,0.162135226775035,1.09824565275233,0,0.372140947668503,0.936113019343682,0,0.538192240565737,0,2.58654466233247,0,0,0,0,0,0.714130922658041,0,0,0,0,0.327726629431476,1.03610989119537,0.433947175744535,4.52373851817817,8.70249094109935,0.491764273019036,2.48343071674259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0.32977250588296,0,0,0,0.164140899745061,0,0,3.41741761595705,0,0.740778109478847,0.565105371014073,1.23024804948923,0.457556346413045,0.679913719975421,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,4.4241556887945,0.608175645870493,0.718976700153791,0.909445760844565,0.895133478337407,1.78813219303138,0.721172697119813,0.738447635872886,1.71642964911851,1.06689529317,1.51239277705261,1.94915761479505,2.30908419936791,2.57129184799452,0.226730383615211,0,0,0,0.19318959403219,1.31377732815827,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695603506861264 | |||
|short_description=p@chr15:74787548..74787574,+ | |||
}} |
Latest revision as of 11:23, 5 August 2015
Short description: | p@chr15:74787548..74787574, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:74787548..74787574, + |
Coexpression cluster: | MCL_coexpression_mm9:404 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 7.78e-20 | 19 |
hematopoietic cell | 6.30e-18 | 32 |
hematopoietic oligopotent progenitor cell | 6.30e-18 | 32 |
hematopoietic stem cell | 6.30e-18 | 32 |
hematopoietic multipotent progenitor cell | 6.30e-18 | 32 |
myeloid cell | 5.00e-15 | 16 |
connective tissue cell | 1.35e-12 | 46 |
mesenchymal cell | 1.35e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 3.45e-10 | 25 |
motile cell | 5.05e-10 | 54 |
myeloid lineage restricted progenitor cell | 5.66e-10 | 13 |
megakaryocyte-erythroid progenitor cell | 2.24e-08 | 9 |
granulocyte monocyte progenitor cell | 3.90e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.93e-16 | 48 |
immune system | 1.93e-16 | 48 |
hematopoietic system | 6.47e-16 | 45 |
blood island | 6.47e-16 | 45 |
connective tissue | 1.35e-12 | 46 |
bone marrow | 1.42e-12 | 16 |
bone element | 2.15e-10 | 22 |
skeletal element | 2.15e-10 | 22 |
skeletal system | 2.15e-10 | 22 |
musculoskeletal system | 3.87e-09 | 32 |
lateral plate mesoderm | 2.19e-07 | 87 |