FFCP PHASE1:Mm9::chr17:87930258..87930265,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:87930258..87930265,+|id=chr17:87930258..87930265,+|ontology_enrichment_celltype=CL:0002563!5.34e-37!9;CL:0002251!5.34e-37!9;CL:0002076!4.56e-22!15;CL:0002250!8.04e-22!3;CL:0000223!1.54e-21!20;CL:0000239!2.21e-18!6;CL:0000677!2.21e-18!6;CL:0000212!2.21e-18!6;CL:0000584!2.21e-18!6;CL:0000066!4.14e-17!25;CL:0000075!8.33e-16!7;CL:0000115!1.56e-08!1;CL:0000213!1.56e-08!1;CL:0002078!1.56e-08!1;CL:0002262!1.56e-08!1;CL:1000398!1.56e-08!1|ontology_enrichment_celltype_v019_2=CL:0000213,2.74e-44,1;CL:0002078,2.74e-44,1;CL:0000115,2.74e-44,1;CL:0002262,2.74e-44,1;CL:1000398,2.74e-44,1;CL:0000215,8.02e-16,3;CL:0002250,1.12e-15,3;CL:0000182,4.56e-10,5;CL:0000223,6.23e-10,20;CL:0000066,3.41e-08,25;CL:0000222,1.41e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!5.34e-37!9;UBERON:0004808!5.34e-37!9;UBERON:0001277!5.34e-37!9;UBERON:0000485!3.22e-30!11;UBERON:0001242!1.61e-25!13;UBERON:0000060!1.61e-25!13;UBERON:0001262!1.61e-25!13;UBERON:0004786!1.61e-25!13;UBERON:0000344!4.56e-22!15;UBERON:0004923!1.24e-13!24;UBERON:0000160!4.57e-12!43;UBERON:0005409!1.50e-08!59;UBERON:0000353!1.56e-08!1;UBERON:0003497!1.56e-08!1;UBERON:0003909!1.56e-08!1;UBERON:0003835!1.56e-08!1;UBERON:0003513!1.56e-08!1;UBERON:0001281!1.56e-08!1;UBERON:0001280!1.56e-08!1;UBERON:0004647!1.56e-08!1;UBERON:0000029!4.80e-08!1;UBERON:0001097!4.80e-08!1;UBERON:0003968!4.80e-08!1;UBERON:0008785!4.80e-08!1;UBERON:0001467!4.80e-08!1;UBERON:0001421!4.80e-08!1;UBERON:0003929!2.21e-07!55;UBERON:0005911!3.18e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.74e-44,1;UBERON:0001281,2.74e-44,1;UBERON:0000353,2.74e-44,1;UBERON:0003497,2.74e-44,1;UBERON:0003909,2.74e-44,1;UBERON:0003928,2.74e-44,1;UBERON:0003835,2.74e-44,1;UBERON:0003513,2.74e-44,1;UBERON:0001280,2.74e-44,1;UBERON:0004647,2.74e-44,1;UBERON:0002294,2.74e-44,1;UBERON:0001173,2.74e-44,1;UBERON:0004912,2.74e-44,1;UBERON:0005171,2.74e-44,1;UBERON:0000055,4.56e-10,5;UBERON:0007500,4.56e-10,5;UBERON:0001981,4.56e-10,5;UBERON:0002049,4.56e-10,5;UBERON:0007798,4.56e-10,5;UBERON:0004537,4.56e-10,5;UBERON:0006965,4.56e-10,5;UBERON:0000058,1.41e-07,7|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:87930258..87930265,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:87930258..87930265,+ | |||
|description=CAGE_peak_at_chr17:87930258..87930265,+ | |||
|id=chr17:87930258..87930265,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.34e-37!9;CL:0002251!5.34e-37!9;CL:0002076!4.56e-22!15;CL:0002250!8.04e-22!3;CL:0000223!1.54e-21!20;CL:0000239!2.21e-18!6;CL:0000677!2.21e-18!6;CL:0000212!2.21e-18!6;CL:0000584!2.21e-18!6;CL:0000066!4.14e-17!25;CL:0000075!8.33e-16!7;CL:0000115!1.56e-08!1;CL:0000213!1.56e-08!1;CL:0002078!1.56e-08!1;CL:0002262!1.56e-08!1;CL:1000398!1.56e-08!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.74e-44,1;CL:0002078,2.74e-44,1;CL:0000115,2.74e-44,1;CL:0002262,2.74e-44,1;CL:1000398,2.74e-44,1;CL:0000215,8.02e-16,3;CL:0002250,1.12e-15,3;CL:0000182,4.56e-10,5;CL:0000223,6.23e-10,20;CL:0000066,3.41e-08,25;CL:0000222,1.41e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!5.34e-37!9;UBERON:0004808!5.34e-37!9;UBERON:0001277!5.34e-37!9;UBERON:0000485!3.22e-30!11;UBERON:0001242!1.61e-25!13;UBERON:0000060!1.61e-25!13;UBERON:0001262!1.61e-25!13;UBERON:0004786!1.61e-25!13;UBERON:0000344!4.56e-22!15;UBERON:0004923!1.24e-13!24;UBERON:0000160!4.57e-12!43;UBERON:0005409!1.50e-08!59;UBERON:0000353!1.56e-08!1;UBERON:0003497!1.56e-08!1;UBERON:0003909!1.56e-08!1;UBERON:0003835!1.56e-08!1;UBERON:0003513!1.56e-08!1;UBERON:0001281!1.56e-08!1;UBERON:0001280!1.56e-08!1;UBERON:0004647!1.56e-08!1;UBERON:0000029!4.80e-08!1;UBERON:0001097!4.80e-08!1;UBERON:0003968!4.80e-08!1;UBERON:0008785!4.80e-08!1;UBERON:0001467!4.80e-08!1;UBERON:0001421!4.80e-08!1;UBERON:0003929!2.21e-07!55;UBERON:0005911!3.18e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.74e-44,1;UBERON:0001281,2.74e-44,1;UBERON:0000353,2.74e-44,1;UBERON:0003497,2.74e-44,1;UBERON:0003909,2.74e-44,1;UBERON:0003928,2.74e-44,1;UBERON:0003835,2.74e-44,1;UBERON:0003513,2.74e-44,1;UBERON:0001280,2.74e-44,1;UBERON:0004647,2.74e-44,1;UBERON:0002294,2.74e-44,1;UBERON:0001173,2.74e-44,1;UBERON:0004912,2.74e-44,1;UBERON:0005171,2.74e-44,1;UBERON:0000055,4.56e-10,5;UBERON:0007500,4.56e-10,5;UBERON:0001981,4.56e-10,5;UBERON:0002049,4.56e-10,5;UBERON:0007798,4.56e-10,5;UBERON:0004537,4.56e-10,5;UBERON:0006965,4.56e-10,5;UBERON:0000058,1.41e-07,7 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:87930258..87930265,+ | |||
}} |
Latest revision as of 11:29, 5 August 2015
Short description: | p@chr17:87930258..87930265, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:87930258..87930265, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.74e-44 | 1 |
meso-epithelial cell | 2.74e-44 | 1 |
endothelial cell | 2.74e-44 | 1 |
endothelial cell of sinusoid | 2.74e-44 | 1 |
endothelial cell of hepatic sinusoid | 2.74e-44 | 1 |
barrier cell | 8.02e-16 | 3 |
intestinal crypt stem cell | 1.12e-15 | 3 |
hepatocyte | 4.56e-10 | 5 |
endodermal cell | 6.23e-10 | 20 |
epithelial cell | 3.41e-08 | 25 |
mesodermal cell | 1.41e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.74e-44 | 1 |
hepatic sinusoid | 2.74e-44 | 1 |
parenchyma | 2.74e-44 | 1 |
abdomen blood vessel | 2.74e-44 | 1 |
sinusoid | 2.74e-44 | 1 |
digestive system duct | 2.74e-44 | 1 |
abdominal segment blood vessel | 2.74e-44 | 1 |
trunk blood vessel | 2.74e-44 | 1 |
liver parenchyma | 2.74e-44 | 1 |
liver lobule | 2.74e-44 | 1 |
biliary system | 2.74e-44 | 1 |
biliary tree | 2.74e-44 | 1 |
biliary bud | 2.74e-44 | 1 |
hepatic duct | 2.74e-44 | 1 |
vessel | 4.56e-10 | 5 |
epithelial tube open at both ends | 4.56e-10 | 5 |
blood vessel | 4.56e-10 | 5 |
vasculature | 4.56e-10 | 5 |
vascular system | 4.56e-10 | 5 |
blood vasculature | 4.56e-10 | 5 |
vascular cord | 4.56e-10 | 5 |
duct | 1.41e-07 | 7 |