FFCP PHASE1:Mm9::chr11:31770868..31770900,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=67579|HGNC=|UniProt=Q3TSF0|association_with_transcript=0bp_to_uc007iip.1_5end|description=CAGE_peak_2_at_Cpeb4_5end|id=chr11:31770868..31770900,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.15e-10!34;UBERON:0001049!1.05e-08!52;UBERON:0005068!1.05e-08!52;UBERON:0006241!1.05e-08!52;UBERON:0007135!1.05e-08!52;UBERON:0000955!2.59e-08!50;UBERON:0006238!2.59e-08!50;UBERON:0002791!3.43e-08!29;UBERON:0003528!3.43e-08!29;UBERON:0001893!3.43e-08!29;UBERON:0002616!7.75e-08!49;UBERON:0000064!1.37e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.15e-10,34;UBERON:0000073,1.58e-09,54;UBERON:0001049,1.05e-08,52;UBERON:0005068,1.05e-08,52;UBERON:0006241,1.05e-08,52;UBERON:0007135,1.05e-08,52;UBERON:0003528,3.43e-08,29;UBERON:0002791,3.43e-08,29;UBERON:0001893,3.43e-08,29;UBERON:0000955,2.98e-07,47;UBERON:0006238,2.98e-07,47;UBERON:0002616,8.49e-07,46|phase1_expression=6.24580503708696,13.6100408979351,12.739978702907,11.1911758183527,14.0250804384977,9.23335995515394,8.87728034262997,16.140415430197,5.63154888606667,7.72412936862578,2.39705155515707,2.6324812468461,15.9216678836021,15.6482520330005,17.6548173762301,25.5118836911181,18.88817070946,16.5617636813075,24.8177124826387,15.7024171165271,13.0966666832647,2.78014663362479,2.35079810225042,6.39969691173627,6.19405058881359,8.6134794617253,6.46142994238612,7.32602191132023,5.13063232532209,7.81293402255785,3.54768817048488,0.635030673459631,1.23012957516914,0,1.44425809875637,2.65975432573588,1.22501613757421,12.5559489221072,8.5946887897618,17.7998072951091,15.2940186888064,14.3439551841274,9.71020706062307,5.91715044485213,5.17022349219524,5.32285581268876,2.34717403304412,2.61630187656536,2.63623419281366,4.86074747685709,4.33957907038624,5.75010257459886,13.2548258785612,22.4862264023517,14.1159395639835,3.34437266846731,6.30373567865265,4.64104883049698,11.1274053472779,20.6306481916093,8.87363964908651,1.69422266034566,3.55717918444456,5.84934816232909,2.96659908770092,3.5524005747305,3.89480143673926,3.84218305321555,12.7538223139428,12.8255641415106,10.7265730289205,12.5686433137674,11.0434270475807,12.0040983230655,13.1308295294984,9.19218786610021,17.6185409599022,15.0671058940522,14.2854075928306,14.9031505135119,17.3826522844578,13.022834263919,8.93385596804419,9.56696437053856,10.5430790965999,17.0884579574727,17.6540884190888,20.8767379324337,7.57261933331841,6.57472572929034,17.6817338108023,6.0229671388697,1.3599426674155,1.07940638327563,5.84798775702902,2.68816132258401,5.75822122540183,1.1930122580464,2.33807404142582,2.47337702157238,7.60554466794075,10.2661181931454,40.7688383530633,14.2213340630666,2.38140145112336,3.54703811665138,0.505524445014783,7.30776830201984,37.5459931288399,10.2425075954729,5.55153045651635,4.87144765299426,5.76538743140146,6.33035090321015,7.4080885495494,4.64966387919799,16.0676729027343,9.83275627055399,8.84610551949874,6.14714029800155,10.3795513676385,9.69750506270444,14.9113408974498,22.2513405728776,17.8029700791437,7.66371165625774,2.63593273913025,1.79970819298022,3.68503658511888,13.6309481858389,21.0450277296568,28.6491922817331,15.6441888173049,13.8086346958378,15.9996794310861,13.7905073607594,5.19380755636613,10.0769646194175,7.07623723614289,10.5220927943237,3.77349284591841,2.75882525320168,5.94205028357652,4.82255417074288,8.57259889306731,8.71173297936978,7.96464658757695,16.557015727297,2.80238390812695,4.72765200419548,5.63043597324636,3.72632745126877,6.39508673218875,9.4028084960985,6.79081050146213,3.98068533636986,4.21327912387941,4.63226232806487,3.12579849335152,6.21377317606506,4.92504725960302,4.50155153652537,6.8655973319711,8.65762619688577,7.0962871928194,7.90615412151387,5.09719462659276,6.42209383019432,6.91151369636618,4.76085645829376,7.37726166867287,6.72519942156529,7.24515380460467,7.24714661306008,19.3466752678997,22.7419193358219,11.2342386214491,14.5447811664949,4.47905326123991,5.57368012465052,7.7320476793256,9.4791256572971,7.33847544688072,5.89699440948933,6.16887780007865,6.58795818896044,7.54005626400809,8.75408476981064,6.23885078781184,8.98819408654222,5.61958929674205,5.57595565112228,2.0863469104839,4.79843752960861,2.25415471346161,3.46207257337034,4.84881217919064,5.26018649177389,6.32365371242573,5.75679577120448,4.08196692387575,5.55287237648102,4.44678940630723,11.5123122944105,11.9900987019054,9.66907083254871,15.0116489827492,12.7823894668781,12.2220408855082,11.2201493605816,10.8630601939274,6.58947391651396,8.62609239164127,7.44281895337007,5.30464044294753,5.80931419278357,3.04975602987251,4.82443521363367,11.2699446001629,3.41084541186873,4.56301934037672,5.60158783058121,6.10194645550105,10.2178817039508,10.9500074807566,6.43941037930736,9.14283835815908,9.08005227559977,11.1618338060241,10.8149787712387,9.84304396635605,10.2700831592873,9.04747703635634,10.8781136763742,6.39293554924747,9.93372286697037,14.7706542788769,13.83097901788,3.27869890753351,5.30188947129183,5.36363973007636,5.85658116444958,5.38558494331997,5.73525115086125,8.02075226696619,10.4738316391868,7.2865926301481,5.55286130031493,10.2774822266096,21.2072068838393,7.2389443456217,3.38324646967785,7.32991317091092,8.74341651754438,26.5490276679926,3.39892890616974,2.72091201268276,11.6935149448657,10.335566250827,9.83792473420568,10.3371317267288,9.45187696641514,11.7644134866958,18.6461687182131,17.9211634577498,15.470331487228,15.6602218646742,5.04171063287669,2.97524972700335,4.71541477069503,7.98031051390231,7.84822797449111,6.74650984468696,7.00269382963578,12.4376005273766,18.2175580942885,15.4369878638473,18.7970328353287,10.9795810153216,9.58975506357678,7.87857470420701,11.3257220824092,8.45294426226567,13.7214723487777,15.5492501526046,7.01715351074956,7.22258656741876,15.25784501738,22.2811591185271,16.7008066440762,3.90950388985867,4.3384950220334,4.56059913554598,2.86401185404534,3.79603192297362,6.50622294805916,6.15630442684267,6.690825472463,6.33251434863915,9.03591120778299,8.43065248398426,8.37619014348895,6.09190374471426,4.34937519160848,22.5477175473676,4.18646328923141,5.12921320417003,4.4723773319131,4.64975364519832,6.58928889414035,6.21993364822496,5.9894017028217,9.01790362061113,21.0178185118625,16.4177103566983,11.0603892219862,2.8381530140623,3.90301637226344,6.49604114888975,6.80301443536429,9.93406773906325,9.97622231015741,11.3720935924424,11.0053430443481,11.12619377163,8.4693995514946,13.7415611843051,10.9681499469976,13.557720653062,9.9761368790693,8.43546622821446,11.0348043629655,12.4234616109418,10.2390484837061,9.00875882165674,8.97442958909599,9.00347192132076,15.0471631210609,13.5540442228096,16.1113832777512,16.6139698897425,11.8578695817144,19.8673930733486,23.4172108190807,14.8504950050997,17.5625269257446,22.203978040226,18.6393712230655,3.32119512269365,5.98537310101547,6.4878770186571,6.32077464377565,7.33646069197938,8.08911437180062,12.8903102124937,14.2164189494837,10.5903339165299,10.3605856823157,12.4204856946217,14.7128546281139,11.143339388916,11.4605022804716,11.3722228532114,11.4310485907938,9.27074607558844,10.0312794641127,10.714233420886,12.0703114510206,12.6861623382604,12.7782580434723,10.4911923576821,13.0811774969096,10.1638130848557,9.64606529965112,8.96347067076586,9.99664903463803,9.37048385536446,10.661703161497,10.914421667424,11.0325020260631,9.00308294973317,9.76102099471586,9.45242393807593,6.74488560432454,7.48581147025307,9.23945532407683,9.75570493551101,6.61774257358547,14.1439379728457|short_description=p2@Cpeb4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67579 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TSF0 | |||
|association_with_transcript=0bp_to_uc007iip.1_5end | |||
|cluster_id=chr11:31770868..31770900,+ | |||
|description=CAGE_peak_2_at_Cpeb4_5end | |||
|id=chr11:31770868..31770900,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.15e-10!34;UBERON:0001049!1.05e-08!52;UBERON:0005068!1.05e-08!52;UBERON:0006241!1.05e-08!52;UBERON:0007135!1.05e-08!52;UBERON:0000955!2.59e-08!50;UBERON:0006238!2.59e-08!50;UBERON:0002791!3.43e-08!29;UBERON:0003528!3.43e-08!29;UBERON:0001893!3.43e-08!29;UBERON:0002616!7.75e-08!49;UBERON:0000064!1.37e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.15e-10,34;UBERON:0000073,1.58e-09,54;UBERON:0001049,1.05e-08,52;UBERON:0005068,1.05e-08,52;UBERON:0006241,1.05e-08,52;UBERON:0007135,1.05e-08,52;UBERON:0003528,3.43e-08,29;UBERON:0002791,3.43e-08,29;UBERON:0001893,3.43e-08,29;UBERON:0000955,2.98e-07,47;UBERON:0006238,2.98e-07,47;UBERON:0002616,8.49e-07,46 | |||
|phase1_expression=6.24580503708696,13.6100408979351,12.739978702907,11.1911758183527,14.0250804384977,9.23335995515394,8.87728034262997,16.140415430197,5.63154888606667,7.72412936862578,2.39705155515707,2.6324812468461,15.9216678836021,15.6482520330005,17.6548173762301,25.5118836911181,18.88817070946,16.5617636813075,24.8177124826387,15.7024171165271,13.0966666832647,2.78014663362479,2.35079810225042,6.39969691173627,6.19405058881359,8.6134794617253,6.46142994238612,7.32602191132023,5.13063232532209,7.81293402255785,3.54768817048488,0.635030673459631,1.23012957516914,0,1.44425809875637,2.65975432573588,1.22501613757421,12.5559489221072,8.5946887897618,17.7998072951091,15.2940186888064,14.3439551841274,9.71020706062307,5.91715044485213,5.17022349219524,5.32285581268876,2.34717403304412,2.61630187656536,2.63623419281366,4.86074747685709,4.33957907038624,5.75010257459886,13.2548258785612,22.4862264023517,14.1159395639835,3.34437266846731,6.30373567865265,4.64104883049698,11.1274053472779,20.6306481916093,8.87363964908651,1.69422266034566,3.55717918444456,5.84934816232909,2.96659908770092,3.5524005747305,3.89480143673926,3.84218305321555,12.7538223139428,12.8255641415106,10.7265730289205,12.5686433137674,11.0434270475807,12.0040983230655,13.1308295294984,9.19218786610021,17.6185409599022,15.0671058940522,14.2854075928306,14.9031505135119,17.3826522844578,13.022834263919,8.93385596804419,9.56696437053856,10.5430790965999,17.0884579574727,17.6540884190888,20.8767379324337,7.57261933331841,6.57472572929034,17.6817338108023,6.0229671388697,1.3599426674155,1.07940638327563,5.84798775702902,2.68816132258401,5.75822122540183,1.1930122580464,2.33807404142582,2.47337702157238,7.60554466794075,10.2661181931454,40.7688383530633,14.2213340630666,2.38140145112336,3.54703811665138,0.505524445014783,7.30776830201984,37.5459931288399,10.2425075954729,5.55153045651635,4.87144765299426,5.76538743140146,6.33035090321015,7.4080885495494,4.64966387919799,16.0676729027343,9.83275627055399,8.84610551949874,6.14714029800155,10.3795513676385,9.69750506270444,14.9113408974498,22.2513405728776,17.8029700791437,7.66371165625774,2.63593273913025,1.79970819298022,3.68503658511888,13.6309481858389,21.0450277296568,28.6491922817331,15.6441888173049,13.8086346958378,15.9996794310861,13.7905073607594,5.19380755636613,10.0769646194175,7.07623723614289,10.5220927943237,3.77349284591841,2.75882525320168,5.94205028357652,4.82255417074288,8.57259889306731,8.71173297936978,7.96464658757695,16.557015727297,2.80238390812695,4.72765200419548,5.63043597324636,3.72632745126877,6.39508673218875,9.4028084960985,6.79081050146213,3.98068533636986,4.21327912387941,4.63226232806487,3.12579849335152,6.21377317606506,4.92504725960302,4.50155153652537,6.8655973319711,8.65762619688577,7.0962871928194,7.90615412151387,5.09719462659276,6.42209383019432,6.91151369636618,4.76085645829376,7.37726166867287,6.72519942156529,7.24515380460467,7.24714661306008,19.3466752678997,22.7419193358219,11.2342386214491,14.5447811664949,4.47905326123991,5.57368012465052,7.7320476793256,9.4791256572971,7.33847544688072,5.89699440948933,6.16887780007865,6.58795818896044,7.54005626400809,8.75408476981064,6.23885078781184,8.98819408654222,5.61958929674205,5.57595565112228,2.0863469104839,4.79843752960861,2.25415471346161,3.46207257337034,4.84881217919064,5.26018649177389,6.32365371242573,5.75679577120448,4.08196692387575,5.55287237648102,4.44678940630723,11.5123122944105,11.9900987019054,9.66907083254871,15.0116489827492,12.7823894668781,12.2220408855082,11.2201493605816,10.8630601939274,6.58947391651396,8.62609239164127,7.44281895337007,5.30464044294753,5.80931419278357,3.04975602987251,4.82443521363367,11.2699446001629,3.41084541186873,4.56301934037672,5.60158783058121,6.10194645550105,10.2178817039508,10.9500074807566,6.43941037930736,9.14283835815908,9.08005227559977,11.1618338060241,10.8149787712387,9.84304396635605,10.2700831592873,9.04747703635634,10.8781136763742,6.39293554924747,9.93372286697037,14.7706542788769,13.83097901788,3.27869890753351,5.30188947129183,5.36363973007636,5.85658116444958,5.38558494331997,5.73525115086125,8.02075226696619,10.4738316391868,7.2865926301481,5.55286130031493,10.2774822266096,21.2072068838393,7.2389443456217,3.38324646967785,7.32991317091092,8.74341651754438,26.5490276679926,3.39892890616974,2.72091201268276,11.6935149448657,10.335566250827,9.83792473420568,10.3371317267288,9.45187696641514,11.7644134866958,18.6461687182131,17.9211634577498,15.470331487228,15.6602218646742,5.04171063287669,2.97524972700335,4.71541477069503,7.98031051390231,7.84822797449111,6.74650984468696,7.00269382963578,12.4376005273766,18.2175580942885,15.4369878638473,18.7970328353287,10.9795810153216,9.58975506357678,7.87857470420701,11.3257220824092,8.45294426226567,13.7214723487777,15.5492501526046,7.01715351074956,7.22258656741876,15.25784501738,22.2811591185271,16.7008066440762,3.90950388985867,4.3384950220334,4.56059913554598,2.86401185404534,3.79603192297362,6.50622294805916,6.15630442684267,6.690825472463,6.33251434863915,9.03591120778299,8.43065248398426,8.37619014348895,6.09190374471426,4.34937519160848,22.5477175473676,4.18646328923141,5.12921320417003,4.4723773319131,4.64975364519832,6.58928889414035,6.21993364822496,5.9894017028217,9.01790362061113,21.0178185118625,16.4177103566983,11.0603892219862,2.8381530140623,3.90301637226344,6.49604114888975,6.80301443536429,9.93406773906325,9.97622231015741,11.3720935924424,11.0053430443481,11.12619377163,8.4693995514946,13.7415611843051,10.9681499469976,13.557720653062,9.9761368790693,8.43546622821446,11.0348043629655,12.4234616109418,10.2390484837061,9.00875882165674,8.97442958909599,9.00347192132076,15.0471631210609,13.5540442228096,16.1113832777512,16.6139698897425,11.8578695817144,19.8673930733486,23.4172108190807,14.8504950050997,17.5625269257446,22.203978040226,18.6393712230655,3.32119512269365,5.98537310101547,6.4878770186571,6.32077464377565,7.33646069197938,8.08911437180062,12.8903102124937,14.2164189494837,10.5903339165299,10.3605856823157,12.4204856946217,14.7128546281139,11.143339388916,11.4605022804716,11.3722228532114,11.4310485907938,9.27074607558844,10.0312794641127,10.714233420886,12.0703114510206,12.6861623382604,12.7782580434723,10.4911923576821,13.0811774969096,10.1638130848557,9.64606529965112,8.96347067076586,9.99664903463803,9.37048385536446,10.661703161497,10.914421667424,11.0325020260631,9.00308294973317,9.76102099471586,9.45242393807593,6.74488560432454,7.48581147025307,9.23945532407683,9.75570493551101,6.61774257358547,14.1439379728457 | |||
|short_description=p2@Cpeb4 | |||
}} |
Revision as of 19:20, 5 August 2015
Short description: | p2@Cpeb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cpeb4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc007iip.1_5end |
EntrezGene: | 67579 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gray matter | 5.15e-10 | 34 |
regional part of nervous system | 1.58e-09 | 54 |
neural tube | 1.05e-08 | 52 |
neural rod | 1.05e-08 | 52 |
future spinal cord | 1.05e-08 | 52 |
neural keel | 1.05e-08 | 52 |
brain grey matter | 3.43e-08 | 29 |
regional part of telencephalon | 3.43e-08 | 29 |
telencephalon | 3.43e-08 | 29 |
brain | 2.98e-07 | 47 |
future brain | 2.98e-07 | 47 |
regional part of brain | 8.49e-07 | 46 |