FFCP PHASE1:Mm9::chr11:35759012..35759018,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:35759012..35759018,+|id=chr11:35759012..35759018,+|ontology_enrichment_celltype=CL:0002563!3.13e-26!9;CL:0002251!3.13e-26!9;CL:0000239!1.23e-17!6;CL:0000677!1.23e-17!6;CL:0000212!1.23e-17!6;CL:0000584!1.23e-17!6;CL:0000066!3.58e-15!25;CL:0002076!4.89e-15!15;CL:0000075!5.14e-15!7;CL:0000223!1.64e-13!20;CL:0002250!3.63e-10!3|ontology_enrichment_celltype_v019_2=CL:0002563,7.40e-52,9;CL:0002251,7.40e-52,9;CL:0000066,9.74e-35,25;CL:0002076,5.67e-31,15;CL:0000239,3.04e-30,6;CL:0000677,3.04e-30,6;CL:0000584,3.04e-30,6;CL:0000223,2.47e-29,20;CL:0000075,5.94e-26,7;CL:0002250,1.42e-23,3;CL:0000682,1.77e-10,3;CL:0000213,6.23e-09,1;CL:0002078,6.23e-09,1;CL:0000115,6.23e-09,1;CL:0002262,6.23e-09,1;CL:1000398,6.23e-09,1;CL:0002321,7.47e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!3.13e-26!9;UBERON:0004808!3.13e-26!9;UBERON:0001277!3.13e-26!9;UBERON:0000485!3.83e-21!11;UBERON:0000344!2.16e-18!15;UBERON:0001242!1.28e-17!13;UBERON:0000060!1.28e-17!13;UBERON:0001262!1.28e-17!13;UBERON:0004786!1.28e-17!13;UBERON:0004923!9.93e-11!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.40e-52,9;UBERON:0004808,7.40e-52,9;UBERON:0001277,7.40e-52,9;UBERON:0000485,2.27e-42,11;UBERON:0001242,8.49e-36,13;UBERON:0001262,8.49e-36,13;UBERON:0004786,8.49e-36,13;UBERON:0000344,5.67e-31,15;UBERON:0004923,3.48e-19,24;UBERON:0000160,9.90e-15,31;UBERON:0003929,3.19e-10,55;UBERON:0005409,1.66e-09,47;UBERON:0002394,6.23e-09,1;UBERON:0001281,6.23e-09,1;UBERON:0000353,6.23e-09,1;UBERON:0003497,6.23e-09,1;UBERON:0003909,6.23e-09,1;UBERON:0003928,6.23e-09,1;UBERON:0003835,6.23e-09,1;UBERON:0003513,6.23e-09,1;UBERON:0001280,6.23e-09,1;UBERON:0004647,6.23e-09,1;UBERON:0002294,6.23e-09,1;UBERON:0001173,6.23e-09,1;UBERON:0004912,6.23e-09,1;UBERON:0005171,6.23e-09,1;UBERON:0000490,2.21e-08,66;UBERON:0005911,5.58e-08,69|phase1_expression=0,0.697950815278722,1.81999695755814,1.81478526784098,2.00358291978539,2.68606835059024,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,1.14846392823004,0,2.15471232685889,0,0,0,0,0,0,34.662194370153,8.47796691328311,28.3795405204693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,9.27566363845369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:35759012..35759018,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:35759012..35759018,+ | |||
|description=CAGE_peak_at_chr11:35759012..35759018,+ | |||
|id=chr11:35759012..35759018,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.13e-26!9;CL:0002251!3.13e-26!9;CL:0000239!1.23e-17!6;CL:0000677!1.23e-17!6;CL:0000212!1.23e-17!6;CL:0000584!1.23e-17!6;CL:0000066!3.58e-15!25;CL:0002076!4.89e-15!15;CL:0000075!5.14e-15!7;CL:0000223!1.64e-13!20;CL:0002250!3.63e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.40e-52,9;CL:0002251,7.40e-52,9;CL:0000066,9.74e-35,25;CL:0002076,5.67e-31,15;CL:0000239,3.04e-30,6;CL:0000677,3.04e-30,6;CL:0000584,3.04e-30,6;CL:0000223,2.47e-29,20;CL:0000075,5.94e-26,7;CL:0002250,1.42e-23,3;CL:0000682,1.77e-10,3;CL:0000213,6.23e-09,1;CL:0002078,6.23e-09,1;CL:0000115,6.23e-09,1;CL:0002262,6.23e-09,1;CL:1000398,6.23e-09,1;CL:0002321,7.47e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!3.13e-26!9;UBERON:0004808!3.13e-26!9;UBERON:0001277!3.13e-26!9;UBERON:0000485!3.83e-21!11;UBERON:0000344!2.16e-18!15;UBERON:0001242!1.28e-17!13;UBERON:0000060!1.28e-17!13;UBERON:0001262!1.28e-17!13;UBERON:0004786!1.28e-17!13;UBERON:0004923!9.93e-11!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.40e-52,9;UBERON:0004808,7.40e-52,9;UBERON:0001277,7.40e-52,9;UBERON:0000485,2.27e-42,11;UBERON:0001242,8.49e-36,13;UBERON:0001262,8.49e-36,13;UBERON:0004786,8.49e-36,13;UBERON:0000344,5.67e-31,15;UBERON:0004923,3.48e-19,24;UBERON:0000160,9.90e-15,31;UBERON:0003929,3.19e-10,55;UBERON:0005409,1.66e-09,47;UBERON:0002394,6.23e-09,1;UBERON:0001281,6.23e-09,1;UBERON:0000353,6.23e-09,1;UBERON:0003497,6.23e-09,1;UBERON:0003909,6.23e-09,1;UBERON:0003928,6.23e-09,1;UBERON:0003835,6.23e-09,1;UBERON:0003513,6.23e-09,1;UBERON:0001280,6.23e-09,1;UBERON:0004647,6.23e-09,1;UBERON:0002294,6.23e-09,1;UBERON:0001173,6.23e-09,1;UBERON:0004912,6.23e-09,1;UBERON:0005171,6.23e-09,1;UBERON:0000490,2.21e-08,66;UBERON:0005911,5.58e-08,69 | |||
|phase1_expression=0,0.697950815278722,1.81999695755814,1.81478526784098,2.00358291978539,2.68606835059024,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,1.14846392823004,0,2.15471232685889,0,0,0,0,0,0,34.662194370153,8.47796691328311,28.3795405204693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,9.27566363845369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:35759012..35759018,+ | |||
}} |
Latest revision as of 21:01, 5 August 2015
Short description: | p@chr11:35759012..35759018, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:35759012..35759018, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.40e-52 | 9 |
epithelial cell of alimentary canal | 7.40e-52 | 9 |
epithelial cell | 9.74e-35 | 25 |
endo-epithelial cell | 5.67e-31 | 15 |
brush border epithelial cell | 3.04e-30 | 6 |
gut absorptive cell | 3.04e-30 | 6 |
enterocyte | 3.04e-30 | 6 |
endodermal cell | 2.47e-29 | 20 |
columnar/cuboidal epithelial cell | 5.94e-26 | 7 |
intestinal crypt stem cell | 1.42e-23 | 3 |
M cell of gut | 1.77e-10 | 3 |
lining cell | 6.23e-09 | 1 |
meso-epithelial cell | 6.23e-09 | 1 |
endothelial cell | 6.23e-09 | 1 |
endothelial cell of sinusoid | 6.23e-09 | 1 |
endothelial cell of hepatic sinusoid | 6.23e-09 | 1 |
embryonic cell | 7.47e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 7.40e-52 | 9 |
gastrointestinal system epithelium | 7.40e-52 | 9 |
intestinal epithelium | 7.40e-52 | 9 |
simple columnar epithelium | 2.27e-42 | 11 |
intestinal mucosa | 8.49e-36 | 13 |
wall of intestine | 8.49e-36 | 13 |
gastrointestinal system mucosa | 8.49e-36 | 13 |
mucosa | 5.67e-31 | 15 |
organ component layer | 3.48e-19 | 24 |
intestine | 9.90e-15 | 31 |
gut epithelium | 3.19e-10 | 55 |
gastrointestinal system | 1.66e-09 | 47 |
bile duct | 6.23e-09 | 1 |
hepatic sinusoid | 6.23e-09 | 1 |
parenchyma | 6.23e-09 | 1 |
abdomen blood vessel | 6.23e-09 | 1 |
sinusoid | 6.23e-09 | 1 |
digestive system duct | 6.23e-09 | 1 |
abdominal segment blood vessel | 6.23e-09 | 1 |
trunk blood vessel | 6.23e-09 | 1 |
liver parenchyma | 6.23e-09 | 1 |
liver lobule | 6.23e-09 | 1 |
biliary system | 6.23e-09 | 1 |
biliary tree | 6.23e-09 | 1 |
biliary bud | 6.23e-09 | 1 |
hepatic duct | 6.23e-09 | 1 |
unilaminar epithelium | 2.21e-08 | 66 |
endo-epithelium | 5.58e-08 | 69 |