FFCP PHASE1:Mm9::chr1:75125175..75125195,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=46|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:75125175..75125195,-|id=chr1:75125175..75125195,-|ontology_enrichment_celltype=CL:0002563!7.06e-08!9;CL:0002251!7.06e-08!9;CL:0002250!1.69e-07!3;CL:0000066!1.77e-07!25;CL:0002076!2.58e-07!15;CL:0000473!9.06e-07!3;CL:0000627!9.06e-07!3;CL:0000682!9.06e-07!3|ontology_enrichment_celltype_v019_2=CL:0002250,1.98e-13,3;CL:0002563,4.08e-11,9;CL:0002251,4.08e-11,9;CL:0000066,4.16e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.93e-21!43;UBERON:0005409!2.82e-19!59;UBERON:0000344!1.83e-17!15;UBERON:0001242!3.62e-14!13;UBERON:0000060!3.62e-14!13;UBERON:0001262!3.62e-14!13;UBERON:0004786!3.62e-14!13;UBERON:0004923!9.69e-14!24;UBERON:0004119!1.63e-11!130;UBERON:0000925!1.63e-11!130;UBERON:0006595!1.63e-11!130;UBERON:0001007!6.86e-11!128;UBERON:0001555!6.86e-11!128;UBERON:0007026!6.86e-11!128;UBERON:0004921!2.41e-09!126;UBERON:0004185!2.41e-09!126;UBERON:0003350!7.06e-08!9;UBERON:0004808!7.06e-08!9;UBERON:0001277!7.06e-08!9;UBERON:0000331!5.31e-07!3;UBERON:0002116!5.31e-07!3;UBERON:0001204!5.31e-07!3;UBERON:0001168!5.31e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.73e-33,31;UBERON:0000344,9.00e-25,15;UBERON:0005409,8.03e-24,47;UBERON:0001242,1.10e-18,13;UBERON:0001262,1.10e-18,13;UBERON:0004786,1.10e-18,13;UBERON:0004923,2.87e-18,24;UBERON:0002108,9.77e-16,4;UBERON:0000331,1.93e-12,3;UBERON:0002116,1.93e-12,3;UBERON:0001204,1.93e-12,3;UBERON:0001168,1.93e-12,3;UBERON:0003350,4.08e-11,9;UBERON:0004808,4.08e-11,9;UBERON:0001277,4.08e-11,9;UBERON:0001007,4.57e-10,116;UBERON:0001555,4.57e-10,116;UBERON:0007026,4.57e-10,116;UBERON:0004119,7.77e-10,118;UBERON:0000925,7.77e-10,118;UBERON:0006595,7.77e-10,118;UBERON:0000485,4.74e-09,11;UBERON:0001962,1.91e-08,2;UBERON:0001961,1.91e-08,2;UBERON:0001744,1.91e-08,2;UBERON:0004921,6.14e-08,114|phase1_expression=0,0.348975407639361,0,0,0,2.18243053485457,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,1.37645568640302,0.57423196411502,3.01533397311352,2.15471232685889,2.09025761402011,2.77233142735924,2.21730510655305,0,0,0,8.95440021228951,8.81043620400009,12.2501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,71.1921507074997,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0,0,0,0.403367049246685,0.22237804384487,1.71203063501303,1.42358718463353,2.79988223030818,1.75934646160189,2.38747766449381,2.72949721966768,0,0.648414149624083,2.38969527905241,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.194915761479505,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr1:75125175..75125195,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:75125175..75125195,- | |||
|description=CAGE_peak_at_chr1:75125175..75125195,- | |||
|id=chr1:75125175..75125195,- | |||
|ontology_enrichment_celltype=CL:0002563!7.06e-08!9;CL:0002251!7.06e-08!9;CL:0002250!1.69e-07!3;CL:0000066!1.77e-07!25;CL:0002076!2.58e-07!15;CL:0000473!9.06e-07!3;CL:0000627!9.06e-07!3;CL:0000682!9.06e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.98e-13,3;CL:0002563,4.08e-11,9;CL:0002251,4.08e-11,9;CL:0000066,4.16e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.93e-21!43;UBERON:0005409!2.82e-19!59;UBERON:0000344!1.83e-17!15;UBERON:0001242!3.62e-14!13;UBERON:0000060!3.62e-14!13;UBERON:0001262!3.62e-14!13;UBERON:0004786!3.62e-14!13;UBERON:0004923!9.69e-14!24;UBERON:0004119!1.63e-11!130;UBERON:0000925!1.63e-11!130;UBERON:0006595!1.63e-11!130;UBERON:0001007!6.86e-11!128;UBERON:0001555!6.86e-11!128;UBERON:0007026!6.86e-11!128;UBERON:0004921!2.41e-09!126;UBERON:0004185!2.41e-09!126;UBERON:0003350!7.06e-08!9;UBERON:0004808!7.06e-08!9;UBERON:0001277!7.06e-08!9;UBERON:0000331!5.31e-07!3;UBERON:0002116!5.31e-07!3;UBERON:0001204!5.31e-07!3;UBERON:0001168!5.31e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.73e-33,31;UBERON:0000344,9.00e-25,15;UBERON:0005409,8.03e-24,47;UBERON:0001242,1.10e-18,13;UBERON:0001262,1.10e-18,13;UBERON:0004786,1.10e-18,13;UBERON:0004923,2.87e-18,24;UBERON:0002108,9.77e-16,4;UBERON:0000331,1.93e-12,3;UBERON:0002116,1.93e-12,3;UBERON:0001204,1.93e-12,3;UBERON:0001168,1.93e-12,3;UBERON:0003350,4.08e-11,9;UBERON:0004808,4.08e-11,9;UBERON:0001277,4.08e-11,9;UBERON:0001007,4.57e-10,116;UBERON:0001555,4.57e-10,116;UBERON:0007026,4.57e-10,116;UBERON:0004119,7.77e-10,118;UBERON:0000925,7.77e-10,118;UBERON:0006595,7.77e-10,118;UBERON:0000485,4.74e-09,11;UBERON:0001962,1.91e-08,2;UBERON:0001961,1.91e-08,2;UBERON:0001744,1.91e-08,2;UBERON:0004921,6.14e-08,114 | |||
|phase1_expression=0,0.348975407639361,0,0,0,2.18243053485457,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,1.37645568640302,0.57423196411502,3.01533397311352,2.15471232685889,2.09025761402011,2.77233142735924,2.21730510655305,0,0,0,8.95440021228951,8.81043620400009,12.2501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,71.1921507074997,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0,0,0,0.403367049246685,0.22237804384487,1.71203063501303,1.42358718463353,2.79988223030818,1.75934646160189,2.38747766449381,2.72949721966768,0,0.648414149624083,2.38969527905241,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.194915761479505,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr1:75125175..75125195,- | |||
}} |
Latest revision as of 00:31, 6 August 2015
Short description: | p@chr1:75125175..75125195, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:75125175..75125195, - |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.98e-13 | 3 |
intestinal epithelial cell | 4.08e-11 | 9 |
epithelial cell of alimentary canal | 4.08e-11 | 9 |
epithelial cell | 4.16e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.73e-33 | 31 |
mucosa | 9.00e-25 | 15 |
gastrointestinal system | 8.03e-24 | 47 |
intestinal mucosa | 1.10e-18 | 13 |
wall of intestine | 1.10e-18 | 13 |
gastrointestinal system mucosa | 1.10e-18 | 13 |
organ component layer | 2.87e-18 | 24 |
small intestine | 9.77e-16 | 4 |
ileal mucosa | 1.93e-12 | 3 |
ileum | 1.93e-12 | 3 |
mucosa of small intestine | 1.93e-12 | 3 |
wall of small intestine | 1.93e-12 | 3 |
epithelium of mucosa | 4.08e-11 | 9 |
gastrointestinal system epithelium | 4.08e-11 | 9 |
intestinal epithelium | 4.08e-11 | 9 |
digestive system | 4.57e-10 | 116 |
digestive tract | 4.57e-10 | 116 |
primitive gut | 4.57e-10 | 116 |
endoderm-derived structure | 7.77e-10 | 118 |
endoderm | 7.77e-10 | 118 |
presumptive endoderm | 7.77e-10 | 118 |
simple columnar epithelium | 4.74e-09 | 11 |
gut-associated lymphoid tissue | 1.91e-08 | 2 |
mucosa-associated lymphoid tissue | 1.91e-08 | 2 |
lymphoid tissue | 1.91e-08 | 2 |
subdivision of digestive tract | 6.14e-08 | 114 |