FFCP PHASE1:Mm9::chr18:65467393..65467424,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=225638|HGNC=|MCL_coexpression_id=18|UniProt=F6YAA6|association_with_transcript=-31bp_to_ENSMUST00000148078_5end|description=CAGE_peak_7_at_Alpk2_5end|id=chr18:65467393..65467424,-|ontology_enrichment_celltype=CL:0000553!3.83e-21!6;CL:0000556!3.83e-21!6;CL:0000050!6.79e-14!9;CL:0000414!2.98e-11!11;CL:0002027!5.50e-11!3;CL:0002006!5.50e-11!3;CL:0002024!5.50e-11!3;CL:0000839!2.02e-09!13;CL:0002031!5.39e-08!25;CL:0000763!1.57e-07!16|ontology_enrichment_celltype_v019_2=CL:0000553,2.49e-17,6;CL:0000556,2.49e-17,6;CL:0000945,1.55e-12,1;CL:0000236,1.55e-12,1;CL:0000826,1.55e-12,1;CL:0000050,8.55e-12,9;CL:0000839,2.31e-08,13;CL:0002031,1.53e-07,25;CL:0000763,6.65e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.84e-08!48;UBERON:0002371!1.57e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.59e-12,1;UBERON:0001097,2.59e-12,1;UBERON:0003968,2.59e-12,1;UBERON:0001467,2.59e-12,1;UBERON:0002193,2.83e-08,48;UBERON:0002405,2.83e-08,48;UBERON:0002106,4.75e-08,6;UBERON:0004457,4.75e-08,6;UBERON:0000042,4.75e-08,6;UBERON:0004854,4.75e-08,6;UBERON:0009034,4.75e-08,6;UBERON:0002095,4.75e-08,6;UBERON:0004782,4.75e-08,6;UBERON:0003281,4.75e-08,6;UBERON:0009664,4.75e-08,6;UBERON:0002296,4.75e-08,6;UBERON:0005602,4.75e-08,6;UBERON:0001179,4.75e-08,6;UBERON:0006293,4.75e-08,6;UBERON:0002371,6.65e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,4.10100814965709,4.79900517620086,1.69755860719212,0,0,0,0.319984845586813,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69791296961662,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19609616558497,0,0,0,0.820165366326151,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p7@Alpk2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:225638 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6YAA6 | |||
|association_with_transcript=-31bp_to_ENSMUST00000148078_5end | |||
|cluster_id=chr18:65467393..65467424,- | |||
|description=CAGE_peak_7_at_Alpk2_5end | |||
|id=chr18:65467393..65467424,- | |||
|ontology_enrichment_celltype=CL:0000553!3.83e-21!6;CL:0000556!3.83e-21!6;CL:0000050!6.79e-14!9;CL:0000414!2.98e-11!11;CL:0002027!5.50e-11!3;CL:0002006!5.50e-11!3;CL:0002024!5.50e-11!3;CL:0000839!2.02e-09!13;CL:0002031!5.39e-08!25;CL:0000763!1.57e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.49e-17,6;CL:0000556,2.49e-17,6;CL:0000945,1.55e-12,1;CL:0000236,1.55e-12,1;CL:0000826,1.55e-12,1;CL:0000050,8.55e-12,9;CL:0000839,2.31e-08,13;CL:0002031,1.53e-07,25;CL:0000763,6.65e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.84e-08!48;UBERON:0002371!1.57e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.59e-12,1;UBERON:0001097,2.59e-12,1;UBERON:0003968,2.59e-12,1;UBERON:0001467,2.59e-12,1;UBERON:0002193,2.83e-08,48;UBERON:0002405,2.83e-08,48;UBERON:0002106,4.75e-08,6;UBERON:0004457,4.75e-08,6;UBERON:0000042,4.75e-08,6;UBERON:0004854,4.75e-08,6;UBERON:0009034,4.75e-08,6;UBERON:0002095,4.75e-08,6;UBERON:0004782,4.75e-08,6;UBERON:0003281,4.75e-08,6;UBERON:0009664,4.75e-08,6;UBERON:0002296,4.75e-08,6;UBERON:0005602,4.75e-08,6;UBERON:0001179,4.75e-08,6;UBERON:0006293,4.75e-08,6;UBERON:0002371,6.65e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,4.10100814965709,4.79900517620086,1.69755860719212,0,0,0,0.319984845586813,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69791296961662,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19609616558497,0,0,0,0.820165366326151,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p7@Alpk2 | |||
}} |
Revision as of 00:51, 6 August 2015
Short description: | p7@Alpk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Alpk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -31bp_to_ENSMUST00000148078_5end |
EntrezGene: | 225638 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.49e-17 | 6 |
megakaryocyte | 2.49e-17 | 6 |
lymphocyte of B lineage | 1.55e-12 | 1 |
B cell | 1.55e-12 | 1 |
pro-B cell | 1.55e-12 | 1 |
megakaryocyte-erythroid progenitor cell | 8.55e-12 | 9 |
myeloid lineage restricted progenitor cell | 2.31e-08 | 13 |
hematopoietic lineage restricted progenitor cell | 1.53e-07 | 25 |
myeloid cell | 6.65e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.59e-12 | 1 |
axillary lymph node | 2.59e-12 | 1 |
peripheral lymph node | 2.59e-12 | 1 |
shoulder | 2.59e-12 | 1 |
hemolymphoid system | 2.83e-08 | 48 |
immune system | 2.83e-08 | 48 |
spleen | 4.75e-08 | 6 |
cavity lining | 4.75e-08 | 6 |
serous membrane | 4.75e-08 | 6 |
gastrointestinal system mesentery | 4.75e-08 | 6 |
stomach region | 4.75e-08 | 6 |
mesentery | 4.75e-08 | 6 |
gastrointestinal system serosa | 4.75e-08 | 6 |
mesentery of stomach | 4.75e-08 | 6 |
gut mesentery | 4.75e-08 | 6 |
dorsal mesentery | 4.75e-08 | 6 |
dorsal mesogastrium | 4.75e-08 | 6 |
peritoneal cavity | 4.75e-08 | 6 |
spleen primordium | 4.75e-08 | 6 |
bone marrow | 6.65e-07 | 16 |