FFCP PHASE1:Mm9::chr19:10312449..10312462,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=57|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:10312449..10312462,-|id=chr19:10312449..10312462,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,7.57e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!4.23e-16!9;UBERON:0000019!4.23e-16!9;UBERON:0000047!4.23e-16!9;UBERON:0004088!4.23e-16!9;UBERON:0002104!4.23e-16!9;UBERON:0001456!4.23e-16!9;UBERON:0003072!4.23e-16!9;UBERON:0003071!4.23e-16!9;UBERON:0004128!4.23e-16!9;UBERON:0001444!1.01e-12!11;UBERON:0000020!1.84e-11!12;UBERON:0001032!1.84e-11!12;UBERON:0004456!1.84e-11!12;UBERON:0005085!2.14e-10!13;UBERON:0002298!4.49e-07!6;UBERON:0000033!6.31e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.59e-50,9;UBERON:0000019,1.59e-50,9;UBERON:0000047,1.59e-50,9;UBERON:0010312,1.59e-50,9;UBERON:0004088,1.59e-50,9;UBERON:0002104,1.59e-50,9;UBERON:0001456,1.59e-50,9;UBERON:0003072,1.59e-50,9;UBERON:0004128,1.59e-50,9;UBERON:0003071,1.59e-50,9;UBERON:0001444,3.51e-41,11;UBERON:0000020,1.13e-37,12;UBERON:0001032,1.13e-37,12;UBERON:0004456,1.13e-37,12;UBERON:0000033,1.05e-34,13;UBERON:0005085,1.05e-34,13;UBERON:0002346,1.87e-15,64;UBERON:0003075,1.87e-15,64;UBERON:0007284,1.87e-15,64;UBERON:0010371,2.50e-13,73;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0003056,1.35e-12,49;UBERON:0007811,7.18e-12,36;UBERON:0001896,9.34e-12,2;UBERON:0002298,9.34e-12,2;UBERON:0005290,9.34e-12,2;UBERON:0010096,9.34e-12,2;UBERON:0010314,3.42e-10,92;UBERON:0000153,9.38e-10,43;UBERON:0004684,7.57e-08,3;UBERON:0002275,7.57e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.893811366596314,1.0752457327937,0,0,0,1.11673199600552,0,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,0,0,0.255715457330331,0.20778804455956,0.973447578406546,0.101839363850316,0,0,4.62972082950243,4.81445638962004,5.9774547152703,10.6236656585156,8.13806016312861,15.3762488082001,9.73664274164858,6.46541899462129,10.6068382002996,0,0,0,0,0,0,0,0,0,0,0,0.828503090142008,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,2.22702204525186,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0,0,0.209088296014469,0,0.269728692769641,0,0.523511883968059,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0.64183841918363,0,0,0.377252682772152,0.280924522409647,0.192075457214608,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0,0,0,0.220591419119515,0|short_description=p@chr19:10312449..10312462,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:10312449..10312462,- | |||
|description=CAGE_peak_at_chr19:10312449..10312462,- | |||
|id=chr19:10312449..10312462,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.57e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!4.23e-16!9;UBERON:0000019!4.23e-16!9;UBERON:0000047!4.23e-16!9;UBERON:0004088!4.23e-16!9;UBERON:0002104!4.23e-16!9;UBERON:0001456!4.23e-16!9;UBERON:0003072!4.23e-16!9;UBERON:0003071!4.23e-16!9;UBERON:0004128!4.23e-16!9;UBERON:0001444!1.01e-12!11;UBERON:0000020!1.84e-11!12;UBERON:0001032!1.84e-11!12;UBERON:0004456!1.84e-11!12;UBERON:0005085!2.14e-10!13;UBERON:0002298!4.49e-07!6;UBERON:0000033!6.31e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.59e-50,9;UBERON:0000019,1.59e-50,9;UBERON:0000047,1.59e-50,9;UBERON:0010312,1.59e-50,9;UBERON:0004088,1.59e-50,9;UBERON:0002104,1.59e-50,9;UBERON:0001456,1.59e-50,9;UBERON:0003072,1.59e-50,9;UBERON:0004128,1.59e-50,9;UBERON:0003071,1.59e-50,9;UBERON:0001444,3.51e-41,11;UBERON:0000020,1.13e-37,12;UBERON:0001032,1.13e-37,12;UBERON:0004456,1.13e-37,12;UBERON:0000033,1.05e-34,13;UBERON:0005085,1.05e-34,13;UBERON:0002346,1.87e-15,64;UBERON:0003075,1.87e-15,64;UBERON:0007284,1.87e-15,64;UBERON:0010371,2.50e-13,73;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0003056,1.35e-12,49;UBERON:0007811,7.18e-12,36;UBERON:0001896,9.34e-12,2;UBERON:0002298,9.34e-12,2;UBERON:0005290,9.34e-12,2;UBERON:0010096,9.34e-12,2;UBERON:0010314,3.42e-10,92;UBERON:0000153,9.38e-10,43;UBERON:0004684,7.57e-08,3;UBERON:0002275,7.57e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.893811366596314,1.0752457327937,0,0,0,1.11673199600552,0,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,0,0,0.255715457330331,0.20778804455956,0.973447578406546,0.101839363850316,0,0,4.62972082950243,4.81445638962004,5.9774547152703,10.6236656585156,8.13806016312861,15.3762488082001,9.73664274164858,6.46541899462129,10.6068382002996,0,0,0,0,0,0,0,0,0,0,0,0.828503090142008,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,2.22702204525186,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0,0,0.209088296014469,0,0.269728692769641,0,0.523511883968059,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0.64183841918363,0,0,0.377252682772152,0.280924522409647,0.192075457214608,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr19:10312449..10312462,- | |||
}} |
Latest revision as of 06:16, 6 August 2015
Short description: | p@chr19:10312449..10312462, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:10312449..10312462, - |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.57e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 1.59e-50 | 9 |
camera-type eye | 1.59e-50 | 9 |
simple eye | 1.59e-50 | 9 |
immature eye | 1.59e-50 | 9 |
ocular region | 1.59e-50 | 9 |
visual system | 1.59e-50 | 9 |
face | 1.59e-50 | 9 |
optic cup | 1.59e-50 | 9 |
optic vesicle | 1.59e-50 | 9 |
eye primordium | 1.59e-50 | 9 |
subdivision of head | 3.51e-41 | 11 |
sense organ | 1.13e-37 | 12 |
sensory system | 1.13e-37 | 12 |
entire sense organ system | 1.13e-37 | 12 |
head | 1.05e-34 | 13 |
ectodermal placode | 1.05e-34 | 13 |
neurectoderm | 1.87e-15 | 64 |
neural plate | 1.87e-15 | 64 |
presumptive neural plate | 1.87e-15 | 64 |
ecto-epithelium | 2.50e-13 | 73 |
ectoderm-derived structure | 3.66e-13 | 95 |
ectoderm | 3.66e-13 | 95 |
presumptive ectoderm | 3.66e-13 | 95 |
pre-chordal neural plate | 1.35e-12 | 49 |
craniocervical region | 7.18e-12 | 36 |
medulla oblongata | 9.34e-12 | 2 |
brainstem | 9.34e-12 | 2 |
myelencephalon | 9.34e-12 | 2 |
future myelencephalon | 9.34e-12 | 2 |
structure with developmental contribution from neural crest | 3.42e-10 | 92 |
anterior region of body | 9.38e-10 | 43 |
raphe nuclei | 7.57e-08 | 3 |
reticular formation | 7.57e-08 | 3 |