FFCP PHASE1:Mm9::chr13:72766011..72766034,-: Difference between revisions
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{{FFCP|EntrezGene=328287|HGNC=|MCL_coexpression_id=37|UniProt=|association_with_transcript=0bp_to_NR_030701,uc011zbn.1_5end|description=CAGE_peak_1_at_Gm20554_5end|id=chr13:72766011..72766034,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!9.31e-12!17;UBERON:0005178!7.47e-10!17;UBERON:0005181!7.47e-10!17;UBERON:0002224!7.47e-10!17;UBERON:0000915!7.47e-10!17;UBERON:0008947!7.47e-10!17;UBERON:0003258!7.47e-10!17;UBERON:0002048!2.19e-09!14;UBERON:0000117!2.19e-09!14;UBERON:0000171!2.19e-09!14;UBERON:0000170!2.19e-09!14;UBERON:0005597!2.19e-09!14;UBERON:0000118!2.19e-09!14|ontology_enrichment_uberon_v019_2=UBERON:0005153,1.58e-15,17;UBERON:0005178,6.42e-13,17;UBERON:0005181,6.42e-13,17;UBERON:0002224,6.42e-13,17;UBERON:0000915,6.42e-13,17;UBERON:0008947,6.42e-13,17;UBERON:0003258,6.42e-13,17;UBERON:0002048,2.80e-12,14;UBERON:0000117,2.80e-12,14;UBERON:0000171,2.80e-12,14;UBERON:0000170,2.80e-12,14;UBERON:0005597,2.80e-12,14;UBERON:0000118,2.80e-12,14;UBERON:0005157,3.06e-12,20|phase1_expression=4.00372117761985,0,0,0,0,0.33575854382378,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,1.88845226963366,2.73717714292689,1.46837401729345,1.56478268869608,0.218025156380447,0,0.972149495371417,0.279972843250725,0,0,0,0,0,0,0,3.64169629547276,4.7609188134483,1.90149421051854,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.383062014255563,0.614426133024974,1.45074916503213,1.37231465403614,1.04182674111352,1.3959149950069,0,0.763991238884051,1.76777151284201,0.854230084794618,0.931997229126503,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,1.53387290320252,0.779358013808606,1.41335829804136,0.845060518660083,0,5.09610479413291,0,1.29894624606728,1.26679932737549,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,1.04853447583376,0,0,0,0,1.0389402227978,0.324482526135515,0.407357455401265,1.24406970610093,2.27450482590307,11.5743020737561,1.95180664444056,1.14951052216736,1.62055916824814,2.10986744970001,0.476255494059295,0.12811372028485,0.749613796477831,2.84573707812917,0,0.756424320671277,1.05570674498369,0.876782929710299,1.11218899690239,2.78601733217733,3.49829631893504,0,0,0,0,1.44988040774851,1.17263029990548,0,1.65721314909647,1.77087808572663,0.617068451549513,1.86027155800326,0.804820204198858,0.583826711835847,0.987359099480883,0.164167464079095,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,1.4255592949172,0.775809948670503,1.26244475802573,2.02356918797623,1.03327103585722,1.56998727841375,0.863780147452604,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,3.51031061316549,1.13694847062291,1.62964976442026,3.05541154395339,4.69380496577004,5.19269398069629,4.52282917683426,4.48807390072937,4.88668946729192,3.32197034473162,2.23236676120482,2.13022309130459,3.28101465545202,2.02508682014116,0,0,44.7505488447323,48.2889306033282,0.321101179975584,0.468846746368813,1.3114795630134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45668381692989,1.81394134178851,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0,1.05418608574999,0,0,0.900305470156551,0,0,0,0.178368817602071,0.164549020602121,0,0.704015124191131,0.847328283455281,8.15955072803359,2.80306630000516,10.333723308538,6.27254419252821,4.8942661041286,7.55048138827282,0,0.370850604021019,0,0,0,0,0,0,0,0,0,5.72802370809068,0.316335993581135,0.203319467126849,0.432021363287205,0.209088296014469,1.52853794622324,2.02296519577231,2.14898984885873,0.523511883968059,0,6.83473244395618,0.56369293868419,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.453460767230423,0.221985953374065,0.897138566094757,0.167884616364078,0.772758376128762,0,0.183151624267265,0.643105137237198,5.01572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0.682934423016537,1.45864030240976,1.04806581313991,1.47074806760011,1.55572709461131,1.85431551515005,0.962757628775446,1.51618327058278,1.52087579934144,1.69763707247469,1.96647165686753,1.15245274328765,1.89537047553524,0.476293691283074,1.62238056322798,2.12200142510076,1.64834360321323,0.883193520806384,3.42869252385415,2.12970967391205,2.38436189947321,1.45346416632329,1.59985946706062,2.36920902096694,2.19513567447327,1.8414879800649,1.35804113845862,2.24456908663095,1.89816028998679,1.28055827088233,2.45538625901814,2.16911577660352,3.47231899766054,3.2475375131933,4.91256377735358,1.93383948643468,0.57386499620653,1.10295709559758,0|short_description=p1@Gm20554}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:328287 | |||
|HGNC= | |||
|MCL_coexpression_id=37 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_030701,uc011zbn.1_5end | |||
|cluster_id=chr13:72766011..72766034,- | |||
|description=CAGE_peak_1_at_Gm20554_5end | |||
|id=chr13:72766011..72766034,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!9.31e-12!17;UBERON:0005178!7.47e-10!17;UBERON:0005181!7.47e-10!17;UBERON:0002224!7.47e-10!17;UBERON:0000915!7.47e-10!17;UBERON:0008947!7.47e-10!17;UBERON:0003258!7.47e-10!17;UBERON:0002048!2.19e-09!14;UBERON:0000117!2.19e-09!14;UBERON:0000171!2.19e-09!14;UBERON:0000170!2.19e-09!14;UBERON:0005597!2.19e-09!14;UBERON:0000118!2.19e-09!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,1.58e-15,17;UBERON:0005178,6.42e-13,17;UBERON:0005181,6.42e-13,17;UBERON:0002224,6.42e-13,17;UBERON:0000915,6.42e-13,17;UBERON:0008947,6.42e-13,17;UBERON:0003258,6.42e-13,17;UBERON:0002048,2.80e-12,14;UBERON:0000117,2.80e-12,14;UBERON:0000171,2.80e-12,14;UBERON:0000170,2.80e-12,14;UBERON:0005597,2.80e-12,14;UBERON:0000118,2.80e-12,14;UBERON:0005157,3.06e-12,20 | |||
|phase1_expression=4.00372117761985,0,0,0,0,0.33575854382378,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,1.88845226963366,2.73717714292689,1.46837401729345,1.56478268869608,0.218025156380447,0,0.972149495371417,0.279972843250725,0,0,0,0,0,0,0,3.64169629547276,4.7609188134483,1.90149421051854,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.383062014255563,0.614426133024974,1.45074916503213,1.37231465403614,1.04182674111352,1.3959149950069,0,0.763991238884051,1.76777151284201,0.854230084794618,0.931997229126503,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,1.53387290320252,0.779358013808606,1.41335829804136,0.845060518660083,0,5.09610479413291,0,1.29894624606728,1.26679932737549,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,1.04853447583376,0,0,0,0,1.0389402227978,0.324482526135515,0.407357455401265,1.24406970610093,2.27450482590307,11.5743020737561,1.95180664444056,1.14951052216736,1.62055916824814,2.10986744970001,0.476255494059295,0.12811372028485,0.749613796477831,2.84573707812917,0,0.756424320671277,1.05570674498369,0.876782929710299,1.11218899690239,2.78601733217733,3.49829631893504,0,0,0,0,1.44988040774851,1.17263029990548,0,1.65721314909647,1.77087808572663,0.617068451549513,1.86027155800326,0.804820204198858,0.583826711835847,0.987359099480883,0.164167464079095,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,1.4255592949172,0.775809948670503,1.26244475802573,2.02356918797623,1.03327103585722,1.56998727841375,0.863780147452604,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,3.51031061316549,1.13694847062291,1.62964976442026,3.05541154395339,4.69380496577004,5.19269398069629,4.52282917683426,4.48807390072937,4.88668946729192,3.32197034473162,2.23236676120482,2.13022309130459,3.28101465545202,2.02508682014116,0,0,44.7505488447323,48.2889306033282,0.321101179975584,0.468846746368813,1.3114795630134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45668381692989,1.81394134178851,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0,1.05418608574999,0,0,0.900305470156551,0,0,0,0.178368817602071,0.164549020602121,0,0.704015124191131,0.847328283455281,8.15955072803359,2.80306630000516,10.333723308538,6.27254419252821,4.8942661041286,7.55048138827282,0,0.370850604021019,0,0,0,0,0,0,0,0,0,5.72802370809068,0.316335993581135,0.203319467126849,0.432021363287205,0.209088296014469,1.52853794622324,2.02296519577231,2.14898984885873,0.523511883968059,0,6.83473244395618,0.56369293868419,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.453460767230423,0.221985953374065,0.897138566094757,0.167884616364078,0.772758376128762,0,0.183151624267265,0.643105137237198,5.01572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0.682934423016537,1.45864030240976,1.04806581313991,1.47074806760011,1.55572709461131,1.85431551515005,0.962757628775446,1.51618327058278,1.52087579934144,1.69763707247469,1.96647165686753,1.15245274328765,1.89537047553524,0.476293691283074,1.62238056322798,2.12200142510076,1.64834360321323,0.883193520806384,3.42869252385415,2.12970967391205,2.38436189947321,1.45346416632329,1.59985946706062,2.36920902096694,2.19513567447327,1.8414879800649,1.35804113845862,2.24456908663095,1.89816028998679,1.28055827088233,2.45538625901814,2.16911577660352,3.47231899766054,3.2475375131933,4.91256377735358,1.93383948643468,0.57386499620653,1.10295709559758,0 | |||
|short_description=p1@Gm20554 | |||
}} |
Revision as of 07:25, 6 August 2015
Short description: | p1@Gm20554 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm20554_5end |
Coexpression cluster: | MCL_coexpression_mm9:37 |
Association with transcript: | 0bp_to_NR_030701, uc011zbn.1_5end |
EntrezGene: | 328287 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial bud | 1.58e-15 | 17 |
thoracic cavity element | 6.42e-13 | 17 |
thoracic segment organ | 6.42e-13 | 17 |
thoracic cavity | 6.42e-13 | 17 |
thoracic segment of trunk | 6.42e-13 | 17 |
respiratory primordium | 6.42e-13 | 17 |
endoderm of foregut | 6.42e-13 | 17 |
lung | 2.80e-12 | 14 |
respiratory tube | 2.80e-12 | 14 |
respiration organ | 2.80e-12 | 14 |
pair of lungs | 2.80e-12 | 14 |
lung primordium | 2.80e-12 | 14 |
lung bud | 2.80e-12 | 14 |
epithelial fold | 3.06e-12 | 20 |