FFCP PHASE2:Hg19::chr13:102142243..102142252,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9358 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6164 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6164 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DQ02 | ||
|association_with_transcript=-50bp_to_ENST00000376162_5end | |association_with_transcript=-50bp_to_ENST00000376162_5end | ||
|cluster_id=chr13:102142243..102142252,+ | |cluster_id=chr13:102142243..102142252,+ | ||
Latest revision as of 08:46, 16 September 2015
| Short description: | p13@ITGBL1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_13_at_ITGBL1_5end |
| Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
| Association with transcript: | -50bp_to_ENST00000376162_5end |
| EntrezGene: | ITGBL1 |
| HGNC: | 6164 |
| UniProt: | B4DQ02 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p13@ITGBL1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell of vascular tree | 8.50e-19 | 24 |
| lymphangioblast | 4.26e-13 | 6 |
| endothelial cell of lymphatic vessel | 4.26e-13 | 6 |
| vascular lymphangioblast | 4.26e-13 | 6 |
| endothelial cell | 1.40e-12 | 36 |
| lining cell | 5.15e-11 | 58 |
| barrier cell | 5.15e-11 | 58 |
| epithelial cell of cervix | 1.89e-10 | 2 |
| thoracic aorta endothelial cell | 3.58e-10 | 2 |
| meso-epithelial cell | 4.43e-10 | 45 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| umbilical cord | 6.19e-17 | 10 |
| blastocyst | 6.19e-17 | 10 |
| blastula | 6.19e-17 | 10 |
| bilaminar disc | 6.19e-17 | 10 |
| inner cell mass | 6.19e-17 | 10 |
| cleaving embryo | 6.19e-17 | 10 |
| connecting stalk | 6.19e-17 | 10 |
| inner cell mass derived epiblast | 6.19e-17 | 10 |
| extraembryonic mesoderm | 6.19e-17 | 10 |
| extraembryonic structure | 1.81e-12 | 24 |
Showing 1 to 10 of 32 entries
