Personal tools

FFCP PHASE2:Hg19::chr13:109248291..109248311,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23026 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:29822 |TSScla...")
 
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:23026
|EntrezGene=23026
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:29822
|HGNC=29822
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:Q9Y6X6,uniprot:F8WBZ5
|UniProt=Q9Y6X6,F8WBZ5
|association_with_transcript=-188bp_to_ENST00000356711,ENST00000397258,NM_015011,uc001vqt.1_5end
|association_with_transcript=-188bp_to_ENST00000356711,ENST00000397258,NM_015011,uc001vqt.1_5end
|cluster_id=chr13:109248291..109248311,+
|cluster_id=chr13:109248291..109248311,+

Latest revision as of 11:18, 16 September 2015

Short description:p10@MYO16
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_10_at_MYO16_5end
Coexpression cluster:C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral
Association with transcript: -188bp_to_ENST00000356711, ENST00000397258, NM_015011, uc001vqt.1_5end
EntrezGene:MYO16
HGNC: 29822
UniProt: Q9Y6X6F8WBZ5
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
2.5
5.0
7.5
10.0
12.5
15.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data