FFCP PHASE2:Hg19::chr1:158301703..158301708,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:910 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1635 |TSSclassi...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1635 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P29016 | ||
|association_with_transcript=-382bp_to_ENST00000368168,NM_001764,uc001frx.2,uc010pic.1_5end | |association_with_transcript=-382bp_to_ENST00000368168,NM_001764,uc001frx.2,uc010pic.1_5end | ||
|cluster_id=chr1:158301703..158301708,- | |cluster_id=chr1:158301703..158301708,- | ||
Latest revision as of 20:49, 17 September 2015
| Short description: | p19@CD1B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_19_at_CD1B_5end |
| Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
| Association with transcript: | -382bp_to_ENST00000368168, NM_001764, uc001frx.2, uc010pic.1_5end |
| EntrezGene: | CD1B |
| HGNC: | 1635 |
| UniProt: | P29016 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p19@CD1B |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| thymus | 3.35e-66 | 4 |
| hemolymphoid system gland | 3.35e-66 | 4 |
| thymic region | 3.35e-66 | 4 |
| pharyngeal gland | 3.35e-66 | 4 |
| thymus primordium | 3.35e-66 | 4 |
| pharyngeal epithelium | 1.22e-44 | 6 |
| hemopoietic organ | 1.80e-38 | 7 |
| immune organ | 1.80e-38 | 7 |
| neck | 2.38e-27 | 10 |
| gland of gut | 2.38e-27 | 10 |
Showing 1 to 10 of 22 entries
