FFCP PHASE2:Hg19::chr11:44117219..44117240,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2132 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3513 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3513 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E9PNL9,E9PJA5 | ||
|association_with_transcript=0bp_to_ENST00000527014,ENST00000532479_5end | |association_with_transcript=0bp_to_ENST00000527014,ENST00000532479_5end | ||
|cluster_id=chr11:44117219..44117240,+ | |cluster_id=chr11:44117219..44117240,+ |
Latest revision as of 00:01, 18 September 2015
Short description: | p1@EXT2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EXT2_5end |
Coexpression cluster: | C2131_Smooth_Fibroblast_gall_leiomyoma_bone_Chondrocyte_mesenchymal |
Association with transcript: | 0bp_to_ENST00000527014, ENST00000532479_5end |
EntrezGene: | EXT2 |
HGNC: | 3513 |
UniProt: | E9PNL9E9PJA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@EXT2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic cell | 6.39e-20 | 250 |
mesodermal cell | 2.20e-18 | 121 |
fibroblast | 4.10e-17 | 76 |
muscle precursor cell | 5.90e-15 | 58 |
myoblast | 5.90e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.90e-15 | 58 |
vascular associated smooth muscle cell | 3.04e-14 | 32 |
muscle cell | 5.72e-14 | 55 |
smooth muscle cell | 9.57e-14 | 43 |
smooth muscle myoblast | 9.57e-14 | 43 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
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vasculature | 3.17e-17 | 78 |
vascular system | 3.17e-17 | 78 |
multilaminar epithelium | 9.21e-17 | 83 |
vessel | 6.43e-16 | 68 |
mesenchyme | 8.52e-16 | 160 |
entire embryonic mesenchyme | 8.52e-16 | 160 |
epithelial tube | 2.51e-15 | 117 |
splanchnic layer of lateral plate mesoderm | 3.04e-15 | 83 |
artery | 8.85e-15 | 42 |
arterial blood vessel | 8.85e-15 | 42 |
Showing 1 to 10 of 43 entries