FFCP PHASE2:Hg19::chr8:53626974..53627032,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9821 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:15574 |TSSclas...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=15574 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8TDY2,E5RH44,E5RJC1,E5RH63 | ||
|association_with_transcript=0bp_to_ENST00000025008,ENST00000435644,ENST00000517963,ENST00000518211,ENST00000518710,ENST00000521611,NM_001083617,NM_014781,uc003xre.3,uc003xrf.3_5end | |association_with_transcript=0bp_to_ENST00000025008,ENST00000435644,ENST00000517963,ENST00000518211,ENST00000518710,ENST00000521611,NM_001083617,NM_014781,uc003xre.3,uc003xrf.3_5end | ||
|cluster_id=chr8:53626974..53627032,- | |cluster_id=chr8:53626974..53627032,- | ||
Latest revision as of 11:50, 18 September 2015
| Short description: | p1@RB1CC1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_RB1CC1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000025008, ENST00000435644, ENST00000517963, ENST00000518211, ENST00000518710, ENST00000521611, NM_001083617, NM_014781, uc003xre.3, uc003xrf.3_5end |
| EntrezGene: | RB1CC1 |
| HGNC: | 15574 |
| UniProt: | Q8TDY2E5RH44E5RJC1E5RH63 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@RB1CC1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 1.79e-19 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.79e-19 | 42 |
| myeloid leukocyte | 2.86e-16 | 72 |
| defensive cell | 1.02e-14 | 48 |
| phagocyte | 1.02e-14 | 48 |
| myeloid lineage restricted progenitor cell | 2.19e-13 | 66 |
| macrophage dendritic cell progenitor | 4.14e-13 | 61 |
| monopoietic cell | 5.29e-13 | 59 |
| monocyte | 5.29e-13 | 59 |
| monoblast | 5.29e-13 | 59 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 7.87e-26 | 114 |
| nervous system | 1.45e-15 | 89 |
| central nervous system | 2.82e-15 | 81 |
| regional part of forebrain | 4.47e-14 | 41 |
| forebrain | 4.47e-14 | 41 |
| anterior neural tube | 4.47e-14 | 41 |
| future forebrain | 4.47e-14 | 41 |
| neural tube | 8.93e-14 | 56 |
| neural rod | 8.93e-14 | 56 |
| future spinal cord | 8.93e-14 | 56 |
Showing 1 to 10 of 37 entries
