FFCP PHASE2:Hg19::chr6:10413188..10413249,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7020 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11742 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11742 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9J6N8 | ||
|association_with_transcript=-76bp_to_ENST00000465858_5end | |association_with_transcript=-76bp_to_ENST00000465858_5end | ||
|cluster_id=chr6:10413188..10413249,- | |cluster_id=chr6:10413188..10413249,- |
Latest revision as of 12:57, 19 September 2015
Short description: | p7@TFAP2A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TFAP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000465858_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | C9J6N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@TFAP2A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.87e-25 | 253 |
endo-epithelial cell | 2.05e-25 | 42 |
endodermal cell | 5.98e-19 | 58 |
respiratory epithelial cell | 1.19e-14 | 13 |
epithelial cell of alimentary canal | 1.40e-12 | 20 |
epithelial cell of tracheobronchial tree | 8.75e-09 | 9 |
epithelial cell of lower respiratory tract | 8.75e-09 | 9 |
transitional epithelial cell | 1.79e-08 | 4 |
urothelial cell | 1.79e-08 | 4 |
extraembryonic cell | 2.35e-08 | 19 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.20e-20 | 160 |
endoderm | 1.20e-20 | 160 |
presumptive endoderm | 1.20e-20 | 160 |
respiratory system | 2.06e-15 | 74 |
extraembryonic membrane | 3.98e-15 | 14 |
membranous layer | 3.98e-15 | 14 |
digestive system | 4.02e-12 | 145 |
digestive tract | 4.02e-12 | 145 |
primitive gut | 4.02e-12 | 145 |
chorion | 2.39e-11 | 7 |
Showing 1 to 10 of 41 entries
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.52e-19 | 14 |
carcinoma | 1.17e-15 | 106 |
adenocarcinoma | 3.08e-10 | 25 |
cell type cancer | 5.61e-10 | 143 |
thoracic cancer | 6.77e-08 | 4 |
breast cancer | 6.77e-08 | 4 |
Showing 1 to 6 of 6 entries