FFCP PHASE2:Hg19::chr1:204042275..204042286,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11192 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 00:12, 20 September 2015
Short description: | p4@SOX13 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SOX13_5end |
Coexpression cluster: | C3925_Mast_testicular_breast_choriocarcinoma_Mesenchymal_gastrointestinal_smallcell |
Association with transcript: | 0bp_to_ENST00000530882, ENST00000534185_5end |
EntrezGene: | SOX13 |
HGNC: | 11192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@SOX13 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 2.69e-13 | 253 |
melanocyte | 4.14e-08 | 10 |
melanoblast | 4.14e-08 | 10 |
germ line cell | 1.20e-07 | 7 |
germ cell | 1.20e-07 | 7 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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adult organism | 1.27e-16 | 114 |
organ system subdivision | 4.71e-10 | 223 |
trunk region element | 2.07e-08 | 101 |
subdivision of digestive tract | 3.34e-08 | 118 |
anatomical conduit | 6.54e-08 | 240 |
tube | 4.74e-07 | 192 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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carcinoma | 6.15e-15 | 106 |
cell type cancer | 8.79e-11 | 143 |
Showing 1 to 2 of 2 entries