FFCP PHASE2:Hg19::chr4:113437332..113437337,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:63973 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:13805 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=63973 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=13805 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9H2A3 | ||
|association_with_transcript=-4bp_to_ENST00000313341,NM_024019,uc003ias.2_5end | |association_with_transcript=-4bp_to_ENST00000313341,NM_024019,uc003ias.2_5end | ||
|cluster_id=chr4:113437332..113437337,- | |cluster_id=chr4:113437332..113437337,- |
Latest revision as of 17:58, 24 September 2015
Short description: | p1@NEUROG2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEUROG2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -4bp_to_ENST00000313341, NM_024019, uc003ias.2_5end |
EntrezGene: | NEUROG2 |
HGNC: | 13805 |
UniProt: | Q9H2A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@NEUROG2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuronal stem cell | 2.58e-22 | 8 |
neural cell | 9.51e-20 | 25 |
neurectodermal cell | 7.02e-17 | 59 |
ectodermal cell | 1.75e-13 | 72 |
neuron | 1.93e-11 | 6 |
neuroblast | 1.93e-11 | 6 |
electrically signaling cell | 1.93e-11 | 6 |
astrocyte of the cerebral cortex | 4.51e-10 | 3 |
lymphocyte of B lineage | 8.76e-10 | 24 |
pro-B cell | 8.76e-10 | 24 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
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nervous system | 2.61e-12 | 89 |
central nervous system | 4.95e-10 | 81 |
ectoderm-derived structure | 2.70e-08 | 171 |
ectoderm | 2.70e-08 | 171 |
presumptive ectoderm | 2.70e-08 | 171 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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genetic disease | 2.17e-08 | 1 |
monogenic disease | 2.17e-08 | 1 |
xeroderma pigmentosum | 2.17e-08 | 1 |
Showing 1 to 3 of 3 entries