FFCP PHASE2:Hg19::chr22:39917189..39917207,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:468 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:786 |TSSclassifier=strong |U...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=786 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96AQ3 | ||
|association_with_transcript=-63bp_to_CR456384_5end | |association_with_transcript=-63bp_to_CR456384_5end | ||
|cluster_id=chr22:39917189..39917207,+ | |cluster_id=chr22:39917189..39917207,+ |
Latest revision as of 19:04, 24 September 2015
Short description: | p5@ATF4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ATF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -63bp_to_CR456384_5end |
EntrezGene: | ATF4 |
HGNC: | 786 |
UniProt: | Q96AQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@ATF4 |
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0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.50e-08 | 6 |
chondrocyte | 1.50e-08 | 6 |
outer root sheath cell | 7.56e-08 | 2 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.06e-08 | 10 |
blastocyst | 5.06e-08 | 10 |
blastula | 5.06e-08 | 10 |
bilaminar disc | 5.06e-08 | 10 |
inner cell mass | 5.06e-08 | 10 |
cleaving embryo | 5.06e-08 | 10 |
connecting stalk | 5.06e-08 | 10 |
inner cell mass derived epiblast | 5.06e-08 | 10 |
extraembryonic mesoderm | 5.06e-08 | 10 |
hair root sheath | 7.56e-08 | 2 |
Showing 1 to 10 of 15 entries