FFCP PHASE2:Mm9::chr2:130275995..130276045,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:19262 |HGNC= |MCL_coexpression_id=347 |TSSclassifier=NA |UniProt=uniprot:Q91V35,uniprot:E9QLV5,uniprot:Q3TRY9,unipr...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=19262 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=347 | |MCL_coexpression_id=347 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q91V35,E9QLV5,Q3TRY9,P18052 | ||
|association_with_transcript=0bp_to_ENSMUST00000028769,ENSMUST00000110266,NM_001163688,NM_008980,uc008mjc.2,uc008mjd.2_5end | |association_with_transcript=0bp_to_ENSMUST00000028769,ENSMUST00000110266,NM_001163688,NM_008980,uc008mjc.2,uc008mjd.2_5end | ||
|cluster_id=chr2:130275995..130276045,+ | |cluster_id=chr2:130275995..130276045,+ | ||
Latest revision as of 17:43, 25 September 2015
| Short description: | p1@Ptpra |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ptpra_5end |
| Coexpression cluster: | MCL_coexpression_mm9:347 |
| Association with transcript: | 0bp_to_ENSMUST00000028769, ENSMUST00000110266, NM_001163688, NM_008980, uc008mjc.2, uc008mjd.2_5end |
| EntrezGene: | Ptpra |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Ptpra |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ectodermal cell | 1.81e-17 | 44 |
| neurectodermal cell | 1.81e-17 | 44 |
| neural cell | 3.49e-17 | 43 |
| electrically responsive cell | 3.56e-15 | 39 |
| electrically active cell | 3.56e-15 | 39 |
| neuron | 7.15e-13 | 33 |
| neuronal stem cell | 7.15e-13 | 33 |
| neuroblast | 7.15e-13 | 33 |
| electrically signaling cell | 7.15e-13 | 33 |
| CNS neuron (sensu Vertebrata) | 4.54e-12 | 23 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| ectoderm-derived structure | 6.98e-33 | 95 |
| ectoderm | 6.98e-33 | 95 |
| presumptive ectoderm | 6.98e-33 | 95 |
| nervous system | 5.02e-30 | 75 |
| central nervous system | 1.14e-28 | 73 |
| ecto-epithelium | 1.78e-23 | 73 |
| regional part of nervous system | 2.96e-22 | 54 |
| neurectoderm | 2.49e-21 | 64 |
| neural plate | 2.49e-21 | 64 |
| presumptive neural plate | 2.49e-21 | 64 |
Showing 1 to 10 of 36 entries
