Personal tools

UBERON:0000949

From FANTOM5_SSTAR

Revision as of 17:10, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:endocrine system
Definition:"Anatomical system that consists of the glands and parts of glands that produce endocrine secretions and help to integrate and control bodily metabolic activity." [NLM:endocrine+system, Wikipedia:Endocrine_system]
Xrefs:
links:

AAO:0010279
EFO:0002969
EHDAA2:0002224
EV:0100128
FBbt:00005068
FMA:9668
GAID:439
MA:0000012
MESH:A.06
ncithesaurus:Endocrine_System
SCTID:278876000
TAO:0001158
VHOG:0000098
XAO:0000158

ZFA:0001158
Synonyms: "endocrine glandular system" EXACT [EHDAA2:0002224]
"endocrine system" EXACT []
"systema endocrinum" EXACT []
Alt_id: UBERON:FBbt_00003214-FBbt_00005068-FMA_9668-MA_0000012-XAO_0000158-ZFA_0001158
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system)
disjoint_from:UBERON:0000990(reproductive system),UBERON:0001004(respiratory system),UBERON:0001007(digestive system),UBERON:0001008(renal system),UBERON:0001009(circulatory system),UBERON:0001016(nervous system),UBERON:0001033(gustatory system),UBERON:0001434(skeletal system),UBERON:0002204(musculoskeletal system),UBERON:0002294(biliary system),UBERON:0002330(exocrine system),UBERON:0002390(hematopoietic system),UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)



Children

part of:UBERON:0000016 (endocrine pancreas),UBERON:0001132 (parathyroid gland),UBERON:0001264 (pancreas),UBERON:0002046 (thyroid gland),UBERON:0002107 (liver),UBERON:0002368 (endocrine gland),UBERON:0002369 (adrenal gland),UBERON:0002370 (thymus),UBERON:0003091 (thyroid primordium),UBERON:0010134 (secretory circumventricular organ)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000949 (endocrine system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.77e-35FFCP PHASE1:Hg19::chr8:144417558..144417572,-#_4e1af9ea100fb90503e6bd60b619dbd0p7@TOP1MT
4.77e-35FFCP PHASE2:Hg19::chr8:144417558..144417572,-#_4e1af9ea100fb90503e6bd60b619dbd0p7@TOP1MT
4.77e-35FFCP PHASE2:Hg19::chr2:21233797..21233804,-#_4e1af9ea100fb90503e6bd60b619dbd0p58@APOB
4.77e-35FFCP PHASE1:Hg19::chr2:21233797..21233804,-#_4e1af9ea100fb90503e6bd60b619dbd0p58@APOB
1.58e-34FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_0116ca72d9bb8bd55b47bd3fc1ff575cp5@NR1H4
1.58e-34FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_0116ca72d9bb8bd55b47bd3fc1ff575cp5@NR1H4
6.71e-33FFCP PHASE1:Hg19::chr4:74283297..74283332,-#_9e754fe472369d14001ac11d4a84b033p@chr4:74283297..74283332, -
6.71e-33FFCP PHASE2:Hg19::chr4:74283297..74283332,-#_9e754fe472369d14001ac11d4a84b033p@chr4:74283297..74283332, -
6.48e-32FFCP PHASE1:Hg19::chrX:153769426..153769436,+#_0e33df4bdf32d7e7ea14361ffbda3c6dp18@IKBKG
6.48e-32FFCP PHASE2:Hg19::chrX:153769426..153769436,+#_0e33df4bdf32d7e7ea14361ffbda3c6dp18@IKBKG
8.07e-32FFCP PHASE2:Hg19::chr10:7745167..7745178,+#_599bd513fcbbab91054c2b19793b27a5p3@ITIH2
8.07e-32FFCP PHASE1:Hg19::chr10:7745167..7745178,+#_599bd513fcbbab91054c2b19793b27a5p3@ITIH2
1.08e-31FFCP PHASE2:Hg19::chr2:97216132..97216143,+#_04c5791049a7bf7b3cc3ba40cb05bcebp@chr2:97216132..97216143, +
1.08e-31FFCP PHASE1:Hg19::chr2:97216132..97216143,+#_04c5791049a7bf7b3cc3ba40cb05bcebp@chr2:97216132..97216143, +
1.16e-31FFCP PHASE1:Hg19::chr4:74283279..74283295,-#_339b488f87489a28d51fb367d1db5754p@chr4:74283279..74283295, -
1.16e-31FFCP PHASE2:Hg19::chr4:74283279..74283295,-#_339b488f87489a28d51fb367d1db5754p@chr4:74283279..74283295, -
4.36e-31FFCP PHASE2:Hg19::chr2:21258509..21258518,-#_08fe02fb0288ed8026860a393dffa197p@chr2:21258509..21258518, -
4.36e-31FFCP PHASE1:Hg19::chr2:21228233..21228242,-#_08fe02fb0288ed8026860a393dffa197p56@APOB
4.36e-31FFCP PHASE1:Hg19::chr2:21239379..21239390,-#_08fe02fb0288ed8026860a393dffa197p@chr2:21239379..21239390, -
4.36e-31FFCP PHASE1:Hg19::chr20:10349456..10349475,-#_08fe02fb0288ed8026860a393dffa197p1@ENST00000421143
4.36e-31FFCP PHASE2:Hg19::chr20:22566089..22566097,-#_08fe02fb0288ed8026860a393dffa197p6@FOXA2
4.36e-31FFCP PHASE2:Hg19::chr10:82049381..82049384,-#_08fe02fb0288ed8026860a393dffa197p9@MAT1A
4.36e-31FFCP PHASE1:Hg19::chr10:82049381..82049384,-#_08fe02fb0288ed8026860a393dffa197p9@MAT1A
4.36e-31FFCP PHASE2:Hg19::chr2:21239379..21239390,-#_08fe02fb0288ed8026860a393dffa197p@chr2:21239379..21239390, -
4.36e-31FFCP PHASE2:Hg19::chr2:21228233..21228242,-#_08fe02fb0288ed8026860a393dffa197p56@APOB
4.36e-31FFCP PHASE1:Hg19::chr20:22566089..22566097,-#_08fe02fb0288ed8026860a393dffa197p6@FOXA2
4.36e-31FFCP PHASE2:Hg19::chr20:10349456..10349475,-#_08fe02fb0288ed8026860a393dffa197p1@ENST00000421143
4.36e-31FFCP PHASE1:Hg19::chr2:21258509..21258518,-#_08fe02fb0288ed8026860a393dffa197p@chr2:21258509..21258518, -
4.73e-31FFCP PHASE1:Hg19::chr1:230846000..230846009,-#_dfaf51dd70004fe553bc57aa1668dee8p@chr1:230846000..230846009, -
4.73e-31FFCP PHASE2:Hg19::chr1:230846000..230846009,-#_dfaf51dd70004fe553bc57aa1668dee8p@chr1:230846000..230846009, -
4.73e-31FFCP PHASE1:Hg19::chr14:94844853..94844862,-#_dfaf51dd70004fe553bc57aa1668dee8p35@SERPINA1
4.73e-31FFCP PHASE2:Hg19::chr14:94844853..94844862,-#_dfaf51dd70004fe553bc57aa1668dee8p35@SERPINA1
6.99e-31FFCP PHASE1:Hg19::chr2:44066386..44066398,-#_ed2964a8e3d391a95f94af9dfa360aebp6@ABCG5
6.99e-31FFCP PHASE1:Hg19::chr2:20793103..20793113,-#_ed2964a8e3d391a95f94af9dfa360aebp@chr2:20793103..20793113, -
6.99e-31FFCP PHASE2:Hg19::chr2:44066386..44066398,-#_ed2964a8e3d391a95f94af9dfa360aebp6@ABCG5
6.99e-31FFCP PHASE2:Hg19::chr2:21230675..21230682,-#_ed2964a8e3d391a95f94af9dfa360aebp51@APOB
6.99e-31FFCP PHASE2:Hg19::chr2:20793103..20793113,-#_ed2964a8e3d391a95f94af9dfa360aebp@chr2:20793103..20793113, -
6.99e-31FFCP PHASE2:Hg19::chr2:21234502..21234510,-#_ed2964a8e3d391a95f94af9dfa360aebp43@APOB
6.99e-31FFCP PHASE1:Hg19::chr2:21232865..21232870,-#_ed2964a8e3d391a95f94af9dfa360aebp10@BC172787
6.99e-31FFCP PHASE1:Hg19::chr12:57828432..57828442,+#_ed2964a8e3d391a95f94af9dfa360aebp7@INHBC
6.99e-31FFCP PHASE2:Hg19::chr2:21231676..21231681,-#_ed2964a8e3d391a95f94af9dfa360aebp75@APOB
6.99e-31FFCP PHASE2:Hg19::chr17:7082861..7082882,-#_ed2964a8e3d391a95f94af9dfa360aebp9@ASGR1
6.99e-31FFCP PHASE2:Hg19::chr2:21232865..21232870,-#_ed2964a8e3d391a95f94af9dfa360aebp10@BC172787
6.99e-31FFCP PHASE1:Hg19::chr17:7082861..7082882,-#_ed2964a8e3d391a95f94af9dfa360aebp9@ASGR1
6.99e-31FFCP PHASE1:Hg19::chr2:21234502..21234510,-#_ed2964a8e3d391a95f94af9dfa360aebp43@APOB
6.99e-31FFCP PHASE2:Hg19::chr2:21256369..21256378,-#_ed2964a8e3d391a95f94af9dfa360aebp@chr2:21256369..21256378, -
6.99e-31FFCP PHASE1:Hg19::chr10:7763609..7763619,+#_ed2964a8e3d391a95f94af9dfa360aebp@chr10:7763609..7763619, +
6.99e-31FFCP PHASE1:Hg19::chr2:21231676..21231681,-#_ed2964a8e3d391a95f94af9dfa360aebp75@APOB
6.99e-31FFCP PHASE2:Hg19::chr10:7763609..7763619,+#_ed2964a8e3d391a95f94af9dfa360aebp@chr10:7763609..7763619, +
6.99e-31FFCP PHASE1:Hg19::chr2:21230675..21230682,-#_ed2964a8e3d391a95f94af9dfa360aebp51@APOB
6.99e-31FFCP PHASE1:Hg19::chr2:21256369..21256378,-#_ed2964a8e3d391a95f94af9dfa360aebp@chr2:21256369..21256378, -
6.99e-31FFCP PHASE2:Hg19::chr12:57828432..57828442,+#_ed2964a8e3d391a95f94af9dfa360aebp7@INHBC
3.23e-29FFCP PHASE2:Hg19::chr17:7082560..7082572,-#_8c5ee222fc125a44788bf3da3693d031p4@ASGR1
3.23e-29FFCP PHASE1:Hg19::chr17:7082560..7082572,-#_8c5ee222fc125a44788bf3da3693d031p4@ASGR1
3.45e-29FFCP PHASE1:Hg19::chr10:72083665..72083701,-#_53a29e6fbd261e50e47b95ebe38e3c8bp2@LRRC20
3.45e-29FFCP PHASE2:Hg19::chr10:72083665..72083701,-#_53a29e6fbd261e50e47b95ebe38e3c8bp2@LRRC20
4.08e-29FFCP PHASE1:Hg19::chr4:74279324..74279330,+#_eec79fe38632195aac90bbbe450713a9p35@ALB
4.08e-29FFCP PHASE2:Hg19::chr4:74279324..74279330,+#_eec79fe38632195aac90bbbe450713a9p35@ALB
4.22e-29FFCP PHASE1:Hg19::chr1:11107289..11107304,-#_4e931f9d2313cc1e8769507c268e707cp1@MASP2
4.22e-29FFCP PHASE2:Hg19::chr9:116838918..116838930,-#_4e931f9d2313cc1e8769507c268e707cp@chr9:116838918..116838930, -
4.22e-29FFCP PHASE1:Hg19::chr9:116838918..116838930,-#_4e931f9d2313cc1e8769507c268e707cp@chr9:116838918..116838930, -
4.22e-29FFCP PHASE2:Hg19::chr1:11107289..11107304,-#_4e931f9d2313cc1e8769507c268e707cp1@MASP2
4.36e-29FFCP PHASE2:Hg19::chr4:74283826..74283880,+#_428838738a8384fe8119d22081ee8c2fp12@ALB
4.36e-29FFCP PHASE1:Hg19::chr4:74283826..74283880,+#_428838738a8384fe8119d22081ee8c2fp12@ALB
4.51e-29FFCP PHASE1:Hg19::chr4:74283884..74283918,+#_55feb19e89822a0209b0d03d781166afp21@ALB
4.51e-29FFCP PHASE2:Hg19::chr4:74283884..74283918,+#_55feb19e89822a0209b0d03d781166afp21@ALB
4.67e-29FFCP PHASE2:Hg19::chr3:197300199..197300219,-#_4aa993241853d3981449979365688955p2@BDH1
4.67e-29FFCP PHASE2:Hg19::chr4:74276031..74276091,+#_4aa993241853d3981449979365688955p9@ALB
4.67e-29FFCP PHASE1:Hg19::chr4:74285304..74285336,+#_4aa993241853d3981449979365688955p22@ALB
4.67e-29FFCP PHASE2:Hg19::chr4:74274398..74274425,+#_4aa993241853d3981449979365688955p14@ALB
4.67e-29FFCP PHASE2:Hg19::chr10:82049424..82049425,-#_4aa993241853d3981449979365688955p7@MAT1A
4.67e-29FFCP PHASE1:Hg19::chr4:74279302..74279318,+#_4aa993241853d3981449979365688955p17@ALB
4.67e-29FFCP PHASE1:Hg19::chr4:74276031..74276091,+#_4aa993241853d3981449979365688955p9@ALB
4.67e-29FFCP PHASE2:Hg19::chr4:74285304..74285336,+#_4aa993241853d3981449979365688955p22@ALB
4.67e-29FFCP PHASE2:Hg19::chr4:74279302..74279318,+#_4aa993241853d3981449979365688955p17@ALB
4.67e-29FFCP PHASE1:Hg19::chr10:82049424..82049425,-#_4aa993241853d3981449979365688955p7@MAT1A
4.67e-29FFCP PHASE1:Hg19::chr3:197300199..197300219,-#_4aa993241853d3981449979365688955p2@BDH1
4.67e-29FFCP PHASE1:Hg19::chr4:74274398..74274425,+#_4aa993241853d3981449979365688955p14@ALB
4.82e-29FFCP PHASE2:Hg19::chr4:155528001..155528060,-#_f1ee703b48d62415385336b1e1de8cafp@chr4:155528001..155528060, -
4.82e-29FFCP PHASE2:Hg19::chr19:45430057..45430062,+#_f1ee703b48d62415385336b1e1de8cafp1@APOC1P1
4.82e-29FFCP PHASE1:Hg19::chr9:116838988..116838999,-#_f1ee703b48d62415385336b1e1de8cafp@chr9:116838988..116838999, -
4.82e-29FFCP PHASE1:Hg19::chr19:45430057..45430062,+#_f1ee703b48d62415385336b1e1de8cafp1@APOC1P1
4.82e-29FFCP PHASE2:Hg19::chr9:116838988..116838999,-#_f1ee703b48d62415385336b1e1de8cafp@chr9:116838988..116838999, -
4.82e-29FFCP PHASE1:Hg19::chr4:155528001..155528060,-#_f1ee703b48d62415385336b1e1de8cafp@chr4:155528001..155528060, -
4.99e-29FFCP PHASE1:Hg19::chr4:74284006..74284034,-#_b813b3662575496a586b2fed932358cfp@chr4:74284006..74284034, -
4.99e-29FFCP PHASE2:Hg19::chr4:74284006..74284034,-#_b813b3662575496a586b2fed932358cfp@chr4:74284006..74284034, -
5.16e-29FFCP PHASE1:Hg19::chr11:116662593..116662620,-#_ff6e672a374453cd0e84d5675c9135c2p1@APOA5
5.16e-29FFCP PHASE1:Hg19::chr17:7017634..7017649,-#_ff6e672a374453cd0e84d5675c9135c2p7@ASGR2
5.16e-29FFCP PHASE2:Hg19::chr11:116662593..116662620,-#_ff6e672a374453cd0e84d5675c9135c2p1@APOA5
5.16e-29FFCP PHASE2:Hg19::chr17:7017634..7017649,-#_ff6e672a374453cd0e84d5675c9135c2p7@ASGR2
5.33e-29FFCP PHASE2:Hg19::chr9:111648142..111648157,-#_bb872a632e9616ebc109fc8eb9757487p@chr9:111648142..111648157, -
5.33e-29FFCP PHASE1:Hg19::chr9:111648142..111648157,-#_bb872a632e9616ebc109fc8eb9757487p@chr9:111648142..111648157, -
7.47e-29FFCP PHASE1:Hg19::chr12:100867695..100867706,+#_4668adf4c08fef98592c9d8467ba49ddp6@NR1H4
7.47e-29FFCP PHASE2:Hg19::chr12:100867695..100867706,+#_4668adf4c08fef98592c9d8467ba49ddp6@NR1H4
2.07e-28FFCP PHASE2:Hg19::chr18:21693351..21693370,+#_2ce96f6aac8c077df88ec20b9428e6d4p13@TTC39C
2.07e-28FFCP PHASE1:Hg19::chr18:21693351..21693370,+#_2ce96f6aac8c077df88ec20b9428e6d4p13@TTC39C
2.26e-28FFCP PHASE1:Hg19::chr6:8652489..8652515,+#_77f85dce27c9af466c727ee2d4ae090ap1@HULC
2.26e-28FFCP PHASE2:Hg19::chr6:8652489..8652515,+#_77f85dce27c9af466c727ee2d4ae090ap1@HULC
6.47e-28FFCP PHASE1:Hg19::chr2:21237351..21237366,-#_9346099ee781b9435c54ffc4b7f33065p@chr2:21237351..21237366, -
6.47e-28FFCP PHASE2:Hg19::chr2:21237351..21237366,-#_9346099ee781b9435c54ffc4b7f33065p@chr2:21237351..21237366, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0000949&oldid=1832516"