FFCP PHASE1:Hg19::chr12:57623876..57623891,+
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Short description: | p5@SHMT2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SHMT2_5end |
Coexpression cluster: | C2221_Mesenchymal_Fibroblast_Keratocytes_Keratinocyte_Osteoblast_mesenchymal_Hepatocyte |
Association with transcript: | 0bp_to_ENST00000557348_5end |
EntrezGene: | SHMT2 |
HGNC: | 10852 |
UniProt: | G3V2Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@SHMT2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 3.05e-14 | 76 |
smooth muscle cell | 9.59e-09 | 43 |
smooth muscle myoblast | 9.59e-09 | 43 |
somatic stem cell | 1.43e-08 | 433 |
vascular associated smooth muscle cell | 1.49e-08 | 32 |
multi fate stem cell | 1.57e-08 | 427 |
stem cell | 9.99e-08 | 441 |
muscle precursor cell | 6.19e-07 | 58 |
myoblast | 6.19e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.19e-07 | 58 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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artery | 4.36e-07 | 42 |
arterial blood vessel | 4.36e-07 | 42 |
arterial system | 4.36e-07 | 42 |
trunk | 7.54e-07 | 199 |
Showing 1 to 4 of 4 entries
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