FFCP PHASE2:Hg19::chr9:126774058..126774081,+
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Short description: | p3@LHX2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LHX2_5end |
Coexpression cluster: | C1198_Neural_parietal_occipital_Astrocyte_brain_duodenum_temporal |
Association with transcript: | 169bp_to_ENST00000373615, NM_004789, uc004boe.1, uc010mwi.1_5end |
EntrezGene: | 9355 |
HGNC: | 6594 |
UniProt: | P50458B3KNJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@LHX2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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astrocyte of the cerebral cortex | 2.56e-09 | 3 |
retinal pigment epithelial cell | 6.29e-09 | 3 |
neuronal stem cell | 1.06e-08 | 8 |
neural cell | 6.58e-08 | 25 |
ciliated cell | 7.61e-08 | 3 |
ciliated epithelial cell | 7.61e-08 | 3 |
multi-ciliated epithelial cell | 7.61e-08 | 3 |
non-pigmented ciliary epithelial cell | 7.61e-08 | 3 |
visual pigment cell | 9.15e-07 | 4 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
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cerebral hemisphere | 7.60e-74 | 32 |
telencephalon | 1.70e-73 | 34 |
pre-chordal neural plate | 1.89e-73 | 61 |
regional part of telencephalon | 3.96e-69 | 32 |
regional part of forebrain | 4.02e-67 | 41 |
forebrain | 4.02e-67 | 41 |
anterior neural tube | 4.02e-67 | 41 |
future forebrain | 4.02e-67 | 41 |
brain grey matter | 1.25e-64 | 34 |
gray matter | 1.25e-64 | 34 |
Showing 1 to 10 of 82 entries