FFCP PHASE1:Mm9::chr3:138738142..138738217,-
From FANTOM5_SSTAR
Short description: | p1@Rap1gds1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rap1gds1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000029796, ENSMUST00000098574, NM_001040690, NM_145544, uc008rnr.1, uc008rns.1, uc008rnt.1, uc008rnu.1, uc008rnv.1, uc008rnw.1, uc008rnx.1_5end |
EntrezGene: | Rap1gds1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@Rap1gds1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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structure with developmental contribution from neural crest | 2.71e-13 | 92 |
regional part of nervous system | 1.44e-12 | 54 |
nervous system | 2.40e-12 | 75 |
gray matter | 4.21e-12 | 34 |
central nervous system | 7.22e-12 | 73 |
ectoderm-derived structure | 1.38e-11 | 95 |
ectoderm | 1.38e-11 | 95 |
presumptive ectoderm | 1.38e-11 | 95 |
neural tube | 2.16e-11 | 52 |
neural rod | 2.16e-11 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.