FFCP PHASE1:Hg19::chr11:2159658..2159696,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5466 | |||
|TSSclassifier=strong | |||
|UniProt=P01344 | |||
|association_with_transcript=-27bp_to_AK126688_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_28_at_IGF2_5end | |||
|id=chr11:2159658..2159696,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.71e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.38e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.79e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.85e-16!115;UBERON:0000481!3.90e-13!347;UBERON:0004119!1.07e-11!169;UBERON:0000925!1.07e-11!169;UBERON:0006595!1.07e-11!169;UBERON:0005631!1.23e-10!14;UBERON:0000158!1.23e-10!14;UBERON:0000468!2.18e-10!659;UBERON:0000119!6.60e-10!312;UBERON:0000475!1.99e-09!365;UBERON:0000477!2.52e-09!286;UBERON:0000483!2.69e-09!309;UBERON:0000922!2.27e-08!612;UBERON:0001008!8.74e-08!45;UBERON:0000062!9.97e-08!511;UBERON:0000467!1.11e-07!625;UBERON:0000480!1.45e-07!626;UBERON:0002050!1.69e-07!605;UBERON:0005423!1.69e-07!605;UBERON:0005256!1.83e-07!143;UBERON:0001007!1.83e-07!155;UBERON:0001555!1.83e-07!155;UBERON:0007026!1.83e-07!155;UBERON:0004111!2.05e-07!241;UBERON:0000923!2.99e-07!604;UBERON:0005291!2.99e-07!604;UBERON:0006598!2.99e-07!604;UBERON:0002532!2.99e-07!604;UBERON:0006554!3.03e-07!44;UBERON:0003124!3.81e-07!7;UBERON:0002100!4.35e-07!216;UBERON:0000478!6.41e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.19e-11;24!UBERON:0005631;4.30e-11;10!UBERON:0000158;4.30e-11;10!UBERON:0000077;7.00e-08;27!UBERON:0000305;2.06e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.62e-16,14;UBERON:0000158,9.62e-16,14;UBERON:0004119,1.97e-14,160;UBERON:0000925,1.97e-14,160;UBERON:0006595,1.97e-14,160;UBERON:0000478,9.76e-12,24;UBERON:0001008,2.02e-10,48;UBERON:0003124,4.78e-10,7;UBERON:0006554,1.22e-09,47;UBERON:0003064,2.42e-09,28;UBERON:0003104,7.76e-09,160;UBERON:0009142,7.76e-09,160;UBERON:0004921,1.65e-08,118;UBERON:0001007,4.84e-08,145;UBERON:0001555,4.84e-08,145;UBERON:0007026,4.84e-08,145;UBERON:0007023,1.19e-07,114;UBERON:0001046,1.37e-07,19;UBERON:0000305,1.94e-07,7;UBERON:0000162,4.35e-07,14;UBERON:0001353,4.35e-07,14;UBERON:0000163,4.35e-07,14;UBERON:0006866,4.35e-07,14;UBERON:0000164,4.35e-07,14;UBERON:0000931,4.35e-07,14;UBERON:0000077,4.47e-07,29 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.140954404095971,0,0.893922188854576,0,0,0,0,0.982935746006035,0.697801167972428,7.42700665242586,10.8144461073666,1.48519623552056,2.65117900582333,0,0,0,0,0.61560529038394,2.85600967741954,2.82109249330279,0,0,0.125542639594803,0,0,0,0,0,1.39334510984468,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0,0.589405839739707,0,0,0,0,0,0,0,0,0,1.72046919021225,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0,1.00416183829401,0,0,0,0,1.62028389576352,0,0.22452937262617,0.112611480483322,1.53316637465883,0.949265659568129,0.732806975721629,0,0,1.74437620857014,0,0,0.132409180813219,0,0,1.12135520028461,0,0.49333509683432,0.622422070799533,0.134710672069688,0,3.93529311876822,7.49028701823999,0.937285727335186,0,0,0,0,0,0,0,0.491337269247072,0.103325781175765,3.56400857184616,5.43987244412825,0,0,0.841680569770331,0.875829639103749,0.277064115484183,4.82875382968922,0.30648779579902,1.35214253015937,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0.368199594569197,0.484938170456436,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0,0,0.813357600086629,0.518305275076852,0.252320850875628,0,0,0,0,11.1448302727675,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,5.88034845542168,0,0,0.590789906681404,0,9.47010976781974,0,0,0,0,0.833296006426766,0.651616610620649,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0.560655421726804,5.23152082599936,0.36669142910475,0,0,0,5.85063856486715,0,0.514414748524284,1.41849132023278,0.532844358032199,12.8680194292333,26.5884586641807,1.64648067356154,0,8.88479871856365,0,0,0,0,0,0,0,0,0,0,1.01346914667305,1.43833425785268,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,6.99341502799097,1.00034104211935,4.88277042659524,2.28767947683888,2.3195768543631,1.57702415033935,2.45996971484698,0.300946099727719,11.3703752027992,4.1389228517002,0,0,0,24.0835423679171,22.9906093953273,0,0,0,5.75942385747893,11.6504807657348,14.212343786495,0,1.53461973288062,0,0,1.02341449813341,0,1.48418066444991,0,0,0,1.03850885836724,0,22.9632954224082,1.60405176242628,0.184161977871793,3.55924789310281,1.45672934405374,6.81846957789005,0.451199612907412,0.847168708148562,0,0,0.211103257785751,1.13733384070897,0,2.37507507712353,3.08454505380579,4.87703587578935,9.53210570324221,0,0,0,1.09629938322967,0,0,0,0,5.77029665227245,0.0915694648183434,0.082509499920588,0.574265537996172,0,0,0.870036464629098,0,0.307007349452259,0.551346289938122,0,0.725083469571143,0.426133137080504,4.62966585363034,3.14041339185858,3.2672311452068,1.27612712494584,2.4277867405332,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,0,0.744316738719335,3.16379424718726,3.62197368455267,1.535386747868,1.71175595213568,0,0,8.27413304883248,3.0199073270966,1.7671860351853,0,0,0,7.80213982543345,0,0,6.6884956589913,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.430234056612155,3.92996164052485,0,0,0,0,0.379473173765715,0.699869440489966,0.384888450902048,0,1.08890984861323,3.76575203107117,14.2066772981506,1.68471475667626,9.31203322427019,16.769808215108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2555725490326,0,0,0.284136146806413,25.0681708974575,34.4479029765861,34.7091593372132,0,0.422008249231538,0,0,0,0.796991953004279,1.10513566212459,0.251932747854276,0,0,0.311039587661807,0,0,0,4.04437963111428,0,0,0,1.02044907978036,0,0,0,2.17499872630438,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0.663475559587348,0.295547618953547,2.19385397153973,0,0,4.54006525172403,0,1.61394733071642,0,0,32.8571194523877,7.0530146919434,156.712224149479,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,2.29989667708682,1.22206028986725,0,0,0,0.606610196826093,11.236087062183,0,0,0,0,1.18375320854817,1.20990716048664,0.30607276163049,24.4532063162248,0,0.103688191397247,0,0,0.627865836814451,0,0,0,0,0,0,8.56160674385948,0.171986032471617,0,0,0,2.61870344518732,0,9.49119111278236,0,0,0.316553979779393,0,0,1.70762395791482,7.19314594495669,0,0,32.2598595980493,0,0,0,0,0.104602846312333,0.203996435272644,0,0,0.136905378891993,0,0,0,4.46851842035607,5.04152932825704,2.87149209830726,0.599037001496973,0.858452096273142,4.24025769139558,4.36692571163721,0.720599767084807,0,10.4781632468607,11.867883606888,11.5934095429198,10.1380305960191,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.788057072991982,2.36045646607491,1.05600336519407,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,1.69968137280189,0.879313402068495,21.2011022259554,0.258565912723101,0.13223260174269,0,0,1.06787412567695,5.65935498358797,0,0,0,0,0,0.544017803369474,1.7548292581589,0,0.655745261419609,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.887432412294818,0.931446044120752,0,0.624902039810533,0,0,6.35217713185063,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0.899606224327209,0,0,0,1.04349012362347,0,0,0.406870733204662,0,0,0,1.59238355479446,8.00055529326307,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,5.10764358210152,0,0.139879507719444,0.622077260032973,0,0,0,0.327628914576042,0,0,0,0,0,0,0,1.76337971845342,7.96238241118321,0.321146125482298,0,0.319267718114302,0.205116364240755,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0.235939446695481,0,0,0,0,1.5913297769302,13.16180746112,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.380494861163441,0,0.548257766857182,2.48105589194647,0,0.255524855279191,1.07140367175657,1.3451348888753,3.03482802118316,2.04895972216168,10.8216891598419,0,0,0.40781839786099,0.328863867814245,0,0.111231401892069,5.5730095923865,0,2.80272163313789,0,0,0,6.93322478513567,0,0,13.3870869672986,7.21540228257228,0,0,0,0,0,0,1.27016115057279,0.4582137370881,0,0,0,0,1.46301509978723,1.94228651156368,5.64645437709359,22.0364741954258,8.25708688200537,0,5.76957247967968,0,0,0,0,0.848915739187391,2.62271472604749,0,1.47088993052343,0.471353094203252,3.14093547383912,1.48523200163543,1.2679671827502,0.169927114687817,0.939839179798536,1.99819452718089,0,0,0.352894871715692,0,2.19100916473955,0,0.860037498908708,2.0510303085114,0.0679914901909147,0.436350690340377,6.87734892670021,0,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,3.25848402338429,1.60778478093707,0,0.103432995861895,3.83821167421766,3.09483760902862,0.258355639344024,1.05527014302958,0,0.763765899337979,2.02117188958219,5.22520194952707,17.1116650542641,1.6164492723501,2.79716601031438,6.65320713092027,3.01192093860606,0,1.9307228228694,5.56916253060839,14.0784565442073,3.54500188130313,2.03448089157869,11.9836219353392,3.01910690386539,0 | |||
|short_description=p28@IGF2 | |||
}} |
Revision as of 06:09, 11 January 2014
Short description: | p28@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -27bp_to_AK126688_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.38e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.62e-16 | 14 |
membranous layer | 9.62e-16 | 14 |
endoderm-derived structure | 1.97e-14 | 160 |
endoderm | 1.97e-14 | 160 |
presumptive endoderm | 1.97e-14 | 160 |
extraembryonic structure | 9.76e-12 | 24 |
renal system | 2.02e-10 | 48 |
chorion | 4.78e-10 | 7 |
urinary system structure | 1.22e-09 | 47 |
intermediate mesoderm | 2.42e-09 | 28 |
mesenchyme | 7.76e-09 | 160 |
entire embryonic mesenchyme | 7.76e-09 | 160 |
subdivision of digestive tract | 1.65e-08 | 118 |
digestive system | 4.84e-08 | 145 |
digestive tract | 4.84e-08 | 145 |
primitive gut | 4.84e-08 | 145 |
adult organism | 1.19e-07 | 114 |
hindgut | 1.37e-07 | 19 |
amnion | 1.94e-07 | 7 |
cloaca | 4.35e-07 | 14 |
anal region | 4.35e-07 | 14 |
embryonic cloaca | 4.35e-07 | 14 |
terminal part of digestive tract | 4.35e-07 | 14 |
primitive urogenital sinus | 4.35e-07 | 14 |
proctodeum | 4.35e-07 | 14 |
mixed endoderm/mesoderm-derived structure | 4.47e-07 | 29 |