FFCP PHASE1:Hg19::chr12:25204585..25204605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:25204585..25204605,- | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_at_chr12:25204585..25204605,- | |description=CAGE_peak_at_chr12:25204585..25204605,- | ||
|id=chr12:25204585..25204605,- | |id=chr12:25204585..25204605,- | ||
|ontology_enrichment_celltype=CL:0000838!1.50e-27!52;CL:0000542!5.52e-27!53;CL:0000051!5.52e-27!53;CL:0000945!2.56e-20!24;CL:0000826!2.56e-20!24;CL:0000738!3.36e-17!140;CL:0000785!5.51e-17!2;CL:0000955!5.51e-17!2;CL:0000818!5.51e-17!2;CL:0000954!5.51e-17!2;CL:0000816!5.51e-17!2;CL:0000037!4.52e-15!172;CL:0000566!4.52e-15!172;CL:0002087!3.78e-14!119;CL:0000988!4.68e-14!182;CL:0002031!1.80e-13!124;CL:0002032!2.08e-12!165;CL:0000837!2.08e-12!165;CL:0000817!1.22e-11!3;CL:0000810!1.56e-09!1;CL:0000895!1.56e-09!1;CL:0002436!1.56e-09!1;CL:0002427!1.56e-09!1;CL:0002428!1.56e-09!1;CL:0002429!1.56e-09!1;CL:0002433!1.56e-09!1;CL:0002431!1.56e-09!1;CL:0002432!1.56e-09!1;CL:0000946!1.84e-09!1;CL:0000786!1.84e-09!1;CL:0000980!1.84e-09!1;CL:0000819!3.00e-09!1;CL:0000084!7.00e-08!25;CL:0000827!7.00e-08!25;CL:0000791!2.94e-07!18;CL:0000789!2.94e-07!18;CL:0002420!2.94e-07!18;CL:0002419!2.94e-07!18;CL:0000790!2.94e-07!18 | |ontology_enrichment_celltype=CL:0000838!1.50e-27!52;CL:0000542!5.52e-27!53;CL:0000051!5.52e-27!53;CL:0000945!2.56e-20!24;CL:0000826!2.56e-20!24;CL:0000738!3.36e-17!140;CL:0000785!5.51e-17!2;CL:0000955!5.51e-17!2;CL:0000818!5.51e-17!2;CL:0000954!5.51e-17!2;CL:0000816!5.51e-17!2;CL:0000037!4.52e-15!172;CL:0000566!4.52e-15!172;CL:0002087!3.78e-14!119;CL:0000988!4.68e-14!182;CL:0002031!1.80e-13!124;CL:0002032!2.08e-12!165;CL:0000837!2.08e-12!165;CL:0000817!1.22e-11!3;CL:0000810!1.56e-09!1;CL:0000895!1.56e-09!1;CL:0002436!1.56e-09!1;CL:0002427!1.56e-09!1;CL:0002428!1.56e-09!1;CL:0002429!1.56e-09!1;CL:0002433!1.56e-09!1;CL:0002431!1.56e-09!1;CL:0002432!1.56e-09!1;CL:0000946!1.84e-09!1;CL:0000786!1.84e-09!1;CL:0000980!1.84e-09!1;CL:0000819!3.00e-09!1;CL:0000084!7.00e-08!25;CL:0000827!7.00e-08!25;CL:0000791!2.94e-07!18;CL:0000789!2.94e-07!18;CL:0002420!2.94e-07!18;CL:0002419!2.94e-07!18;CL:0000790!2.94e-07!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.50e-28!10;DOID:2531!1.65e-11!51;DOID:0060083!1.65e-11!51;DOID:4960!1.12e-09!1;DOID:0070004!1.12e-09!1;DOID:0060073!3.00e-09!1;DOID:8675!3.00e-09!1;DOID:2355!4.87e-09!1 | |ontology_enrichment_disease=DOID:0060058!1.50e-28!10;DOID:2531!1.65e-11!51;DOID:0060083!1.65e-11!51;DOID:4960!1.12e-09!1;DOID:0070004!1.12e-09!1;DOID:0060073!3.00e-09!1;DOID:8675!3.00e-09!1;DOID:2355!4.87e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.97e-19!4;UBERON:0005058!6.97e-19!4;UBERON:0009113!6.97e-19!4;UBERON:0003295!6.97e-19!4;UBERON:0005562!6.97e-19!4;UBERON:0001042!5.04e-13!10;UBERON:0009145!5.04e-13!10;UBERON:0003351!8.80e-13!6;UBERON:0006562!7.40e-12!11;UBERON:0004177!4.95e-11!7;UBERON:0002372!5.72e-09!1;UBERON:0001961!5.72e-09!1;UBERON:0001744!5.72e-09!1;UBERON:0001735!5.72e-09!1;UBERON:0000974!7.25e-08!10;UBERON:0003408!7.25e-08!10;UBERON:0009722!3.43e-07!11;UBERON:0007690!3.43e-07!11;UBERON:0001557!6.36e-07!19 | |ontology_enrichment_uberon=UBERON:0002370!6.97e-19!4;UBERON:0005058!6.97e-19!4;UBERON:0009113!6.97e-19!4;UBERON:0003295!6.97e-19!4;UBERON:0005562!6.97e-19!4;UBERON:0001042!5.04e-13!10;UBERON:0009145!5.04e-13!10;UBERON:0003351!8.80e-13!6;UBERON:0006562!7.40e-12!11;UBERON:0004177!4.95e-11!7;UBERON:0002372!5.72e-09!1;UBERON:0001961!5.72e-09!1;UBERON:0001744!5.72e-09!1;UBERON:0001735!5.72e-09!1;UBERON:0000974!7.25e-08!10;UBERON:0003408!7.25e-08!10;UBERON:0009722!3.43e-07!11;UBERON:0007690!3.43e-07!11;UBERON:0001557!6.36e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.52e-50;2!UBERON:0005058;4.52e-50;2!UBERON:0009113;4.52e-50;2!UBERON:0004177;5.15e-21;5!UBERON:0005057;5.15e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.14e-26,4;UBERON:0005058,7.14e-26,4;UBERON:0009113,7.14e-26,4;UBERON:0003295,7.14e-26,4;UBERON:0005562,7.14e-26,4;UBERON:0003351,9.07e-18,6;UBERON:0004177,1.91e-15,7;UBERON:0005057,1.91e-15,7;UBERON:0000974,3.02e-11,10;UBERON:0003408,3.02e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0006562,2.37e-10,11;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0008814,7.60e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.309868802321207,0.426507697462265,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782560276832555,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5487785250564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,1.61394257169231,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.309868802321207,0.426507697462265,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782560276832555,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5487785250564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,1.61394257169231,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:25204585..25204605,- | |short_description=p@chr12:25204585..25204605,- | ||
}} | }} |
Latest revision as of 07:44, 24 July 2015
Short description: | p@chr12:25204585..25204605, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:25204585..25204605, - |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.14e-26 | 4 |
hemolymphoid system gland | 7.14e-26 | 4 |
thymic region | 7.14e-26 | 4 |
pharyngeal gland | 7.14e-26 | 4 |
thymus primordium | 7.14e-26 | 4 |
pharyngeal epithelium | 9.07e-18 | 6 |
hemopoietic organ | 1.91e-15 | 7 |
immune organ | 1.91e-15 | 7 |
neck | 3.02e-11 | 10 |
gland of gut | 3.02e-11 | 10 |
chordate pharynx | 3.02e-11 | 10 |
pharyngeal region of foregut | 3.02e-11 | 10 |
pharynx | 2.37e-10 | 11 |
entire pharyngeal arch endoderm | 2.37e-10 | 11 |
early pharyngeal endoderm | 2.37e-10 | 11 |
pharyngeal arch system | 7.60e-07 | 18 |