FFCP PHASE1:Hg19::chr12:8797615..8797621,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:8797615..8797621,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr12:8797615..8797621,- | |description=CAGE_peak_at_chr12:8797615..8797621,- | ||
|id=chr12:8797615..8797621,- | |id=chr12:8797615..8797621,- | ||
|ontology_enrichment_celltype=CL:0000838!2.38e-32!52;CL:0000542!1.26e-31!53;CL:0000051!1.26e-31!53;CL:0000738!4.41e-26!140;CL:0002087!4.54e-26!119;CL:0000791!1.89e-23!18;CL:0000789!1.89e-23!18;CL:0002420!1.89e-23!18;CL:0002419!1.89e-23!18;CL:0000790!1.89e-23!18;CL:0002031!2.84e-21!124;CL:0000037!1.22e-19!172;CL:0000566!1.22e-19!172;CL:0000988!2.09e-19!182;CL:0000084!3.71e-19!25;CL:0000827!3.71e-19!25;CL:0002032!4.82e-18!165;CL:0000837!4.82e-18!165;CL:0000625!2.51e-16!11;CL:0000945!1.46e-13!24;CL:0000826!1.46e-13!24;CL:0000898!7.10e-12!3;CL:0000624!2.85e-10!6;CL:0000815!2.09e-08!2;CL:0000792!2.09e-08!2;CL:0002677!2.09e-08!2;CL:0000785!3.26e-08!2;CL:0000955!3.26e-08!2;CL:0000818!3.26e-08!2;CL:0000954!3.26e-08!2;CL:0000816!3.26e-08!2 | |ontology_enrichment_celltype=CL:0000838!2.38e-32!52;CL:0000542!1.26e-31!53;CL:0000051!1.26e-31!53;CL:0000738!4.41e-26!140;CL:0002087!4.54e-26!119;CL:0000791!1.89e-23!18;CL:0000789!1.89e-23!18;CL:0002420!1.89e-23!18;CL:0002419!1.89e-23!18;CL:0000790!1.89e-23!18;CL:0002031!2.84e-21!124;CL:0000037!1.22e-19!172;CL:0000566!1.22e-19!172;CL:0000988!2.09e-19!182;CL:0000084!3.71e-19!25;CL:0000827!3.71e-19!25;CL:0002032!4.82e-18!165;CL:0000837!4.82e-18!165;CL:0000625!2.51e-16!11;CL:0000945!1.46e-13!24;CL:0000826!1.46e-13!24;CL:0000898!7.10e-12!3;CL:0000624!2.85e-10!6;CL:0000815!2.09e-08!2;CL:0000792!2.09e-08!2;CL:0002677!2.09e-08!2;CL:0000785!3.26e-08!2;CL:0000955!3.26e-08!2;CL:0000818!3.26e-08!2;CL:0000954!3.26e-08!2;CL:0000816!3.26e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000771;4.52e-50;2!CL:0000094;1.07e-13;8!CL:0000081;2.37e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,4.52e-50,2;CL:0000094,1.07e-13,8;CL:0000081,2.37e-10,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!6.73e-09!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.22e-09!4;UBERON:0005058!3.22e-09!4;UBERON:0009113!3.22e-09!4;UBERON:0003295!3.22e-09!4;UBERON:0005562!3.22e-09!4;UBERON:0004177!1.10e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.74e-50;2!UBERON:0005058;2.74e-50;2!UBERON:0009113;2.74e-50;2!UBERON:0004177;4.21e-21;5!UBERON:0005057;4.21e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.56e-26,4;UBERON:0005058,5.56e-26,4;UBERON:0009113,5.56e-26,4;UBERON:0003295,5.56e-26,4;UBERON:0005562,5.56e-26,4;UBERON:0003351,7.67e-18,6;UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000974,2.73e-11,10;UBERON:0003408,2.73e-11,10;UBERON:0001042,2.73e-11,10;UBERON:0009145,2.73e-11,10;UBERON:0006562,2.16e-10,11;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0008814,7.18e-07,18 | |||
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| ||
|short_description=p@chr12:8797615..8797621,- | |short_description=p@chr12:8797615..8797621,- | ||
}} | }} |
Latest revision as of 13:09, 24 July 2015
Short description: | p@chr12:8797615..8797621, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:8797615..8797621, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 4.52e-50 | 2 |
granulocyte | 1.07e-13 | 8 |
blood cell | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.56e-26 | 4 |
hemolymphoid system gland | 5.56e-26 | 4 |
thymic region | 5.56e-26 | 4 |
pharyngeal gland | 5.56e-26 | 4 |
thymus primordium | 5.56e-26 | 4 |
pharyngeal epithelium | 7.67e-18 | 6 |
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
neck | 2.73e-11 | 10 |
gland of gut | 2.73e-11 | 10 |
chordate pharynx | 2.73e-11 | 10 |
pharyngeal region of foregut | 2.73e-11 | 10 |
pharynx | 2.16e-10 | 11 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
pharyngeal arch system | 7.18e-07 | 18 |