FFCP PHASE1:Hg19::chr12:9067527..9067542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:9067527..9067542,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chr12:9067527..9067542,+ | |description=CAGE_peak_at_chr12:9067527..9067542,+ | ||
|id=chr12:9067527..9067542,+ | |id=chr12:9067527..9067542,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.06e-09!5;CL:0000039!7.01e-09!7;CL:0000586!7.01e-09!7 | |ontology_enrichment_celltype=CL:0002322!1.06e-09!5;CL:0000039!7.01e-09!7;CL:0000586!7.01e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.20e-59;5!CL:0000039;6.75e-41;7!CL:0000586;6.75e-41;7!CL:0002321;7.29e-20;15!CL:0000540;1.49e-18;6!CL:0000404;1.49e-18;6!CL:0000148;2.51e-11;10!CL:0000147;3.06e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.80e-59,5;CL:0000039,5.72e-41,7;CL:0000586,5.72e-41,7;CL:0000540,1.37e-18,6;CL:0000031,1.37e-18,6;CL:0000404,1.37e-18,6;CL:0000047,4.23e-14,8;CL:0000148,2.55e-11,10;CL:0000541,2.55e-11,10;CL:0000147,3.10e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.04e-18;10!UBERON:0005564;1.04e-18;10!CL:0000031;1.49e-18;6 | |||
|ontology_enrichment_disease=DOID:3095!5.55e-08!22;DOID:2994!5.55e-08!22 | |ontology_enrichment_disease=DOID:3095!5.55e-08!22;DOID:2994!5.55e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.73e-18;22!DOID:2994;1.73e-18;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.57e-18,22;DOID:2994,1.57e-18,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.03e-08!11;UBERON:0000473!3.84e-07!8 | |ontology_enrichment_uberon=UBERON:0003135!2.03e-08!11;UBERON:0000473!3.84e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.71e-23;8!UBERON:0003135;4.88e-17;11!UBERON:0000922;1.19e-11;49!UBERON:0000991;4.76e-09;21!UBERON:0003101;1.20e-08;22!UBERON:0000079;1.20e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.87e-23,8;UBERON:0003135,5.09e-17,11;UBERON:0000991,4.86e-09,21;UBERON:0009196,4.86e-09,21;UBERON:0009117,4.86e-09,21;UBERON:0005564,4.86e-09,21;UBERON:0004176,1.23e-08,22;UBERON:0003101,1.23e-08,22;UBERON:0000079,1.23e-08,22 | |||
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| ||
|short_description=p@chr12:9067527..9067542,+ | |short_description=p@chr12:9067527..9067542,+ | ||
}} | }} |
Latest revision as of 13:26, 24 July 2015
Short description: | p@chr12:9067527..9067542, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9067527..9067542, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.80e-59 | 5 |
germ line cell | 5.72e-41 | 7 |
germ cell | 5.72e-41 | 7 |
neuron | 1.37e-18 | 6 |
neuroblast | 1.37e-18 | 6 |
electrically signaling cell | 1.37e-18 | 6 |
neuronal stem cell | 4.23e-14 | 8 |
melanocyte | 2.55e-11 | 10 |
melanoblast | 2.55e-11 | 10 |
pigment cell | 3.10e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 2.87e-23 | 8 |
male reproductive organ | 5.09e-17 | 11 |
gonad | 4.86e-09 | 21 |
indifferent external genitalia | 4.86e-09 | 21 |
indifferent gonad | 4.86e-09 | 21 |
gonad primordium | 4.86e-09 | 21 |
external genitalia | 1.23e-08 | 22 |
male organism | 1.23e-08 | 22 |
male reproductive system | 1.23e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.57e-18 | 22 |
germ cell cancer | 1.57e-18 | 22 |