FFCP PHASE1:Hg19::chr14:106733172..106733175,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=20bp_to_AK126233_5end|coexpression_cluster_id=C28|description=CAGE_peak_1_at_AK126233_5end|id=chr14:106733172..106733175,+|ontology_enrichment_celltype=CL:0000623!4.00e-12!3;CL:0000825!4.00e-12!3;CL:0000838!4.16e-12!52;CL:0000542!7.44e-12!53;CL:0000051!7.44e-12!53;CL:0001024!1.80e-10!1;CL:0000945!6.10e-09!24;CL:0000826!6.10e-09!24;CL:0000037!2.00e-07!172;CL:0000566!2.00e-07!172;CL:0002087!6.49e-07!119;CL:0000988!6.89e-07!182;CL:0000738!7.82e-07!140|ontology_enrichment_celltype_v019=CL:0000037;8.10e-41;1!CL:0001024;8.10e-41;1|ontology_enrichment_celltype_v019_2=CL:0001024,9.91e-41,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:9119!4.44e-10!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!5.08e-10!4;UBERON:0005058!5.08e-10!4;UBERON:0009113!5.08e-10!4;UBERON:0003295!5.08e-10!4;UBERON:0005562!5.08e-10!4;UBERON:0002372!1.07e-09!1;UBERON:0001961!1.07e-09!1;UBERON:0001744!1.07e-09!1;UBERON:0001735!1.07e-09!1;UBERON:0000974!1.48e-08!10;UBERON:0001042!1.68e-08!10;UBERON:0009145!1.68e-08!10;UBERON:0006562!9.04e-08!11;UBERON:0003351!5.92e-07!6|ontology_enrichment_uberon_v019=UBERON:0002370;2.86e-79;2!UBERON:0005058;2.86e-79;2!UBERON:0009113;2.86e-79;2!UBERON:0004177;1.57e-32;5!UBERON:0005057;1.57e-32;5!UBERON:0002405;4.74e-14;27!UBERON:0002390;9.02e-10;32!UBERON:0000077;6.92e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-40,4;UBERON:0005058,2.71e-40,4;UBERON:0009113,2.71e-40,4;UBERON:0003295,2.71e-40,4;UBERON:0005562,2.71e-40,4;UBERON:0003351,2.72e-27,6;UBERON:0004177,1.44e-23,7;UBERON:0005057,1.44e-23,7;UBERON:0000974,7.51e-17,10;UBERON:0003408,7.51e-17,10;UBERON:0001042,7.51e-17,10;UBERON:0009145,7.51e-17,10;UBERON:0006562,2.02e-15,11;UBERON:0009722,2.02e-15,11;UBERON:0007690,2.02e-15,11;UBERON:0008814,7.76e-10,18;UBERON:0001557,2.26e-09,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0,0,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889719378972363,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,2.51896748360424,1.1794195716213,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@AK126233}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=20bp_to_AK126233_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_1_at_AK126233_5end | |||
|id=chr14:106733172..106733175,+ | |||
|ontology_enrichment_celltype=CL:0000623!4.00e-12!3;CL:0000825!4.00e-12!3;CL:0000838!4.16e-12!52;CL:0000542!7.44e-12!53;CL:0000051!7.44e-12!53;CL:0001024!1.80e-10!1;CL:0000945!6.10e-09!24;CL:0000826!6.10e-09!24;CL:0000037!2.00e-07!172;CL:0000566!2.00e-07!172;CL:0002087!6.49e-07!119;CL:0000988!6.89e-07!182;CL:0000738!7.82e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000037;8.10e-41;1!CL:0001024;8.10e-41;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,9.91e-41,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:9119!4.44e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.08e-10!4;UBERON:0005058!5.08e-10!4;UBERON:0009113!5.08e-10!4;UBERON:0003295!5.08e-10!4;UBERON:0005562!5.08e-10!4;UBERON:0002372!1.07e-09!1;UBERON:0001961!1.07e-09!1;UBERON:0001744!1.07e-09!1;UBERON:0001735!1.07e-09!1;UBERON:0000974!1.48e-08!10;UBERON:0001042!1.68e-08!10;UBERON:0009145!1.68e-08!10;UBERON:0006562!9.04e-08!11;UBERON:0003351!5.92e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.86e-79;2!UBERON:0005058;2.86e-79;2!UBERON:0009113;2.86e-79;2!UBERON:0004177;1.57e-32;5!UBERON:0005057;1.57e-32;5!UBERON:0002405;4.74e-14;27!UBERON:0002390;9.02e-10;32!UBERON:0000077;6.92e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-40,4;UBERON:0005058,2.71e-40,4;UBERON:0009113,2.71e-40,4;UBERON:0003295,2.71e-40,4;UBERON:0005562,2.71e-40,4;UBERON:0003351,2.72e-27,6;UBERON:0004177,1.44e-23,7;UBERON:0005057,1.44e-23,7;UBERON:0000974,7.51e-17,10;UBERON:0003408,7.51e-17,10;UBERON:0001042,7.51e-17,10;UBERON:0009145,7.51e-17,10;UBERON:0006562,2.02e-15,11;UBERON:0009722,2.02e-15,11;UBERON:0007690,2.02e-15,11;UBERON:0008814,7.76e-10,18;UBERON:0001557,2.26e-09,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0,0,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889719378972363,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,2.51896748360424,1.1794195716213,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@AK126233 | |||
}} |
Revision as of 03:37, 11 September 2013
Short description: | p1@AK126233 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AK126233_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 20bp_to_AK126233_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 9.91e-41 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.71e-40 | 4 |
hemolymphoid system gland | 2.71e-40 | 4 |
thymic region | 2.71e-40 | 4 |
pharyngeal gland | 2.71e-40 | 4 |
thymus primordium | 2.71e-40 | 4 |
pharyngeal epithelium | 2.72e-27 | 6 |
hemopoietic organ | 1.44e-23 | 7 |
immune organ | 1.44e-23 | 7 |
neck | 7.51e-17 | 10 |
gland of gut | 7.51e-17 | 10 |
chordate pharynx | 7.51e-17 | 10 |
pharyngeal region of foregut | 7.51e-17 | 10 |
pharynx | 2.02e-15 | 11 |
entire pharyngeal arch endoderm | 2.02e-15 | 11 |
early pharyngeal endoderm | 2.02e-15 | 11 |
pharyngeal arch system | 7.76e-10 | 18 |
upper respiratory tract | 2.26e-09 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.