FFCP PHASE1:Hg19::chr14:22942273..22942288,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-11bp_to_uc001wec.2_5end|coexpression_cluster_id=C28|description=CAGE_peak_1_at_uc001wec.2_5end|id=chr14:22942273..22942288,+|ontology_enrichment_celltype=CL:0000542!2.89e-21!53;CL:0000051!2.89e-21!53;CL:0000838!5.56e-20!52;CL:0000791!1.66e-15!18;CL:0000789!1.66e-15!18;CL:0002420!1.66e-15!18;CL:0002419!1.66e-15!18;CL:0000790!1.66e-15!18;CL:0000625!5.11e-14!11;CL:0000084!4.41e-10!25;CL:0000827!4.41e-10!25;CL:0000037!5.08e-09!172;CL:0000566!5.08e-09!172;CL:0002087!5.25e-09!119;CL:0000738!1.16e-08!140;CL:0000988!6.87e-08!182;CL:0000945!7.38e-08!24;CL:0000826!7.38e-08!24;CL:0002032!1.70e-07!165;CL:0000837!1.70e-07!165|ontology_enrichment_celltype_v019=CL:0000623;4.35e-09;3!CL:0000946;4.88e-08;1!CL:0000786;4.88e-08;1!CL:0000817;9.43e-08;1|ontology_enrichment_celltype_v019_2=CL:0000542,2.58e-10,53;CL:0000051,2.58e-10,53;CL:0000817,9.54e-10,3;CL:0000623,4.93e-09,3;CL:0000825,4.93e-09,3;CL:0000838,1.80e-08,52;CL:0000946,4.89e-08,1;CL:0000786,4.89e-08,1;CL:0000980,4.89e-08,1|ontology_enrichment_development_v019=UBERON:0006215;7.72e-20;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:12603;5.22e-08;1|ontology_enrichment_disease_v019_2=DOID:12603,5.22e-08,1|ontology_enrichment_uberon=UBERON:0000178!8.64e-10!15;UBERON:0000179!8.64e-10!15;UBERON:0000463!8.64e-10!15;UBERON:0002680!1.78e-08!9;UBERON:0001895!1.78e-08!9;UBERON:0010092!1.78e-08!9;UBERON:0007023!2.24e-08!115;UBERON:0002037!1.29e-07!6;UBERON:0006215!1.29e-07!6;UBERON:0004733!1.47e-07!12;UBERON:0002028!1.47e-07!12;UBERON:0007277!1.47e-07!12;UBERON:0004732!7.40e-07!13|ontology_enrichment_uberon_v019=UBERON:0002370;1.82e-14;2!UBERON:0005058;1.82e-14;2!UBERON:0009113;1.82e-14;2!UBERON:0004177;2.59e-12;5!UBERON:0005057;2.59e-12;5!UBERON:0002037;3.48e-10;6!UBERON:0002680;6.18e-07;9!UBERON:0001895;6.18e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.17e-10,6;UBERON:0006215,3.17e-10,6;UBERON:0004177,7.67e-09,7;UBERON:0005057,7.67e-09,7;UBERON:0002370,1.19e-07,4;UBERON:0005058,1.19e-07,4;UBERON:0009113,1.19e-07,4;UBERON:0003295,1.19e-07,4;UBERON:0005562,1.19e-07,4;UBERON:0002680,5.82e-07,9;UBERON:0001895,5.82e-07,9;UBERON:0010092,5.82e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.940364164434263,0,0.136874425072884,0.125542639594803,4.81404456212093,3.44822475689772,4.40780375356604,1.18009283054671,0,0.154816123316076,0,0,0,0.232401601740905,0,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0.790152254325231,0.196709770113833,0,0,0.167186495390678,0.651844533267181,0.473447805734733,0,0.222820913770347,0.883817722424512,0,1.35401931882508,0.512365278902701,0.130059347559878,0.328875809207352,0.276350017785848,0.869409257205157,0.296573126324121,0.802622484269139,1.04535523804977,0,0.383220493601921,0.34362744548263,1.26509846009751,0.637130828648193,0.651083453856419,0.950452044448374,0.451725357233318,0.639933055772092,1.24930726552346,0.236777252044017,2.46338399076314,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.862510299438069,1.15508732651774,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0.411362273086194,1.29694662238543,1.08006287447623,2.37937552888281,1.70918513803957,0,0,5.57409525377156,2.8853842595289,0,0,0,0.957526850661834,2.75175657541048,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,2.53350489753592,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,1.3269511191747,4.13766666534966,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_uc001wec.2_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_1_at_uc001wec.2_5end | |||
|id=chr14:22942273..22942288,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.89e-21!53;CL:0000051!2.89e-21!53;CL:0000838!5.56e-20!52;CL:0000791!1.66e-15!18;CL:0000789!1.66e-15!18;CL:0002420!1.66e-15!18;CL:0002419!1.66e-15!18;CL:0000790!1.66e-15!18;CL:0000625!5.11e-14!11;CL:0000084!4.41e-10!25;CL:0000827!4.41e-10!25;CL:0000037!5.08e-09!172;CL:0000566!5.08e-09!172;CL:0002087!5.25e-09!119;CL:0000738!1.16e-08!140;CL:0000988!6.87e-08!182;CL:0000945!7.38e-08!24;CL:0000826!7.38e-08!24;CL:0002032!1.70e-07!165;CL:0000837!1.70e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.35e-09;3!CL:0000946;4.88e-08;1!CL:0000786;4.88e-08;1!CL:0000817;9.43e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.58e-10,53;CL:0000051,2.58e-10,53;CL:0000817,9.54e-10,3;CL:0000623,4.93e-09,3;CL:0000825,4.93e-09,3;CL:0000838,1.80e-08,52;CL:0000946,4.89e-08,1;CL:0000786,4.89e-08,1;CL:0000980,4.89e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.72e-20;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;5.22e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.64e-10!15;UBERON:0000179!8.64e-10!15;UBERON:0000463!8.64e-10!15;UBERON:0002680!1.78e-08!9;UBERON:0001895!1.78e-08!9;UBERON:0010092!1.78e-08!9;UBERON:0007023!2.24e-08!115;UBERON:0002037!1.29e-07!6;UBERON:0006215!1.29e-07!6;UBERON:0004733!1.47e-07!12;UBERON:0002028!1.47e-07!12;UBERON:0007277!1.47e-07!12;UBERON:0004732!7.40e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.82e-14;2!UBERON:0005058;1.82e-14;2!UBERON:0009113;1.82e-14;2!UBERON:0004177;2.59e-12;5!UBERON:0005057;2.59e-12;5!UBERON:0002037;3.48e-10;6!UBERON:0002680;6.18e-07;9!UBERON:0001895;6.18e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.17e-10,6;UBERON:0006215,3.17e-10,6;UBERON:0004177,7.67e-09,7;UBERON:0005057,7.67e-09,7;UBERON:0002370,1.19e-07,4;UBERON:0005058,1.19e-07,4;UBERON:0009113,1.19e-07,4;UBERON:0003295,1.19e-07,4;UBERON:0005562,1.19e-07,4;UBERON:0002680,5.82e-07,9;UBERON:0001895,5.82e-07,9;UBERON:0010092,5.82e-07,9 | |||
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|short_description=p1@uc001wec.2 | |||
}} |
Revision as of 03:51, 11 September 2013
Short description: | p1@uc001wec.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc001wec.2_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -11bp_to_uc001wec.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.58e-10 | 53 |
common lymphoid progenitor | 2.58e-10 | 53 |
precursor B cell | 9.54e-10 | 3 |
natural killer cell | 4.93e-09 | 3 |
pro-NK cell | 4.93e-09 | 3 |
lymphoid lineage restricted progenitor cell | 1.80e-08 | 52 |
antibody secreting cell | 4.89e-08 | 1 |
plasma cell | 4.89e-08 | 1 |
plasmablast | 4.89e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.17e-10 | 6 |
rhombic lip | 3.17e-10 | 6 |
hemopoietic organ | 7.67e-09 | 7 |
immune organ | 7.67e-09 | 7 |
thymus | 1.19e-07 | 4 |
hemolymphoid system gland | 1.19e-07 | 4 |
thymic region | 1.19e-07 | 4 |
pharyngeal gland | 1.19e-07 | 4 |
thymus primordium | 1.19e-07 | 4 |
regional part of metencephalon | 5.82e-07 | 9 |
metencephalon | 5.82e-07 | 9 |
future metencephalon | 5.82e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.22e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.