FFCP PHASE1:Hg19::chr14:52327712..52327727,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54331 | |EntrezGene=54331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4404 | |HGNC=4404 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-314bp_to_ENST00000554736_5end | |association_with_transcript=-314bp_to_ENST00000554736_5end | ||
|cluster_id=chr14:52327712..52327727,+ | |||
|coexpression_cluster_id=C75 | |||
|description=CAGE_peak_15_at_GNG2_5end | |description=CAGE_peak_15_at_GNG2_5end | ||
|id=chr14:52327712..52327727,+ | |id=chr14:52327712..52327727,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.61e-35!140;CL:0000094!7.30e-29!8;CL:0000037!1.57e-27!172;CL:0000566!1.57e-27!172;CL:0000988!1.32e-25!182;CL:0000766!4.79e-24!76;CL:0002032!1.28e-23!165;CL:0000837!1.28e-23!165;CL:0000081!9.93e-21!11;CL:0002031!3.78e-19!124;CL:0002087!1.75e-18!119;CL:0000623!1.19e-15!3;CL:0000825!1.19e-15!3;CL:0000767!4.33e-15!3;CL:0000763!9.55e-15!112;CL:0000049!9.55e-15!112;CL:0002057!2.45e-13!42;CL:0000860!2.78e-12!45;CL:0000839!3.90e-11!70;CL:0000771!3.94e-11!2;CL:0000557!6.18e-11!71;CL:0000134!6.52e-11!358;CL:0002320!1.50e-10!365;CL:0000034!2.88e-10!444;CL:0000048!5.30e-10!430;CL:0000723!9.48e-10!436;CL:0000219!2.84e-09!390;CL:0000791!5.38e-09!18;CL:0000789!5.38e-09!18;CL:0002420!5.38e-09!18;CL:0002419!5.38e-09!18;CL:0000790!5.38e-09!18;CL:0000838!6.56e-09!52;CL:0000542!1.06e-08!53;CL:0000051!1.06e-08!53;CL:0002393!1.46e-08!9;CL:0002397!1.46e-08!9;CL:0002274!1.67e-08!5;CL:0000457!1.67e-08!5;CL:0002191!1.67e-08!5;CL:0000097!1.67e-08!5;CL:0000831!1.67e-08!5;CL:0002028!1.67e-08!5;CL:0002194!6.39e-08!63;CL:0000576!6.39e-08!63;CL:0000040!6.39e-08!63;CL:0000559!6.39e-08!63;CL:0002009!1.31e-07!65;CL:0000624!1.59e-07!6;CL:0000775!3.23e-07!3;CL:0000842!7.58e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.61e-35!140;CL:0000094!7.30e-29!8;CL:0000037!1.57e-27!172;CL:0000566!1.57e-27!172;CL:0000988!1.32e-25!182;CL:0000766!4.79e-24!76;CL:0002032!1.28e-23!165;CL:0000837!1.28e-23!165;CL:0000081!9.93e-21!11;CL:0002031!3.78e-19!124;CL:0002087!1.75e-18!119;CL:0000623!1.19e-15!3;CL:0000825!1.19e-15!3;CL:0000767!4.33e-15!3;CL:0000763!9.55e-15!112;CL:0000049!9.55e-15!112;CL:0002057!2.45e-13!42;CL:0000860!2.78e-12!45;CL:0000839!3.90e-11!70;CL:0000771!3.94e-11!2;CL:0000557!6.18e-11!71;CL:0000134!6.52e-11!358;CL:0002320!1.50e-10!365;CL:0000034!2.88e-10!444;CL:0000048!5.30e-10!430;CL:0000723!9.48e-10!436;CL:0000219!2.84e-09!390;CL:0000791!5.38e-09!18;CL:0000789!5.38e-09!18;CL:0002420!5.38e-09!18;CL:0002419!5.38e-09!18;CL:0000790!5.38e-09!18;CL:0000838!6.56e-09!52;CL:0000542!1.06e-08!53;CL:0000051!1.06e-08!53;CL:0002393!1.46e-08!9;CL:0002397!1.46e-08!9;CL:0002274!1.67e-08!5;CL:0000457!1.67e-08!5;CL:0002191!1.67e-08!5;CL:0000097!1.67e-08!5;CL:0000831!1.67e-08!5;CL:0002028!1.67e-08!5;CL:0002194!6.39e-08!63;CL:0000576!6.39e-08!63;CL:0000040!6.39e-08!63;CL:0000559!6.39e-08!63;CL:0002009!1.31e-07!65;CL:0000624!1.59e-07!6;CL:0000775!3.23e-07!3;CL:0000842!7.58e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;5.38e-39;8!CL:0000623;1.73e-38;3!CL:0000081;2.12e-28;11!CL:0000771;1.29e-26;2!CL:0002393;5.10e-19;6!CL:0002397;5.10e-19;6!CL:0000767;1.94e-17;3!CL:0000791;2.65e-11;18!CL:0000789;2.65e-11;18!CL:0002419;2.65e-11;18!CL:0000625;7.85e-11;11!CL:0000084;3.36e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.42e-39,8;CL:0000623,1.62e-38,3;CL:0000825,1.62e-38,3;CL:0000081,1.84e-28,11;CL:0000771,1.29e-26,2;CL:0000738,9.44e-19,136;CL:0000767,1.79e-17,3;CL:0002032,1.36e-15,161;CL:0000837,1.36e-15,161;CL:0000037,7.13e-15,168;CL:0000988,4.95e-14,177;CL:0002393,7.22e-13,9;CL:0002397,7.22e-13,9;CL:0000791,2.65e-11,18;CL:0000789,2.65e-11,18;CL:0002420,2.65e-11,18;CL:0002419,2.65e-11,18;CL:0000790,2.65e-11,18;CL:0000838,3.19e-11,52;CL:0000542,5.33e-11,53;CL:0000051,5.33e-11,53;CL:0000625,7.99e-11,11;CL:0000766,4.20e-10,72;CL:0002087,1.64e-09,115;CL:0002031,4.58e-09,120;CL:0000084,3.36e-08,25;CL:0000827,3.36e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.65e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.55e-10!102;UBERON:0003061!3.55e-10!102;UBERON:0002384!4.68e-10!375;UBERON:0002371!2.29e-09!80;UBERON:0002193!6.24e-09!112;UBERON:0001474!1.67e-08!86;UBERON:0004765!8.39e-07!101;UBERON:0001434!8.39e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!3.55e-10!102;UBERON:0003061!3.55e-10!102;UBERON:0002384!4.68e-10!375;UBERON:0002371!2.29e-09!80;UBERON:0002193!6.24e-09!112;UBERON:0001474!1.67e-08!86;UBERON:0004765!8.39e-07!101;UBERON:0001434!8.39e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,3.0706351847777,0.619264493264304,0,0,0,0,0,0,2.76997704265939,2.4065333696417,1.73608696572681,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0,0,0,0,0,0,0.736555271975129,0.632924774881769,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,1.12101712596307,0,0.590129310341499,0,1.85041349099558,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,3.42731463482045,2.67440195783507,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,3.34952292343276,4.74380664690938,4.2353201972317,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,3.0706351847777,0.619264493264304,0,0,0,0,0,0,2.76997704265939,2.4065333696417,1.73608696572681,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0,0,0,0,0,0,0.736555271975129,0.632924774881769,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,1.12101712596307,0,0.590129310341499,0,1.85041349099558,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,3.42731463482045,2.67440195783507,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,3.34952292343276,4.74380664690938,4.2353201972317,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@GNG2 | |short_description=p15@GNG2 | ||
}} | }} |
Latest revision as of 05:42, 20 September 2015
Short description: | p15@GNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GNG2_5end |
Coexpression cluster: | C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral |
Association with transcript: | -314bp_to_ENST00000554736_5end |
EntrezGene: | GNG2 |
HGNC: | 4404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.42e-39 | 8 |
natural killer cell | 1.62e-38 | 3 |
pro-NK cell | 1.62e-38 | 3 |
blood cell | 1.84e-28 | 11 |
eosinophil | 1.29e-26 | 2 |
leukocyte | 9.44e-19 | 136 |
basophil | 1.79e-17 | 3 |
hematopoietic oligopotent progenitor cell | 1.36e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-15 | 161 |
hematopoietic stem cell | 7.13e-15 | 168 |
hematopoietic cell | 4.95e-14 | 177 |
intermediate monocyte | 7.22e-13 | 9 |
CD14-positive, CD16-positive monocyte | 7.22e-13 | 9 |
mature alpha-beta T cell | 2.65e-11 | 18 |
alpha-beta T cell | 2.65e-11 | 18 |
immature T cell | 2.65e-11 | 18 |
mature T cell | 2.65e-11 | 18 |
immature alpha-beta T cell | 2.65e-11 | 18 |
lymphoid lineage restricted progenitor cell | 3.19e-11 | 52 |
lymphocyte | 5.33e-11 | 53 |
common lymphoid progenitor | 5.33e-11 | 53 |
CD8-positive, alpha-beta T cell | 7.99e-11 | 11 |
myeloid leukocyte | 4.20e-10 | 72 |
nongranular leukocyte | 1.64e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.58e-09 | 120 |
T cell | 3.36e-08 | 25 |
pro-T cell | 3.36e-08 | 25 |