FFCP PHASE1:Hg19::chr15:49218029..49218038,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:49218029..49218038,- | |||
|id=chr15:49218029..49218038,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000128;8.16e-11;7!CL:0000126;8.16e-11;7!CL:0000127;8.16e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,8.16e-11,7;CL:0000126,8.16e-11,7;CL:0000127,8.16e-11,7;CL:0002453,8.16e-11,7 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.32e-07;10 | |||
|ontology_enrichment_disease=DOID:171!4.69e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;6.34e-08;10!DOID:3093;7.48e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.13e-08,10;DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.34e-10!94;UBERON:0001016!2.34e-10!94;UBERON:0001017!1.76e-09!82;UBERON:0005743!6.58e-09!86;UBERON:0000955!1.44e-08!69;UBERON:0006238!1.44e-08!69;UBERON:0001869!6.94e-08!32;UBERON:0002780!1.29e-07!41;UBERON:0001890!1.29e-07!41;UBERON:0006240!1.29e-07!41;UBERON:0000200!2.03e-07!6;UBERON:0003080!2.09e-07!42;UBERON:0001893!2.29e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.96e-34;2!UBERON:0002757;5.96e-34;2!UBERON:0010134;5.96e-34;2!UBERON:0005408;5.96e-34;2!UBERON:0001899;5.96e-34;2!UBERON:0002346;9.45e-18;4!UBERON:0003296;9.45e-18;4!UBERON:0010133;9.45e-18;4!UBERON:0000923;9.45e-18;4!UBERON:0010316;9.45e-18;4!UBERON:0002784;9.45e-18;4!UBERON:0005291;9.45e-18;4!UBERON:0002050;1.71e-14;5!UBERON:0005423;1.71e-14;5!UBERON:0001894;9.43e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.05e-34,2;UBERON:0002757,7.05e-34,2;UBERON:0010134,7.05e-34,2;UBERON:0005408,7.05e-34,2;UBERON:0001899,7.05e-34,2;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55671706255387,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,1.93458368795583,0,1.60710550763486,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:49218029..49218038,- | |||
}} |
Revision as of 23:26, 11 January 2014
Short description: | p@chr15:49218029..49218038, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:49218029..49218038, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 8.16e-11 | 7 |
macroglial cell | 8.16e-11 | 7 |
astrocyte | 8.16e-11 | 7 |
oligodendrocyte precursor cell | 8.16e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.05e-34 | 2 |
regional part of epithalamus | 7.05e-34 | 2 |
secretory circumventricular organ | 7.05e-34 | 2 |
circumventricular organ | 7.05e-34 | 2 |
epithalamus | 7.05e-34 | 2 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.13e-08 | 10 |
nervous system cancer | 7.48e-07 | 11 |